##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527955_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12430706 Sequences flagged as poor quality 0 Sequence length 59 %GC 34 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.664439815405498 31.0 30.0 33.0 16.0 34.0 2 30.870788191756766 31.0 30.0 34.0 27.0 34.0 3 31.501655336390385 31.0 31.0 34.0 28.0 34.0 4 35.33100871342303 35.0 35.0 37.0 33.0 37.0 5 35.19583095280348 37.0 35.0 37.0 33.0 37.0 6 35.69249791604757 37.0 35.0 37.0 33.0 37.0 7 35.92532934171237 37.0 35.0 37.0 35.0 37.0 8 35.79373110425104 37.0 35.0 37.0 35.0 37.0 9 37.40782277370248 39.0 37.0 39.0 34.0 39.0 10 37.264023781111064 39.0 37.0 39.0 33.0 39.0 11 37.96730330521854 39.0 37.0 39.0 35.0 39.0 12 37.9731093310388 39.0 38.0 39.0 35.0 39.0 13 37.77107905214716 39.0 37.0 39.0 35.0 39.0 14 37.938973216806836 40.0 38.0 40.0 33.0 40.0 15 36.90971470164285 39.0 36.0 40.0 31.0 40.0 16 36.927135031590325 39.0 36.0 40.0 31.0 40.0 17 36.95937318443538 39.0 36.0 40.0 32.0 40.0 18 36.43078245113351 38.0 35.0 40.0 31.0 40.0 19 36.65560379273711 39.0 36.0 40.0 31.0 40.0 20 36.684920631217565 39.0 36.0 40.0 31.0 40.0 21 36.81141682539994 39.0 36.0 40.0 31.0 40.0 22 36.77781720523355 39.0 36.0 40.0 31.0 40.0 23 36.76829892043139 39.0 36.0 40.0 31.0 40.0 24 37.17952174236926 39.0 36.0 40.0 32.0 40.0 25 37.327749284714805 39.0 37.0 40.0 32.0 40.0 26 37.210642340024776 40.0 37.0 40.0 32.0 40.0 27 37.03056230273646 39.0 36.0 40.0 31.0 40.0 28 36.761473563931126 39.0 36.0 40.0 31.0 40.0 29 36.62450137586715 39.0 35.0 40.0 30.0 40.0 30 36.50266002590681 39.0 35.0 40.0 30.0 40.0 31 36.37345996277283 39.0 35.0 40.0 30.0 40.0 32 36.167507300068074 38.0 35.0 40.0 30.0 40.0 33 35.98275817962391 38.0 35.0 40.0 30.0 40.0 34 35.85950411826971 38.0 35.0 40.0 29.0 40.0 35 35.72421180261202 38.0 35.0 40.0 29.0 40.0 36 35.32116743811655 38.0 34.0 40.0 27.0 40.0 37 35.35705172336954 38.0 35.0 40.0 27.0 40.0 38 35.27486934370421 38.0 35.0 40.0 27.0 40.0 39 35.09877411628913 38.0 34.0 40.0 26.0 40.0 40 34.75274734998961 37.0 33.0 40.0 25.0 40.0 41 34.36099775829305 37.0 33.0 40.0 24.0 40.0 42 34.027559496620704 36.0 33.0 40.0 23.0 40.0 43 33.54088174879207 35.0 33.0 40.0 22.0 40.0 44 33.2252464984692 35.0 33.0 39.0 21.0 40.0 45 32.794312969834536 35.0 32.0 39.0 20.0 40.0 46 32.2867369721398 35.0 31.0 39.0 17.0 40.0 47 31.863647487117788 35.0 31.0 38.0 15.0 40.0 48 31.32439090748345 35.0 29.0 38.0 13.0 40.0 49 30.903241537528118 35.0 28.0 38.0 11.0 40.0 50 30.38110023678462 35.0 27.0 37.0 10.0 40.0 51 29.879419077243078 34.0 26.0 37.0 9.0 40.0 52 29.349440249009188 34.0 23.0 37.0 9.0 40.0 53 28.70861260816562 33.0 22.0 36.0 8.0 40.0 54 27.962552649865582 33.0 20.0 36.0 8.0 39.0 55 27.227530761326026 33.0 18.0 35.0 8.0 39.0 56 26.403358023269153 33.0 15.0 35.0 8.0 39.0 57 25.617508530891165 31.0 10.0 35.0 8.0 39.0 58 24.849236640300237 31.0 10.0 35.0 8.0 38.0 59 24.02267200270041 29.0 9.0 35.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 8.0 13 33.0 14 98.0 15 439.0 16 1351.0 17 4238.0 18 10456.0 19 20689.0 20 36817.0 21 58668.0 22 86792.0 23 122928.0 24 165586.0 25 210942.0 26 260913.0 27 319873.0 28 376713.0 29 434290.0 30 508478.0 31 613146.0 32 748413.0 33 909056.0 34 1083859.0 35 1225016.0 36 1465472.0 37 1936847.0 38 1678836.0 39 150745.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.93680133694739 20.21655085399011 39.006014622178334 6.840633186884156 2 27.62674943804479 21.305797112408577 31.122287020544125 19.945166429002505 3 24.893147661926847 23.76120069125599 30.058405371344154 21.28724627547301 4 20.705388736568946 28.661026976263454 28.180981836429886 22.452602450737714 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 100.0 0.0 0.0 11 98.51053512165761 1.3830831490986917 0.06332705479479604 0.04305467444890097 12 98.36359254253138 1.3205525092460557 0.1544240528253182 0.16143089539725258 13 95.49472089517683 3.50919730544669 0.515055218907116 0.4810265804693635 14 32.802988020149456 54.11185816799142 6.055416321486487 7.0297374903726295 15 21.740470734325147 49.46509071970651 17.499730103825158 11.29470844214319 16 47.45839053711028 