##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527964_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2033804 Sequences flagged as poor quality 0 Sequence length 59 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33580128665299 31.0 31.0 33.0 30.0 34.0 2 31.9190806980417 31.0 31.0 34.0 30.0 34.0 3 32.16134003079943 33.0 31.0 34.0 30.0 34.0 4 35.8413106671046 37.0 35.0 37.0 35.0 37.0 5 35.699733602648045 37.0 35.0 37.0 33.0 37.0 6 35.691941308011984 37.0 35.0 37.0 33.0 37.0 7 35.42821333815844 37.0 35.0 37.0 32.0 37.0 8 35.317787259735944 37.0 35.0 37.0 32.0 37.0 9 37.44351717274624 39.0 37.0 39.0 34.0 39.0 10 37.626064753535736 39.0 37.0 39.0 35.0 39.0 11 37.756178569813024 39.0 37.0 39.0 35.0 39.0 12 37.86371302249381 39.0 37.0 39.0 35.0 39.0 13 37.89400158520684 39.0 38.0 39.0 35.0 39.0 14 38.29821261045804 40.0 38.0 40.0 35.0 40.0 15 37.55531309801731 40.0 37.0 40.0 32.0 40.0 16 36.98846004826424 39.0 36.0 40.0 32.0 40.0 17 36.88261258213672 39.0 36.0 40.0 31.0 40.0 18 36.88335847505463 39.0 36.0 40.0 31.0 40.0 19 37.11055391768332 39.0 36.0 40.0 32.0 40.0 20 37.23628530576201 39.0 36.0 40.0 32.0 40.0 21 37.23492135918702 40.0 36.0 40.0 32.0 40.0 22 37.20858302963314 40.0 36.0 40.0 32.0 40.0 23 37.10597678045672 39.0 36.0 40.0 32.0 40.0 24 37.07456814914318 39.0 36.0 40.0 31.0 40.0 25 37.01747464357431 39.0 36.0 40.0 31.0 40.0 26 36.83851147898224 39.0 36.0 40.0 31.0 40.0 27 36.681261321149925 39.0 35.0 40.0 30.0 40.0 28 36.67157995559061 39.0 35.0 40.0 30.0 40.0 29 36.62261604363056 39.0 35.0 40.0 30.0 40.0 30 36.59713669557145 39.0 35.0 40.0 30.0 40.0 31 36.56813045898228 39.0 35.0 40.0 30.0 40.0 32 36.42417755103245 39.0 35.0 40.0 30.0 40.0 33 36.28178624882241 39.0 35.0 40.0 30.0 40.0 34 36.17886040149395 39.0 35.0 40.0 30.0 40.0 35 36.02410851783161 38.0 35.0 40.0 30.0 40.0 36 35.80799182222082 38.0 35.0 40.0 29.0 40.0 37 35.6699504967047 38.0 35.0 40.0 28.0 40.0 38 35.47289955177588 38.0 34.0 40.0 28.0 40.0 39 35.28591201512044 38.0 34.0 40.0 27.0 40.0 40 35.10706587262096 38.0 34.0 40.0 27.0 40.0 41 34.89354923089934 37.0 33.0 40.0 26.0 40.0 42 34.7704778828245 37.0 33.0 40.0 26.0 40.0 43 34.52848553744609 37.0 33.0 40.0 25.0 40.0 44 34.361469935155995 36.0 33.0 40.0 25.0 40.0 45 34.11944169644666 36.0 33.0 40.0 24.0 40.0 46 33.90611189672161 36.0 33.0 39.0 23.0 40.0 47 33.72115356248685 35.0 33.0 39.0 23.0 40.0 48 33.49400925556248 35.0 32.0 39.0 23.0 40.0 49 33.38081840728015 35.0 32.0 39.0 23.0 40.0 50 33.13839190010444 35.0 32.0 39.0 23.0 40.0 51 32.936777585254035 35.0 32.0 38.0 22.0 40.0 52 32.77974377078617 35.0 31.0 38.0 22.0 40.0 53 32.52164220347684 35.0 31.0 38.0 21.0 40.0 54 32.288107900269644 35.0 31.0 37.0 20.0 40.0 55 32.0959281228673 35.0 31.0 37.0 20.0 40.0 56 31.838420024741815 35.0 31.0 37.0 20.0 39.0 57 31.6874585751626 34.0 30.0 36.0 20.0 39.0 58 31.454976487409798 34.0 30.0 36.0 20.0 39.0 59 30.875225439619552 34.0 29.0 35.0 18.