##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527957_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11727621 Sequences flagged as poor quality 0 Sequence length 52 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.846253046547123 31.0 30.0 34.0 16.0 34.0 2 31.054248512976333 31.0 30.0 34.0 27.0 34.0 3 31.733160033053593 31.0 31.0 34.0 30.0 34.0 4 35.49243695716292 37.0 35.0 37.0 33.0 37.0 5 35.57638893685258 37.0 35.0 37.0 33.0 37.0 6 35.96954343937274 37.0 35.0 37.0 35.0 37.0 7 36.15832520508635 37.0 35.0 37.0 35.0 37.0 8 36.04773201657864 37.0 35.0 37.0 35.0 37.0 9 37.66284509023612 39.0 37.0 39.0 35.0 39.0 10 37.54947742598435 39.0 37.0 39.0 35.0 39.0 11 38.17931539567999 39.0 39.0 39.0 37.0 39.0 12 38.161454057903136 39.0 39.0 39.0 37.0 39.0 13 37.99301742442052 39.0 38.0 39.0 35.0 39.0 14 38.41797078878999 40.0 38.0 40.0 34.0 40.0 15 37.33366784277903 40.0 36.0 40.0 31.0 40.0 16 37.31358013701159 39.0 36.0 40.0 32.0 40.0 17 37.4379158398792 39.0 37.0 40.0 33.0 40.0 18 37.02612806126665 39.0 36.0 40.0 32.0 40.0 19 37.24769337276503 39.0 36.0 40.0 32.0 40.0 20 37.190960383184276 39.0 36.0 40.0 32.0 40.0 21 37.16614878669766 39.0 37.0 40.0 32.0 40.0 22 37.22461921305267 39.0 36.0 40.0 32.0 40.0 23 37.20785289701978 39.0 36.0 40.0 32.0 40.0 24 37.64070513533819 39.0 37.0 40.0 33.0 40.0 25 37.94346909744099 40.0 38.0 40.0 34.0 40.0 26 37.9375412967387 40.0 38.0 40.0 34.0 40.0 27 37.83463645354842 40.0 38.0 40.0 33.0 40.0 28 37.54421651245381 40.0 37.0 40.0 33.0 40.0 29 37.44356975724232 40.0 37.0 40.0 33.0 40.0 30 37.32537110467673 40.0 36.0 40.0 33.0 40.0 31 37.122751408832194 40.0 36.0 40.0 32.0 40.0 32 37.00501644792239 40.0 36.0 40.0 31.0 40.0 33 36.90708533299294 40.0 36.0 40.0 31.0 40.0 34 36.76536878195501 39.0 35.0 40.0 31.0 40.0 35 36.64361714963333 39.0 35.0 40.0 31.0 40.0 36 36.37170769757993 39.0 35.0 40.0 30.0 40.0 37 36.33882515473513 39.0 35.0 40.0 30.0 40.0 38 36.23776672182704 39.0 35.0 40.0 30.0 40.0 39 36.057095040844175 39.0 35.0 40.0 30.0 40.0 40 35.74951910536672 38.0 35.0 40.0 30.0 40.0 41 35.35263545777954 38.0 35.0 40.0 28.0 40.0 42 34.956815538292034 37.0 35.0 40.0 26.0 40.0 43 34.54451989879277 37.0 34.0 40.0 24.0 40.0 44 34.21217235788912 35.0 33.0 40.0 23.0 40.0 45 33.82020275041289 35.0 33.0 40.0 22.0 40.0 46 33.376063397683126 35.0 33.0 40.0 20.0 40.0 47 32.93162031753925 35.0 33.0 40.0 20.0 40.0 48 32.4370546251452 35.0 32.0 39.0 17.0 40.0 49 31.938114047171204 35.0 31.0 39.0 13.0 40.0 50 31.457955624589165 35.0 30.0 38.0 11.0 40.0 51 30.937692137220328 35.0 28.0 38.0 10.0 40.0 52 30.095165677676658 35.0 27.0 37.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 7.0 13 13.0 14 32.0 15 85.0 16 320.0 17 1055.0 18 2630.0 19 5650.0 20 10883.0 21 18781.0 22 29883.0 23 44634.0 24 63795.0 25 88918.0 26 121825.0 27 156485.0 28 196720.0 29 245972.0 30 304964.0 31 369217.0 32 440630.0 33 544601.0 34 714700.0 35 944832.0 36 1408869.0 37 2606790.0 38 2864391.0 39 540935.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.75064729666827 19.765108371083954 39.78908424820345 6.695160084044326 2 27.93918732537486 20.922683296126298 31.33881969753286 19.799309680965987 3 24.940471729091517 23.586207296432924 30.212146180371963 21.261174794103596 4 20.664736692974646 28.54202058541967 28.382337730729873 22.410904990875814 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 100.0 0.0 0.0 11 98.5206377320686 1.3737312963984767 0.06566549174807064 0.039965479784860036 12 98.33911754140077 1.349335896854102 0.16692217458255174 0.1446243871625797 13 95.46292466306679 3.531457914610303 0.539649089956096 0.4659683323668116 14 33.20705026194145 53.70589653263863 6.115187385404082 6.97186582001584 15 21.72123399963215 49.125709297733955 17.823913306884663 11.329143395749233 