##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527959_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8100837 Sequences flagged as poor quality 0 Sequence length 52 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.341265229753418 31.0 31.0 33.0 30.0 34.0 2 31.982461441947294 33.0 31.0 34.0 30.0 34.0 3 32.30371935640724 34.0 31.0 34.0 30.0 34.0 4 35.93182087233702 37.0 35.0 37.0 35.0 37.0 5 35.54732257913596 37.0 35.0 37.0 33.0 37.0 6 35.89544352021896 37.0 35.0 37.0 35.0 37.0 7 36.267102522862764 37.0 36.0 37.0 35.0 37.0 8 36.085198850439774 37.0 36.0 37.0 35.0 37.0 9 37.123795726293466 39.0 37.0 39.0 34.0 39.0 10 37.49608787338889 39.0 37.0 39.0 35.0 39.0 11 37.981375381334054 39.0 37.0 39.0 35.0 39.0 12 38.07101266202493 39.0 38.0 39.0 37.0 39.0 13 38.120311765315115 39.0 39.0 39.0 37.0 39.0 14 38.78453781998083 40.0 39.0 40.0 36.0 40.0 15 38.20896692526957 40.0 38.0 40.0 34.0 40.0 16 37.763110651405526 40.0 37.0 40.0 33.0 40.0 17 37.755164188589404 40.0 37.0 40.0 33.0 40.0 18 37.76679014773412 40.0 37.0 40.0 33.0 40.0 19 37.90064384704939 40.0 38.0 40.0 33.0 40.0 20 37.911074250722486 40.0 38.0 40.0 34.0 40.0 21 37.90405176650265 40.0 37.0 40.0 34.0 40.0 22 37.852955441517956 40.0 37.0 40.0 34.0 40.0 23 37.76516352569494 40.0 37.0 40.0 33.0 40.0 24 37.74604192134714 40.0 37.0 40.0 33.0 40.0 25 37.70262961716178 40.0 37.0 40.0 33.0 40.0 26 37.68652054102557 40.0 37.0 40.0 33.0 40.0 27 37.71412052853304 40.0 37.0 40.0 33.0 40.0 28 37.51236372241535 40.0 37.0 40.0 33.0 40.0 29 37.60451407675528 40.0 37.0 40.0 33.0 40.0 30 37.60549076595419 40.0 37.0 40.0 33.0 40.0 31 37.60031191838572 40.0 37.0 40.0 33.0 40.0 32 37.53953251991121 40.0 36.0 40.0 33.0 40.0 33 37.461657604022896 40.0 36.0 40.0 33.0 40.0 34 37.37636012179976 40.0 36.0 40.0 33.0 40.0 35 37.20728709885164 40.0 36.0 40.0 33.0 40.0 36 36.75283615754767 40.0 35.0 40.0 31.0 40.0 37 36.8559115558059 39.0 35.0 40.0 32.0 40.0 38 36.77324367840014 39.0 35.0 40.0 31.0 40.0 39 36.68976168758858 39.0 35.0 40.0 31.0 40.0 40 36.55035695694161 39.0 35.0 40.0 31.0 40.0 41 36.40411626601054 39.0 35.0 40.0 31.0 40.0 42 36.08221705979271 39.0 35.0 40.0 30.0 40.0 43 35.90541644030117 38.0 35.0 40.0 30.0 40.0 44 35.7013566622807 38.0 35.0 40.0 30.0 40.0 45 35.26712227390824 38.0 35.0 40.0 28.0 40.0 46 35.262809633128036 37.0 35.0 40.0 28.0 40.0 47 35.19050809194161 37.0 35.0 40.0 28.0 40.0 48 35.01926331809911 37.0 34.0 40.0 28.0 40.0 49 34.87219012060112 37.0 34.0 40.0 27.0 40.0 50 34.63605452127972 36.0 34.0 40.0 27.0 40.0 51 34.5422677928219 36.0 34.0 40.0 27.0 40.0 52 34.04192072991964 35.0 33.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 19.0 15 31.0 16 116.0 17 379.0 18 963.0 19 2168.0 20 4016.0 21 6981.0 22 11225.0 23 17515.0 24 25343.0 25 36621.0 26 50993.0 27 69576.0 28 91814.0 29 120291.0 30 152915.0 31 185597.0 32 222957.0 33 282082.0 34 406676.0 35 682713.0 36 723445.0 37 1361292.0 38 2556523.0 39 1088580.