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 6.0 14 22.0 15 59.0 16 182.0 17 592.0 18 1270.0 19 2389.0 20 4105.0 21 6147.0 22 8917.0 23 12386.0 24 16683.0 25 21749.0 26 27565.0 27 34497.0 28 41683.0 29 49144.0 30 57560.0 31 68743.0 32 84099.0 33 105548.0 34 144935.0 35 194743.0 36 252975.0 37 365022.0 38 439111.0 39 93669.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.128612196652185 22.759813630025313 33.564837122947935 11.546737050374569 2 26.696328653105216 21.699534468414853 34.15343858110221 17.450698297377723 3 19.07111009713817 22.569431469305794 36.28584662042164 22.073611813134402 4 20.300677941433882 25.054479192685235 32.561446432399585 22.0833964334813 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 100.0 0.0 0.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.4794483637558 0.3809609972249047 0.09642030402142979 0.043170334997866065 12 99.36070535803843 0.4117407577131326 0.12341405563171279 0.10413982861672019 13 97.9511300007277 1.0688837272421532 0.429195733708853 0.5507905383212935 14 64.20756375737288 22.48589342925867 5.1302387054013066 8.17630410796714 15 33.73569921192013 26.711325181777596 17.238976813891604 22.313998792410676 16 27.7866500410069 18.929454362367267 28.01582650048874 25.26806909613709 17 22.80052551769984 17.45581186781027 29.815655785906607 29.928006828583285 18 24.037468703965573 19.585023925609352 30.980959817170188 25.396547553254884 19 25.61884036023137 18.746890064135975 28.981553778043505 26.65271579758915 20 28.3725472071055 19.017614283382272 25.294571158282707 27.315267351229515 21 30.351449795555517 18.856438476864042 20.279486125506686 30.51262560207375 22 30.228724105174344 20.289811604264717 21.80480518280031 27.67665910776063 23 29.96876788520428 19.661481637365252 21.382788115275613 28.986962362154863 24 29.576350523452604 21.179671197421186 20.957870079909373 28.286108199216837 25 32.045270832390926 19.448186747592196 22.10212980208516 26.404412617931715 26 32.14469044214683 18.59938322473552 20.875905446149186 28.38002088696846 27 29.839404387050077 22.158379076843197 20.687293367502473 27.31492316860425 28 31.199220770536396 20.19009698083001 20.100265315635134 28.51041693299846 29 29.876379434793126 20.62942151751103 20.95924681041044 28.534952237285406 30 31.106832320125243 19.473902106594345 20.61845684244893 28.800808730831484 31 30.897323439230135 19.325116874585753 20.397344090187648 29.380215595996468 32 31.912121325358783 21.081087459755217 19.304957606534355 27.701833608351638 33 30.666721080300757 22.04179950477037 19.845275159258218 27.446204255670654 34 30.063811458724636 22.24054038638925 20.69122688321982 27.004421271666295 35 31.769924732176747 23.045927729515725 19.183854491386583 26.00029304692094 36 32.22218070177854 23.529700993802745 19.132964631793428 25.11515367262529 37 31.636283535679937 22.633596944444992 19.007042959891905 26.723076559983166 38 30.737180180587707 23.9377049115844 21.022428906620302 24.30268600120759 39 30.66524601190675 24.107927804252522 22.272106850020947 22.954719333819778 40 31.12723743290897 24.087080170950593 20.10282210085141 24.682860295289025 41 31.202908441521405 