SRR1527957_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527957_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11727621
Sequences flagged as poor quality	0
Sequence length	52
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	26233	0.22368560511974253	No Hit
CCAAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	14289	0.12184056766500212	No Hit
AAAAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	12136	0.10348219813720105	No Hit
GGGAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	11903	0.10149543543400662	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCAAAT	23315	0.0	42.15269	1
ACGACGT	45	1.5905243E-8	40.88889	16
GCAAATA	39470	0.0	40.341778	2
CGTTAAG	40	2.913639E-7	40.25	20
CCAAATA	23655	0.0	39.884167	2
ACCTAAT	2535	0.0	39.648914	1
GGCCAAT	6100	0.0	39.62787	1
GCCAAAT	9955	0.0	39.623306	1
CCGTTCG	105	0.0	39.428574	32
GGCTAAT	9420	0.0	39.11465	1
AGCGAAT	3705	0.0	39.047234	1
GCCGAAT	3730	0.0	38.970512	1
GCCTAAT	3760	0.0	38.843086	1
TAAAGGA	41055	0.0	38.81793	7
TGGGAAT	10595	0.0	38.814537	1
CCTAATA	10000	0.0	38.778	2
TAAAAGG	12515	0.0	38.777466	7
CCGACGC	95	0.0	38.73684	40
CAAATAA	107970	0.0	38.72742	3
TGCGAAT	7580	0.0	38.62665	1