##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527956_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11664285 Sequences flagged as poor quality 0 Sequence length 52 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.646234038348684 31.0 28.0 34.0 10.0 34.0 2 30.816247545391768 31.0 30.0 34.0 26.0 34.0 3 31.636382941603365 31.0 31.0 34.0 28.0 34.0 4 35.447504669167465 37.0 35.0 37.0 33.0 37.0 5 35.55264501853307 37.0 35.0 37.0 33.0 37.0 6 35.95748354914168 37.0 35.0 37.0 35.0 37.0 7 36.16720184734855 37.0 35.0 37.0 35.0 37.0 8 35.994841947020326 37.0 35.0 37.0 35.0 37.0 9 37.65196237917712 39.0 37.0 39.0 35.0 39.0 10 37.542391839705566 39.0 37.0 39.0 35.0 39.0 11 38.16691550317915 39.0 39.0 39.0 37.0 39.0 12 38.145985801958716 39.0 39.0 39.0 37.0 39.0 13 38.00474199661617 39.0 38.0 39.0 35.0 39.0 14 38.45170938467296 40.0 38.0 40.0 35.0 40.0 15 37.36675509900521 40.0 36.0 40.0 32.0 40.0 16 37.36190482314175 39.0 36.0 40.0 32.0 40.0 17 37.49860535815097 39.0 37.0 40.0 33.0 40.0 18 37.11962362030763 39.0 36.0 40.0 32.0 40.0 19 37.328640203835896 39.0 37.0 40.0 32.0 40.0 20 37.24549160107113 39.0 37.0 40.0 32.0 40.0 21 37.42069188124261 39.0 37.0 40.0 32.0 40.0 22 37.36740700351543 39.0 37.0 40.0 32.0 40.0 23 37.31993019717883 39.0 37.0 40.0 32.0 40.0 24 37.74190325425005 40.0 37.0 40.0 33.0 40.0 25 37.898408775162814 40.0 38.0 40.0 33.0 40.0 26 37.871597273214775 40.0 38.0 40.0 33.0 40.0 27 37.813923185175945 40.0 38.0 40.0 33.0 40.0 28 37.35640804387067 40.0 37.0 40.0 33.0 40.0 29 37.367992380158746 40.0 37.0 40.0 33.0 40.0 30 37.316764293739396 40.0 36.0 40.0 33.0 40.0 31 37.162021246908836 40.0 36.0 40.0 32.0 40.0 32 37.04492337078526 40.0 36.0 40.0 31.0 40.0 33 36.93678883875008 40.0 36.0 40.0 31.0 40.0 34 36.82908699504513 39.0 35.0 40.0 31.0 40.0 35 36.64950213407852 39.0 35.0 40.0 31.0 40.0 36 35.98250882930244 39.0 35.0 40.0 30.0 40.0 37 36.20291479503459 39.0 35.0 40.0 30.0 40.0 38 36.210527949205634 39.0 35.0 40.0 30.0 40.0 39 36.06920295586056 39.0 35.0 40.0 30.0 40.0 40 35.77793555284357 38.0 35.0 40.0 30.0 40.0 41 35.41615023981324 38.0 35.0 40.0 28.0 40.0 42 34.85917250821632 37.0 35.0 40.0 26.0 40.0 43 34.487711762872735 37.0 34.0 40.0 24.0 40.0 44 34.17645342170566 36.0 33.0 40.0 23.0 40.0 45 33.51970489404194 35.0 33.0 40.0 20.0 40.0 46 33.253380897328896 35.0 33.0 40.0 20.0 40.0 47 32.89086660691161 35.0 33.0 40.0 19.0 40.0 48 32.39691219821875 35.0 32.0 39.0 15.0 40.0 49 31.924772842913217 35.0 31.0 39.0 13.0 40.0 50 31.383811266614284 35.0 30.0 38.0 10.0 40.0 51 30.96015392285082 35.0 28.0 38.0 10.0 40.0 52 30.206452002844582 35.0 27.0 37.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 3.0 11 7.0 12 14.0 13 25.0 14 53.0 15 131.0 16 353.0 17 957.0 18 2486.0 19 5348.0 20 10446.0 21 17871.0 22 28924.0 23 43481.0 24 62754.0 25 88508.0 26 121736.0 27 156341.0 28 196198.0 29 246581.0 30 305418.0 31 369690.0 32 442391.0 33 549043.0 34 719137.0 35 955660.0 36 1428433.0 37 2600222.0 38 2769930.0 39 542141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.715388470017665 19.785619092811945 39.5826919524 6.916300484770391 2 28.03654060236011 20.97120397864078 31.200163576250066 19.79209184274904 3 24.954525716749888 23.548884479417296 30.24655176035222 21.25003804348059 4 20.67631235004975 28.552080131786905 28.4039613229615 22.36764619520185 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 100.0 0.0 0.0 11 98.51816892334163 1.3717943277277604 0.06932272316734372 0.04071402576325939 12 98.33368269036636 1.3540649941252294 0.1682486324708287 0.1440036830375801 13 95.46081907292218 3.534918771274879 0.543025140417951 