25.089536651516077 19.062308855720612 24.64524605124191 42 33.57014736916635 23.119828656055354 17.639900403382036 25.670123571396257 43 31.99964205006972 24.126612003909916 18.519729531459276 25.354016414561087 44 31.575609055739882 25.145490912595314 18.602431699416464 24.676468332248337 45 29.299971875362623 22.622681438329355 20.531919496667328 27.54542718964069 46 30.176113332454847 20.92915541517275 21.098837449429737 27.79589380294266 47 30.18688133173108 21.14702301696722 22.39891356295887 26.267182088342828 48 28.843929896882887 21.369168317104304 23.126613970667773 26.66028781534504 49 29.963654314771727 20.921681735309793 21.89301427276178 27.221649677156694 50 30.185307925444143 22.13423712412799 20.958607614106377 26.721847336321492 51 28.828195834013503 22.289856839695467 21.56943343606365 27.312513890227375 52 29.32258959073736 22.355054862710467 21.546029017545447 26.776326529006727 53 28.089579920188967 22.074988543635474 21.968537774534813 27.86689376164075 54 27.58451650208181 22.937313526770524 22.904567008423623 26.573602962724035 55 28.537017333037006 22.877179905241608 21.44306924364393 27.142733518077456 56 29.492124118154944 22.760797008954647 21.21502366993083 26.532055202959576 57 29.450969709962216 21.96794774717721 21.718562850697513 26.862519692163062 58 28.555554025855002 23.365132529978307 20.904030083528205 27.175283360638485 59 28.91773248552958 23.25941929507465 21.99218803778535 25.83066018161042 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 1.0 7 2.0 8 11.0 9 62.0 10 104.0 11 183.5 12 263.0 13 341.5 14 525.5 15 631.0 16 763.0 17 895.0 18 974.5 19 1081.5 20 1109.0 21 1354.0 22 1599.0 23 2304.5 24 3010.0 25 4332.0 26 6975.0 27 8296.0 28 8963.5 29 9631.0 30 10478.5 31 12688.5 32 14051.0 33 14153.0 34 14255.0 35 15719.0 36 18358.0 37 19533.0 38 20527.0 39 21521.0 40 24642.5 41 27764.0 42 31100.5 43 38233.5 44 42030.0 45 43557.0 46 45084.0 47 46599.5 48 52910.0 49 57705.0 50 68078.0 51 78451.0 52 87438.0 53 102876.0 54 109327.0 55 121870.0 56 134413.0 57 150607.0 58 171776.0 59 176751.0 60 176089.5 61 175428.0 62 162242.0 63 149056.0 64 143101.5 65 122259.5 66 107372.0 67 98043.5 68 88715.0 69 79220.5 70 65017.0 71 60308.0 72 51733.5 73 43159.0 74 34980.5 75 21513.5 76 16225.0 77 10985.5 78 5746.0 79 5159.5 80 4573.0 81 2854.0 82 765.5 83 396.0 84 262.0 85 128.0 86 73.0 87 11.0 88 4.0 89 4.0 90 4.0 91 3.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 2033804.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.142506864332095 #Duplication Level Percentage of deduplicated Percentage of total 1 82.69953472106023 11.695787374696646 2 6.5634106369374665 1.856461599726368 3 2.684594390284899 1.1390068377765485 4 1.5599964162487128 0.8824904010052355 5 0.987230463628791 0.6980956804273966 6 0.6120708681918214 0.5193729872916324 7 0.43319584747694106 0.4288532672579959 8 0.31607692851313346 0.35760961049231954 9 0.22546282116871802 0.28697485464272465 >10 1.545584279561 4.42179871217754 >50 0.44949961038869546 4.780689706235975 >100 