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.779430323064148 20.00700668338346 35.47117415151052 17.74238884204188 2 27.502071699504633 20.57919447089233 34.52028475576042 17.398449073842617 3 27.805237903194445 20.74417742265398 35.09848426773678 16.35210040641479 4 25.952737970162836 21.29703387440088 36.85921590571443 15.89101224972185 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.53641827381541 0.37523283087908077 0.07259743653649617 0.01575145876901362 12 98.91006324408205 0.9475070292119198 0.08608986947891928 0.056339857227098875 13 98.24839087615267 1.1099223450613807 0.2572450229525665 0.3844417558333787 14 63.64144840835583 22.854403810371693 4.7840118249509285 8.72013595632155 15 31.95235257788794 25.162004864435612 17.556235238408078 25.329407319268366 16 28.049817568233998 17.82054126011917 28.93050434171185 25.199136829934982 17 22.768745995012615 17.43779068755488 30.44403930112407 29.34942401630844 18 23.128795209680185 19.369912022671237 32.452807037099994 25.048485730548585 19 24.828619561163865 18.750753780134076 29.570969024558817 26.849657634143238 20 28.11550213885306 18.8744570468459 25.849304213873207 27.160736600427832 21 30.829283443180007 19.812360130193955 21.157134750396782 28.20122167622926 22 29.64150494572351 21.173923139053407 22.86035381282206 26.324218102401026 23 29.16797363037918 21.452128959019916 21.943818891800934 27.436078518799974 24 28.19040797882984 22.937913699535 22.481960814666436 26.389717506968722 25 31.40396480018052 20.30038377515805 22.99459920005797 25.30105222460346 26 29.768257280081055 20.37466005056021 22.5723465365369 27.28473613282183 27 31.350241956479312 22.499588622755894 20.213701374314777 25.936468046450017 28 31.35279724798808 21.494964038901166 19.74546580803934 27.406772905071414 29 30.600553992136863 20.98954712951267 19.434991717522525 28.97490716082795 30 30.12197381579212 20.77540876331668 19.995896720301864 29.106720700589335 31 29.28140635344224 20.352267302749087 20.933540571178018 29.432785772630655 32 29.64101116958655 22.802421527553264 19.19365863058348 28.362908672276703 33 31.314850551862726 22.212223255448787 20.329282023573615 26.14364416911487 34 29.57208002086698 22.742032706003094 20.598081408131037 27.087805864998888 35 30.847367994196155 22.701987461295666 20.02090648163887 26.42973806286931 36 33.491329352757006 21.852050596746977 20.372302269506225 24.28431778098979 37 33.18218845780997 21.953558626102463 20.522323804318 24.341929111769563 38 30.84633106430854 24.61061739669617 22.096580884172834 22.44647065482246 39 31.508583619198856 24.717976673274624 22.304337193798617 21.469102513727904 40 31.875064268050323 25.386450807490636 20.051310747272165 22.687174177186876 41 31.435208485246648 25.22204804268991 18.989568608774622 24.353174863288817 42 31.91847953489251 25.886460868179423 18.516308870305622 23.678750726622447 43 32.63847920900025 23.182456331364275 19.099668342913205 25.079396116722258 44 31.317405843371493 24.047329924055997 19.643118359251023 24.992145873321487 45 28.247599599893196 23.926144915642666 20.575157850972683 27.25109763349145 46 28.58379942714561 22.998364243102287 21.00712555998843 27.410710769763668 47 29.454215656974704 20.780099636617795 22.82244414990698 26.94324055650052 48 29.785712266522584 20.558073196633877 22.161598857006997 27.494615679836542 49 29.906156610730473 20.030584493923282 22.376379132181032 27.686879763165212 50 29.910489496332293 21.885652062867084 20.989880428405115 27.213978012395508 51 28.554086448104066 22.573346433214247 22.44279202260211 26.429775096079577 52 29.377976621428132 22.15703142774012 22.509698689160146 25.955293261671603 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.5 4 11.0 5 37.0 6 63.0 7 368.5 8 674.0 9 1313.5 10 1953.0 11 2893.0 12 3833.0 13 4342.5 14 5972.5 15 7093.0 16 8574.5 17 10056.0 18 12388.5 19 14721.0 20 19034.5 21 