0.4612370153849979 14 33.16757092269265 53.77425191514096 6.097321867564108 6.9608552946022835 15 21.732442237136695 49.1286778400905 17.815914134471168 11.32296578830164 16 47.475477493905544 29.201969945007345 11.723633295997141 11.598919265089974 17 31.328641232617343 24.82435914417386 16.59819697478242 27.248802648426373 18 25.021190754512602 39.54551864945001 24.109493209399464 11.32379738663793 19 34.96576944064724 33.58150971105387 24.471521400583065 6.981199447715826 20 25.84875969680096 28.963224063883896 36.69863176354144 8.489384475773697 21 31.113222970803612 29.738419457343507 20.315758745606782 18.832598826246098 22 23.792782840954246 41.7520062309863 21.869458779513703 12.585752148545753 23 10.282396220599892 46.093489656674194 27.612896975682606 16.011217147043304 24 11.66102337177118 48.54318974544947 17.33758220070926 22.458204682070097 25 20.309911837716584 36.429399658873216 20.3268695852339 22.933818918176296 26 15.046743113701355 43.35573076275143 8.427923357496837 33.16960276605038 27 17.814876779845484 55.60630591587912 7.210514832242182 19.368302472033218 28 21.22509009339192 49.597725021293634 9.162833384129417 20.014351501185025 29 24.883119711152464 41.759919274949134 8.380299349681527 24.97666166421688 30 29.23226755862018 43.28391324457521 9.939340473933893 17.544478722870714 31 19.653772177205887 49.32626389015701 12.100578818161594 18.919385114475514 32 20.877147634852886 58.39497234506873 12.068506556552759 8.659373463525625 33 24.19328745825398 56.17066969814266 11.8017692468934 7.834273596709957 34 19.877017751195208 59.02822161838467 12.61373500390294 8.481025626517184 35 21.272105405517785 53.742788349221584 16.14456436892617 8.84054187633447 36 16.270752986573974 56.11267214407055 18.00467838363003 9.611896485725444 37 16.59036966260684 59.68258663089937 13.80521823669432 9.921825469799478 38 15.70569477683373 59.90046539500706 13.79173262656048 10.602107201598725 39 15.346058502514298 61.843173413543994 12.342822556204688 10.46794552773702 40 14.510722260301426 65.06918340901306 11.384932724123253 9.035161606562255 41 14.664207879008442 66.11209345450663 11.000785731830112 8.222912934654802 42 16.34358213983969 63.04986546539286 11.87897072130868 8.727581673458767 43 17.31251422611845 60.707098634849885 12.89800446405416 9.082382674977506 44 18.382146869696687 61.439873939980025 10.945437289983913 9.232541900339369 45 18.73236979377647 59.92210409810803 11.475448345097877 9.870077763017623 46 19.7278873072803 58.852394295921265 11.790838444019501 9.628879952778933 47 22.29303382076141 56.46987363563218 11.557613689994714 9.679478853611688 48 21.631956009305327 56.62528821955225 11.545071129520583 10.19768464162184 49 19.634739720437214 57.72244934001527 12.039794981003979 10.603015958543537 50 17.93217501115585 58.6528364147481 12.65628368991327 10.758704884182785 51 17.494891457127462 57.50287308652009 13.23930270908161 11.762932747270835 52 18.24067227438287 56.53879341939947 12.757352893897911 12.463181412319743 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 180.0 1 942.5 2 1705.0 3 4884.5 4 8064.0 5 18903.0 6 29742.0 7 37560.0 8 45378.0 9 74153.0 10 102928.0 11 106632.5 12 110337.0 13 85729.0 14 59002.0 15 56883.0 16 70817.0 17 84751.0 18 136297.5 19 187844.0 20 319422.0 21 451000.0 22 592222.5 23 733445.0 24 765128.5 25 796812.0 26 740561.0 27 684310.0 28 648184.0 29 612058.0 30 613222.0 31 614386.0 32 619876.5 33 625367.0 34 622637.5 35 619908.0 36 634727.0 37 649546.0 38 694621.5 39 780828.5 40 821960.0 41 820123.5 42 818287.0 43 786690.5 44 755094.0 45 710364.0 46 665634.0 47 604666.5 48 543699.0 49 460121.0 50 376543.0 51 293584.0 52 210625.0 53 157282.5 54 103940.0 55 80533.5 56 57127.0 57 45363.0 58 33599.0 59 28798.5 60 23998.0 61 19978.5 62 15959.0 63 11696.0 64 6201.0 65 4969.0 66 4935.0 67 4901.0 68 3760.5 69 2620.0 70 2162.0 71 1704.0 72 1132.5 73 561.0 74 321.5 75 82.0 76 70.5 77 59.0 78 32.0 79 5.0 80 6.5 81 8.0 82 6.0 83 4.0 84 8.0 85 12.0 86 6.