1.7715367972762273 57.555442418884404 >500 0.14136083720403858 12.877928373294647 >1k 0.010445382059411718 2.4994881760905616 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAACAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCT 3875 0.19052966755891915 No Hit GCCAAGGACTGGGGACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCTA 3776 0.1856619418587042 No Hit ACAAAGGACTGGGGGACACAGGATCTGGAGCTGTGCTGATAACAGCGGAATCCCCTGTC 3746 0.18418687346469964 No Hit GGGCAGGACTGGGGAAGGAAAGAAAGAAAGAAAGAAAGGAAGTGAAAGAAAGAAAGAAA 3537 0.1739105636531347 No Hit GCTCAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCT 2674 0.13147776285227092 No Hit CCTGAGGACTGGGACACAGGATCTGGAGCTGGTGCTGATAACAGCGGAATCCCCTGTCT 2256 0.11092514322914107 No Hit TTATAGGACTGGGGGACAACCAATGACCTTGACACTGCCTCTTAGGCACTTAGCTCTAG 2087 0.10261559127624884 No Hit TAATAGGACTGGGGATGTGGATTGTCTCAAAGCCTGCCAGGAGCAAATCGAAGCTCTGC 2075 0.10202556391864703 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.002851798895075435 0.0 0.0 0.0 0.0 12 0.006981990398288134 0.0 0.0 0.0 0.0 13 0.009735451400429933 0.0 0.0 0.0 0.0 14 0.038745129815852465 0.0 0.0 0.0 0.0 15 0.06706644298073954 0.0 0.0 0.0 0.0 16 0.08383305372592442 0.0 0.0 0.0 0.0 17 0.09627279718202934 0.0 0.0 0.0 0.0 18 0.11264605635547968 0.0 0.0 0.0 0.0 19 0.12877347079659593 0.0 0.0 0.0 0.0 20 0.14804769781158852 0.0 0.0 0.0 0.0 21 0.16707608009424704 0.0 0.0 0.0 0.0 22 0.18821872707497872 0.0 0.0 0.0 0.0 23 0.20705043357176994 0.0 0.0 0.0 0.0 24 0.22834058739190208 0.0 0.0 0.0 0.0 25 0.24967991015850102 0.0 0.0 0.0 0.0 26 0.27628031019704946 0.0 0.0 0.0 0.0 27 0.3041591028437352 0.0 0.0 0.0 0.0 28 0.3309561786681509 0.0 0.0 0.0 0.0 29 0.36237513546044753 0.0 0.0 0.0 0.0 30 0.40185779947330225 0.0 0.0 0.0 0.0 31 0.43883284721634924 0.0 0.0 0.0 0.0 32 0.4751686986553276 0.0 0.0 0.0 0.0 33 0.5019657744797433 0.0 0.0 0.0 0.0 34 0.5278778092677564 0.0 0.0 0.0 0.0 35 0.5514789035718289 0.0 0.0 0.0 0.0 36 0.5764567283769724 0.0 0.0 0.0 0.0 37 0.6000086537345781 0.0 0.0 0.0 0.0 38 0.6246914648609208 0.0 0.0 0.0 0.0 39 0.6498167965054646 0.0 0.0 0.0 0.0 40 0.6770072239016149 0.0 0.0 0.0 0.0 41 0.7048368476018338 0.0 0.0 0.0 0.0 42 0.7274053940301032 0.0 0.0 0.0 0.0 43 0.7516456846382444 0.0 0.0 0.0 0.0 44 0.7731816831907106 0.0 0.0 0.0 0.0 45 0.7959469054048472 0.0 0.0 0.0 0.0 46 0.8184662828866498 0.0 0.0 0.0 0.0 47 0.8396580988138483 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 50 3.6379788E-12 53.0 20 AGGTATA 15 0.0066970037 53.0 30 TGATACG 20 3.13882E-4 53.0 45 GATACGC 25 1.4791383E-5 53.0 48 TCGTTAA 55 0.0 53.0 45 CGAACAA 25 1.4791383E-5 53.0 29 CGTATTA 20 3.13882E-4 53.0 51 TTAATCG 15 0.0066970037 53.0 24 GTATTAG 20 3.13882E-4 53.0 52 CGTATAG 70 0.0 53.0 25 CGTATAC 25 1.4791383E-5 53.0 42 CGACGTT 15 0.0066970037 53.0 44 TTTACGG 15 0.0066970037 53.0 35 CCGATTA 35 3.3438482E-8 53.0 33 TAGACGC 20 3.13882E-4 53.0 31 TAGACCT 35 3.3438482E-8 53.0 50 CGCATTA 30 7.013168E-7 53.0 40 ATAATCG 80 0.0 53.0 42 CGTTGTA 15 0.0066970037 53.0 17 TATGGAT 25 1.4791383E-5 53.0 17 >>END_MODULE