16 47.45452636984091 29.214578131404483 11.737700254808711 11.593195243945894 17 31.335451580503836 24.839760766484524 16.616703421776677 27.208084231234963 18 24.998258385055248 39.54486591952451 24.11041420932685 11.346461486093386 19 34.970067671866275 33.61617842186407 24.41472145117923 6.999032455090423 20 25.774673311833663 29.017769247488474 36.696692364120565 8.5108650765573 21 31.36885136380175 29.590519679993072 20.298942129865896 18.741686826339286 22 23.788678027709114 41.77167730778476 21.833072538752745 12.606572125753383 23 10.302780077903268 46.06388627326889 27.590804648274357 16.04252900055348 24 11.680356996529815 48.573150513646375 17.280137207708197 22.466355282115615 25 20.314955607791212 36.433049806094516 20.343904360483684 22.908090225630588 26 15.058697752937276 43.314206692047776 8.448482433052705 33.17861312196225 27 17.845068492578335 55.5465938061948 7.232967368232654 19.37537033299422 28 21.058414148956555 49.82398390943909 9.097548428619923 20.020053512984433 29 24.831165672901605 41.79330999867748 8.409582813087155 24.96594151533376 30 29.223326708801384 43.32340719400806 9.961278591796239 17.491987505394317 31 19.657951088289774 49.304347403450365 12.127549142319657 18.910152365940203 32 20.834737070715363 58.413628816961264 12.066411423084016 8.68522268923936 33 24.139559080226075 56.21243217187868 11.806324573415187 7.841684174480059 34 19.823159360282876 59.06751249891175 12.613981983217226 8.495346157588141 35 21.201102934687267 53.851765844070165 16.089068703703845 8.858062517538723 36 15.878966416121393 57.13517686153057 17.92046315275707 9.065393569590968 37 16.55953070106887 59.76582121813111 13.808435658007706 9.866212422792312 38 15.662537184651516 59.99255944577337 13.759951826546917 10.584951543028206 39 15.391280124076316 61.860952020874485 12.336065430490976 10.411702424558229 40 14.51516893323889 65.06485842269288 11.386853309805971 9.033119334262253 41 14.670170531602276 66.13270500470641 11.001361657236366 8.19576280645495 42 16.080030212436096 63.38155027349537 11.791999417443657 8.746420096624883 43 17.354679180031482 60.71235589895001 12.86410943873442 9.06885548228409 44 18.213284689196556 61.53123468092975 11.00125933469371 9.254221295179986 45 18.48749204975161 60.51471138093566 11.282970348376708 9.714826220936027 46 19.66704074082885 58.86734402484528 11.779976518681837 9.685638715644034 47 22.31010023260472 56.49939574275123 11.553988656352383 9.63651536829166 48 21.48423793708886 56.72971525938637 11.526881709427684 10.259165094097089 49 19.558050179145457 57.800154012480455 12.041112174412866 10.600683633961228 50 17.75339602123909 58.862458123433555 12.580906221304389 10.803239634022962 51 17.504922780161465 57.46372601911334 13.265520773565246 11.76583042715995 52 18.228752446894386 56.52553062552072 12.735583798282704 12.510133129302185 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 177.0 1 947.0 2 1717.0 3 4975.0 4 8233.0 5 19380.5 6 30528.0 7 38481.5 8 46435.0 9 75437.5 10 104440.0 11 108000.0 12 111560.0 13 85984.0 14 58986.5 15 57565.0 16 72037.0 17 86509.0 18 139513.0 19 192517.0 20 328166.0 21 463815.0 22 606494.0 23 749173.0 24 776241.0 25 803309.0 26 743948.5 27 684588.0 28 649145.5 29 613703.0 30 614954.0 31 616205.0 32 620692.0 33 625179.0 34 622600.5 35 620022.0 36 633603.0 37 647184.0 38 696487.0 39 786245.5 40 826701.0 41 823960.5 42 821220.0 43 788225.5 44 755231.0 45 711329.5 46 667428.0 47 605594.0 48 543760.0 49 460784.0 50 377808.0 51 293493.0 52 209178.0 53 156316.5 54 103455.0 55 80236.0 56 57017.0 57 45561.0 58 34105.0 59 29223.0 60 24341.0 61 20168.0 62 15995.0 63 11711.5 64 6152.5 65 4877.0 66 4904.0 67 4931.0 68 3798.0 69 2665.0 70 2186.5 71 1708.0 72 1126.5 73 545.0 74 312.0 75 79.0 76 69.0 77 59.0 78 33.0 79 7.0 80 9.5 81 12.0 82 9.0 83 6.0 84 7.0 85 8.0 86 4.