23348.0 22 29422.0 23 35496.0 24 42357.0 25 49218.0 26 54249.0 27 59280.0 28 63429.5 29 67579.0 30 69525.0 31 71471.0 32 78099.0 33 84727.0 34 89229.5 35 93732.0 36 102651.0 37 111570.0 38 127003.0 39 161873.0 40 181310.0 41 209137.5 42 236965.0 43 271517.0 44 306069.0 45 326638.0 46 347207.0 47 375815.5 48 404424.0 49 436621.5 50 468819.0 51 515308.5 52 561798.0 53 610505.0 54 659212.0 55 711020.5 56 762829.0 57 776495.0 58 790161.0 59 752080.5 60 714000.0 61 633356.5 62 552713.0 63 483606.0 64 365304.5 65 316110.0 66 272286.5 67 228463.0 68 200412.5 69 172362.0 70 137716.0 71 103070.0 72 80040.0 73 57010.0 74 42698.5 75 28387.0 76 18780.5 77 9174.0 78 6155.0 79 3136.0 80 1886.5 81 637.0 82 399.0 83 161.0 84 132.5 85 104.0 86 100.5 87 97.0 88 51.5 89 3.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 8100837.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.866902016616223 #Duplication Level Percentage of deduplicated Percentage of total 1 73.52062441403359 6.519001728796783 2 8.22350273813047 1.4583398602475621 3 3.9459026510394977 1.0496379652162025 4 2.322755113650842 0.8238256800534517 5 1.5512611795937938 0.6877440440819335 6 1.061741838414375 0.5648616508897342 7 0.7653729766036503 0.4750541032797328 8 0.5099849853065225 0.36175895157267185 9 0.40836098784012903 0.32588071799283297 >10 2.7586190719979347 5.189680334855543 >50 1.2116769881642702 8.114551478938832 >100 3.554127225256256 64.7047681627234 >500 0.15785436134834668 8.8134128084439 >1k 0.008215468620360019 0.9114825129074359 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.026478745344462554 0.0 0.0 0.0 0.0 11 0.02730582037387001 0.0 0.0 0.0 0.0 12 0.03225592614689075 0.0 0.0 0.0 0.0 13 0.04152657311830864 0.0 0.0 0.0 0.0 14 0.06284535783154259 0.0 0.0 0.0 0.0 15 0.09352120034016238 0.0 0.0 0.0 0.0 16 0.11366726672811711 0.0 0.0 0.0 0.0 17 0.13177650655111317 0.0 0.0 0.0 0.0 18 0.1561443589100731 0.0 0.0 0.0 0.0 19 0.18138866391213648 0.0 0.0 0.0 0.0 20 0.2041393994225535 0.0 0.0 0.0 0.0 21 0.22592727146589914 0.0 0.0 0.0 0.0 22 0.24857925174892423 0.0 0.0 0.0 0.0 23 0.27240395035722853 0.0 0.0 0.0 0.0 24 0.2977963882003798 0.0 0.0 0.0 0.0 25 0.3272131015597524 0.0 0.0 0.0 0.0 26 0.3600245258607228 0.0 0.0 0.0 0.0 27 0.3948233991129559 0.0 0.0 0.0 0.0 28 0.4299926044679087 0.0 0.0 0.0 0.0 29 0.46895154167402703 0.0 0.0 0.0 0.0 30 0.5101818491101598 0.0 0.0 0.0 0.0 31 0.5484124665142627 0.0 0.0 0.0 0.0 32 0.5821744098788805 0.0 0.0 0.0 0.0 33 0.6123317874436925 0.0 0.0 0.0 0.0 34 0.6410078365976256 0.0 0.0 0.0 0.0 35 0.6676840923968721 0.0 0.0 0.0 0.0 36 0.6930888746434474 0.0 0.0 0.0 0.0 37 0.7175184490195272 0.0 0.0 0.0 0.0 38 0.7425035215496868 0.0 0.0 0.0 0.0 39 0.7699451303612207 0.0 0.0 0.0 0.0 40 0.8014850811095199 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGGAT 40610 0.0 43.700565 9 CCGTTAT 2690 0.0 43.691452 1 TAGGGGC 155225 0.0 43.658882 9 CGTTATG 14985 0.0 43.344677 2 ACGTTAT 2220 0.0 43.306305 1 TCTTATG 20570 0.0 43.282936 2 CTTTATG 21115 0.0 43.276817 2 CATATGT 38485 0.0 43.238926 3 TAGGGCT 31875 0.0 43.207527 9 CGTATGT 36180 0.0 43.177444 3 CGGTATG 11775 0.0 43.12866 2 CTTATGT 53285 0.0 43.05189 3 ATATGTA 184395 0.0 42.9952 4 TTTATGT 117940 0.0 42.97728 3 CGCATAT 1900 0.0 42.973682 1 GTATGTA 225480 0.0 42.933743 4 TAATATG 13495 0.0 42.932194 2 TATATGT 60495 0.0 42.916607 3 TTATGTA 321450 0.0 42.865356 4 ATGTAGG 856745 0.0 42.850452 6 >>END_MODULE