29.155077756645518 11.702931434465588 11.68360027177861 17 31.137780911237062 24.863728576639172 16.455694471416184 27.542796040707586 18 25.114679729373375 39.78034715003315 23.742867058395557 11.362106062197915 19 35.04065658056751 33.395737941191754 24.610822587228753 6.952782891011982 20 25.817391224601405 28.94427717942971 36.81804557198923 8.420286023979653 21 31.29991973102734 29.610779950873265 20.434237604847223 18.655062713252168 22 23.80664461053137 41.52250081371082 22.031998826132643 12.638855749625161 23 10.087898466909282 46.011119561511634 27.940102517105625 15.960879454473462 24 11.33561520962687 48.886394706784955 17.51673637844866 22.261253705139513 25 19.920445387414038 36.431671700706296 20.60984307729585 23.038039834583813 26 14.89291115082281 43.463082466917 8.436962470192762 33.20704391206743 27 17.64101733240252 55.79400719476432 7.16176538967296 19.4032100831602 28 20.778095789571406 50.1590336059754 8.969627308376532 20.09324329607667 29 24.76883452959148 41.8628676440421 8.245460877282433 25.122836949083986 30 29.105088640983062 43.579431449830764 9.736896681491784 17.578583227694388 31 19.452113178446982 49.81569027535524 11.77328142102307 18.95891512517471 32 20.63946327746791 59.0990970263475 11.784294472091931 8.477145224092663 33 23.997430234453297 56.91304258985773 11.5457883084034 7.543738867285575 34 19.617759441820922 59.81370647813568 12.410614489635584 8.157919590407818 35 21.049423902391386 54.45234566725333 15.97889934811426 8.519331082241024 36 15.626900032870218 57.69444631704748 17.885299515570555 8.793354134511748 37 16.31978103254956 60.46551981842383 13.574056051200953 9.64064309782566 38 15.432542608601635 60.737950040810226 13.459726261726408 10.369781088861727 39 15.126349219424867 62.715013934043654 12.017298132543718 10.141338713987766 40 14.20090701203938 66.06121969259027 11.024989248398281 8.712884046972071 41 14.275303430070666 67.28906628473072 10.554501087870632 7.881129197327971 42 15.608035456715008 64.62142214609531 11.385419299595695 8.385123097593974 43 16.89648198581802 61.882518981625026 12.491301781250396 8.729697251306563 44 17.781854063638864 62.74642003438904 10.494126399578592 8.97759950239351 45 18.055844937528086 61.723734758106254 10.772694648236392 9.447725656129267 46 19.280280621229398 59.974791455931786 11.301329144137107 9.443598778701709 47 21.98990145853341 57.45994636185587 11.092057040042617 9.458095139568098 48 21.16292509854227 57.64041076991122 11.140083274433488 10.056580857113023 49 19.243935139323543 58.71685003249212 11.637054242936804 10.40216058524753 50 17.3314773915496 59.82573314822183 12.200867754413949 10.641921705814617 51 17.138085318726066 58.319543556094075 12.903064395537953 11.639306729641904 52 17.69868903664844 57.242484859669275 12.476041183823348 12.582784919858936 53 17.038943725320188 56.950634984046765 13.152720368416727 12.857700922216326 54 17.048991424944006 56.62600338226969 13.441030622074079 12.883974570712233 55 18.194662475325217 54.5412062677695 13.880820606649372 13.383310650255906 56 19.065176185487775 52.94517463448979 14.051366028606903 13.938283151415535 57 19.625393762832136 51.0655388358473 13.964508532339192 15.344558868981375 58 20.29024739222374 50.06330292100867 14.162912388081578 15.483537298686013 59 20.792849577489804 49.11299486931796 14.415005873359082 15.679149679833149 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 152.0 1 739.0 2 1326.0 3 3790.0 4 14298.5 5 22343.0 6 27887.5 7 33432.0 8 54681.0 9 78108.0 10 80286.0 11 62747.0 12 45208.0 13 42447.0 14 41537.0 15 43388.0 16 55553.0 17 67718.0 18 116298.0 19 267358.5 20 369839.0 21 473978.0 22 578117.0 23 641658.5 24 705200.0 25 745069.5 26 797014.0 27 809089.0 28 790715.0 29 772341.0 30 719444.5 31 603817.0 32 541086.0 33 509588.5 34 478091.0 35 491175.0 36 549784.0 37 595309.0 38 655860.5 39 716412.0 40 758293.5 41 800175.0 42 790954.5 43 736129.0 44 690524.0 45 638057.5 46 585591.0 47 536403.5 48 430955.5 49 374695.0 50 307416.5 51 240138.0 52 188931.5 53 106954.0 54 76183.0 55 61096.5 56 46010.0 57 42032.0 58 31387.5 59 24721.0 60 20568.0 61 16415.0 62 13164.0 63 9913.0 64 8394.5 65 5900.5 66 4925.0 67 3785.5 68 2646.0 69 2108.0 70 1393.5 71 1217.0 72 1613.5 73 2010.0 74 1195.5 75 244.0 76 107.0 77 62.0 78 17.0 79 15.0 80 13.0 81 10.0 82 9.5 83 12.0 84 6.