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.1664285E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.86296877238598 #Duplication Level Percentage of deduplicated Percentage of total 1 71.60151324225787 26.394443467049328 2 10.398765843761405 7.666587611398613 3 4.766763697538112 5.271511839830717 4 2.940900721507909 4.336413258385338 5 1.9777051840784161 3.6452042220834264 6 1.4098293757579472 3.1182297751774573 7 1.0478736418381656 2.7039413335540674 8 0.8118228705498782 2.3940960900631127 9 0.6755376274308508 2.2412090218099654 >10 4.093232823974011 26.185608510533743 >50 0.16239784937763488 4.101766504755017 >100 0.10267069463328862 7.222941301314129 >500 0.00716613368678688 1.7765206250193732 >1k 0.0035859216704066067 2.075617977983892 >5k 1.406231624196956E-4 0.3388036946846153 >10k+ 9.374877494646373E-5 0.5271047663574749 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGCAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 25035 0.21462952937106733 No Hit CCAAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 13103 0.11233436082880346 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.12299939516224098 0.0 0.0 0.0 0.0 11 0.12954930370785694 0.0 0.0 0.0 0.0 12 0.189132895844023 0.0 0.0 0.0 0.0 13 0.3159387823599989 0.0 0.0 0.0 0.0 14 0.7007887753085594 0.0 0.0 0.0 0.0 15 1.1869737407822254 0.0 0.0 0.0 0.0 16 1.4378163770861223 0.0 0.0 0.0 0.0 17 1.6327190222118202 0.0 0.0 0.0 0.0 18 1.9384128559958882 0.0 0.0 0.0 0.0 19 2.128823155469881 0.0 0.0 0.0 0.0 20 2.280688443397945 0.0 0.0 0.0 0.0 21 2.438366346501307 0.0 0.0 0.0 0.0 22 2.574028326639824 0.0 0.0 0.0 0.0 23 2.71870929079665 0.0 0.0 0.0 0.0 24 2.8988917880521607 0.0 0.0 0.0 8.573178724628214E-6 25 3.061396390777489 0.0 0.0 0.0 8.573178724628214E-6 26 3.2443737442972287 0.0 0.0 0.0 8.573178724628214E-6 27 3.6161324933332817 0.0 0.0 0.0 8.573178724628214E-6 28 3.9702647869114993 0.0 0.0 0.0 8.573178724628214E-6 29 4.2884840348122495 0.0 0.0 0.0 8.573178724628214E-6 30 4.649654908123387 0.0 0.0 0.0 8.573178724628214E-6 31 5.086638400896412 0.0 0.0 0.0 8.573178724628214E-6 32 5.55397094635462 0.0 0.0 0.0 8.573178724628214E-6 33 5.913710098818744 0.0 0.0 0.0 8.573178724628214E-6 34 6.208198788009724 0.0 0.0 0.0 8.573178724628214E-6 35 6.491405173999092 0.0 0.0 0.0 8.573178724628214E-6 36 6.807018175567555 0.0 0.0 0.0 8.573178724628214E-6 37 7.154900621855519 0.0 0.0 0.0 8.573178724628214E-6 38 7.528956982789772 0.0 0.0 0.0 8.573178724628214E-6 39 7.959570603770398 0.0 0.0 0.0 8.573178724628214E-6 40 8.441494699417923 0.0 0.0 0.0 8.573178724628214E-6 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTACT 45 3.110472E-10 46.0 25 TGCGACA 70 0.0 42.714283 34 GGCAAAT 22100 0.0 41.618553 1 CGCCCGA 125 0.0 40.479996 37 ACTCGTG 40 2.913639E-7 40.25 34 GCAAATA 37695 0.0 40.050934 2 CCAAATA 23035 0.0 39.629692 2 GCCAAAT 9850 0.0 39.228424 1 GGCTAAT 9285 0.0 38.915455 1 ATGCAAT 6525 0.0 38.879696 1 TTGCAAT 12755 0.0 38.84124 1 TGGGAAT 10420 0.0 38.71593 1 CCGAATA 10960 0.0 38.65511 2 GGCCAAT 5880 0.0 38.607143 1 TAAAGGA 40860 0.0 38.535976 7 GGCGAAT 6730 0.0 38.515602 1 CCCAATA 4855 0.0 38.51493 2 GTCAAAT 9320 0.0 38.497852 1 CAAATAA 105310 0.0 38.491314 3 TGGCAAT 12865 0.0 38.437622 1 >>END_MODULE