SRR1527961_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527961_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	805854
Sequences flagged as poor quality	0
Sequence length	59
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAAAGTTTGGGCCGAGGCAGGCAGATCATGAGGTCGGGAGATCGAGACCATCCTGG	1673	0.20760584423481176	No Hit
TTCCAAAGTTGGGTGGTATCAAGCAGAGTAGAAAAAGTTGGGACACAGGATCTGGAGCT	1594	0.19780257962360429	No Hit
GCATAAAGTTGGGGTTTGAGACCAGCCTGGCCAACGTGGAGAAACCCCATCTCTACTAA	1268	0.1573486016077354	No Hit
TTGCAAAGTTGGGAGCCACCACCGTGCCATGGAGCCAGGCAGAGGCTGAGCGACATGAG	1183	0.14680078525390455	No Hit
TAAAAAAGTTGGGCTCGTGGATGAAGTTTCCTTTGGCATGTGGAAACTCGTTGTTTGAA	1134	0.14072027935581383	No Hit
ATTTAAAGTTGGGATTACTGCTTGGGCTCCAAGGGCTGGAAGTGGTGATGGGCAGATGT	1084	0.1345156815006192	No Hit
GAAAAAAGTTGGGGTTTTGCAGCAGCAGTCGCTTCACGTTCGCTCGCGTATCGGTGATT	1053	0.13066883083039854	No Hit
GCACAAAGTTGGGGGCCACTTGGAGCAGCTCTGCCGCGGGGACTGCACTGTCCGCCCTG	1052	0.13054473887329465	No Hit
GCGCAAAGTTGGGGCTTTTCCTCAGCTGCCGTGCCGGCAGTCTACAGCATGGCTTCCGT	1029	0.12769062385990515	No Hit
CTGCAAAGTTGGGCTAGCACGATGAAGATTAAGATCATTGCTCTCCCTGAGCGCAAGTA	970	0.12036919839077549	No Hit
GACGAAAGTTGGGTATATCCAGAATCTACAAGGAACTCAAACAAATTTACAAGAAAAAA	947	0.11751508337738599	No Hit
CCTTAAAGTTGGGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCA	845	0.10485770375278897	No Hit
CTGCAAAGTTGGGCAACCTGGCCTCCAGGATCCTCAGCCTATGTGCTTTCTTTTTTTGT	834	0.10349269222464615	No Hit
GTGGAAAGTTGGCCTGTGGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCC	812	0.10076266916836053	No Hit
GCCCAAAGTTGGGCAGCCAGCCCGTGCACCTACGACGCCTGCAGGAGCAGAAGTGAGGG	812	0.10076266916836053	No Hit
GCCCAAAGTTGGGGTGCCCATGCTGGAGTGCAATAGTGTGATCTCGGCTCACTGCAACC	806	0.10001811742573717	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGATG	75	0.0	53.000004	24
TGTTTAC	45	7.6397555E-11	53.000004	48
CTCACTT	45	7.6397555E-11	53.000004	26
ATCTAAT	45	7.6397555E-11	53.000004	44
GTTTCGC	45	7.6397555E-11	53.000004	48
CGTGCCA	175	0.0	53.000004	23
GACGTAG	45	7.6397555E-11	53.000004	53
CTATAAC	75	0.0	53.000004	16
GGACTAT	90	0.0	53.000004	12
GGTCCCT	45	7.6397555E-11	53.000004	13
GCCGGAC	75	0.0	53.000004	19
CTAAGGC	45	7.6397555E-11	53.000004	28
TGACGTA	45	7.6397555E-11	53.000004	52
TACGGGC	90	0.0	53.000004	50
TGACGGT	45	7.6397555E-11	53.000004	46
CATTCCG	75	0.0	53.000004	13
TTTCAGG	45	7.6397555E-11	53.000004	26
CCCGTCA	75	0.0	53.000004	44
TCTACGG	90	0.0	53.000004	48
TGCGATT	45	7.6397555E-11	53.000004	21