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1.2430706E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.907433762289934 #Duplication Level Percentage of deduplicated Percentage of total 1 81.35855369305771 43.0447229051116 2 7.716193338442134 8.164879759013003 3 3.216490493982946 5.105287732723139 4 1.8622228058922465 3.9410171901347892 5 1.1954660525730312 3.1624520495786936 6 0.8390984566912569 2.6636727610459427 7 0.6014317738335496 2.2274148215644543 8 0.4726324784060441 2.000461723613977 9 0.3703970068816957 1.7637079596609386 >10 2.2549285693111525 20.653226448374646 >50 0.0757578236393564 2.717933382532715 >100 0.03524920402803815 3.325981666117883 >500 0.001089816400715588 0.3838018067178278 >1k 3.968983964491115E-4 0.38694673579550853 >5k 6.105897572562749E-5 0.22857216761970003 >10k+ 3.0529487862813744E-5 0.22992089039521024 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGCAAATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 17577 0.14139985291261814 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.10843310106441259 0.0 0.0 0.0 0.0 11 0.11398387187340767 0.0 0.0 0.0 0.0 12 0.16800332981891777 0.0 0.0 0.0 0.0 13 0.28098162727040604 0.0 0.0 0.0 0.0 14 0.62307000101201 0.0 0.0 0.0 0.0 15 1.0543166252986758 0.0 0.0 0.0 0.0 16 1.2765646617336135 0.0 0.0 0.0 0.0 17 1.45336877889317 0.0 0.0 0.0 0.0 18 1.7277538379557846 0.0 0.0 0.0 0.0 19 1.8979050747399222 0.0 0.0 0.0 0.0 20 2.034791909646966 0.0 0.0 0.0 0.0 21 2.1785005614323114 0.0 0.0 0.0 0.0 22 2.3010358381897213 0.0 0.0 0.0 0.0 23 2.432323634715518 0.0 0.0 0.0 0.0 24 2.5959989722224948 0.0 0.0 0.0 4.0222976876775945E-5 25 2.7402144335164875 0.0 0.0 0.0 4.0222976876775945E-5 26 2.9102047783931178 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 27 3.240202125285563 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 28 3.57204972911434 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 29 3.8614942707196196 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 30 4.193695836744912 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 31 4.602852002130852 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 32 5.043068350261039 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 33 5.380523037066439 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 34 5.655286192111695 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 35 5.913944067215491 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 36 6.211457337982251 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 37 6.535879780279576 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 38 6.8908234174309975 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 39 7.286609465303097 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 40 7.734870408808639 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 41 8.20271994205317 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 42 8.578257743365501 0.0 0.0 8.044595375355189E-6 4.0222976876775945E-5 43 8.9168225843327 0.0 0.0 8.044595375355189E-6 8.044595375355189E-5 44 9.24488922833506 0.0 0.0 8.044595375355189E-6 8.044595375355189E-5 45 9.575699079360415 0.0 0.0 8.044595375355189E-6 8.044595375355189E-5 46 9.908664881946367 0.0 0.0 8.044595375355189E-6 8.849054912890707E-5 47 10.234479039243627 0.0 0.0 8.044595375355189E-6 8.849054912890707E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCAAAT 24750 0.0 47.59293 1 CCTAACT 310 0.0 46.16129 46 GCAAATA 42270 0.0 45.696354 2 CCAAATA 24915 0.0 45.01224 2 GCCAAAT 10715 0.0 44.789078 1 GGCCAAT 6985 0.0 44.425915 1 ACCTAAT 2805 0.0 44.40285 1 TAGCAAT 8505 0.0 44.182243 1 CGGGTTA 30 4.3472595E-5 44.166668 44 CCGCGAC 120 0.0 44.166668 15 TAAAGGA 44240 0.0 44.06883 7 ACCGAAT 2765 0.0 43.990955 1 TTGCAAT 13675 0.0 43.930893 1 GTCAAAT 10035 0.0 43.915794 1 TACGAAT 5435 0.0 43.882244 1 CCGAATA 11485 0.0 43.77057 2 GCGAATA 19440 0.0 43.744083 2 CAAATAA 115965 0.0 43.733627 3 TGGCAAT 13665 0.0 43.672157 1 TTGGAAT 14675 0.0 43.66405 1 >>END_MODULE