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.1727621E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.512414631223436 #Duplication Level Percentage of deduplicated Percentage of total 1 71.85686741820103 26.23667737274206 2 10.301200920014745 7.5224343838223735 3 4.726996850108703 5.177822068549683 4 2.84301207605476 4.15220942889947 5 1.977105871836407 3.6094454681158696 6 1.3713109826724035 3.004192511261116 7 1.069385646514021 2.733209648833922 8 0.8247496372897283 2.4090880578938956 9 0.6395429703141841 2.101613229593614 >10 4.103394669578213 26.338279008584504 >50 0.16928594486196602 4.223093910480879 >100 0.10567302994760601 7.487187480436846 >500 0.00735884343361807 1.8252382638875995 >1k 0.0038813262691640604 2.2764319037860417 >5k 1.4028774181355726E-4 0.3519152504657392 >10k+ 9.352516120903817E-5 0.5511620126466108 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGCAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 26233 0.22368560511974253 No Hit CCAAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 14289 0.12184056766500212 No Hit AAAAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12136 0.10348219813720105 No Hit GGGAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11903 0.10149543543400662 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.121414223737278 0.0 0.0 0.0 0.0 11 0.1275962106892779 0.0 0.0 0.0 0.0 12 0.18757427444150865 0.0 0.0 0.0 0.0 13 0.313251937456028 0.0 0.0 0.0 0.0 14 0.6884175400961542 0.0 0.0 0.0 0.0 15 1.1733837578823532 0.0 0.0 0.0 0.0 16 1.4208593541691021 0.0 0.0 0.0 0.0 17 1.6162698300021803 0.0 0.0 0.0 0.0 18 1.9161089874920072 0.0 0.0 0.0 0.0 19 2.1031887029773557 0.0 0.0 0.0 0.0 20 2.255768667831268 0.0 0.0 0.0 0.0 21 2.412270996820242 0.0 0.0 0.0 0.0 22 2.550261472467434 0.0 0.0 0.0 0.0 23 2.6994818471708797 0.0 0.0 0.0 0.0 24 2.8831763918700988 0.0 0.0 0.0 3.4107514217930474E-5 25 3.043481708694372 0.0 0.0 0.0 3.4107514217930474E-5 26 3.22900100540425 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 27 3.600022545066898 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 28 3.966328720888917 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 29 4.288116063777982 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 30 4.653671874287206 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 31 5.096412989471607 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 32 5.570430695193851 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 33 5.933556345315047 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 34 6.241777424423931 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 35 6.525108545032279 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 36 6.851363972283893 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 37 7.208350269845862 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 38 7.598403802442115 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 39 8.028797997479625 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 40 8.517592783736786 0.0 0.0 1.7053757108965237E-5 3.4107514217930474E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCAAAT 23315 0.0 42.15269 1 ACGACGT 45 1.5905243E-8 40.88889 16 GCAAATA 39470 0.0 40.341778 2 CGTTAAG 40 2.913639E-7 40.25 20 CCAAATA 23655 0.0 39.884167 2 ACCTAAT 2535 0.0 39.648914 1 GGCCAAT 6100 0.0 39.62787 1 GCCAAAT 9955 0.0 39.623306 1 CCGTTCG 105 0.0 39.428574 32 GGCTAAT 9420 0.0 39.11465 1 AGCGAAT 3705 0.0 39.047234 1 GCCGAAT 3730 0.0 38.970512 1 GCCTAAT 3760 0.0 38.843086 1 TAAAGGA 41055 0.0 38.81793 7 TGGGAAT 10595 0.0 38.814537 1 CCTAATA 10000 0.0 38.778 2 TAAAAGG 12515 0.0 38.777466 7 CCGACGC 95 0.0 38.73684 40 CAAATAA 107970 0.0 38.72742 3 TGCGAAT 7580 0.0 38.62665 1 >>END_MODULE