##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527953_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14223025 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.362462767238334 31.0 31.0 33.0 30.0 34.0 2 31.97356736699823 33.0 31.0 34.0 30.0 34.0 3 32.299710364004845 34.0 31.0 34.0 30.0 34.0 4 35.967051523849534 37.0 35.0 37.0 35.0 37.0 5 36.09144911156382 37.0 35.0 37.0 35.0 37.0 6 36.07603888764872 37.0 35.0 37.0 35.0 37.0 7 34.40121472049722 35.0 35.0 35.0 32.0 37.0 8 35.32968366434004 35.0 35.0 37.0 33.0 37.0 9 37.95874218037302 39.0 38.0 39.0 35.0 39.0 10 38.1347705568963 39.0 39.0 39.0 35.0 39.0 11 37.69069125590372 39.0 37.0 39.0 35.0 39.0 12 38.00727271448936 39.0 38.0 39.0 35.0 39.0 13 38.13127116067081 39.0 39.0 39.0 37.0 39.0 14 38.843040492440956 40.0 39.0 40.0 36.0 40.0 15 38.24056324164515 40.0 38.0 40.0 34.0 40.0 16 37.38408467959523 39.0 36.0 40.0 33.0 40.0 17 37.37572647168939 40.0 36.0 40.0 33.0 40.0 18 37.42062092979517 40.0 36.0 40.0 33.0 40.0 19 37.52742654955609 40.0 36.0 40.0 33.0 40.0 20 37.52418251391669 40.0 36.0 40.0 33.0 40.0 21 37.453115494066836 40.0 36.0 40.0 33.0 40.0 22 37.40291541356357 40.0 36.0 40.0 33.0 40.0 23 37.33258206323901 40.0 36.0 40.0 32.0 40.0 24 37.28307754503701 40.0 36.0 40.0 32.0 40.0 25 37.24400203191656 40.0 36.0 40.0 32.0 40.0 26 37.313654936274105 40.0 36.0 40.0 33.0 40.0 27 37.353309158916616 40.0 36.0 40.0 33.0 40.0 28 37.214779767313914 40.0 35.0 40.0 33.0 40.0 29 37.325551210097714 40.0 35.0 40.0 33.0 40.0 30 37.354782333575315 40.0 35.0 40.0 33.0 40.0 31 37.35603157556146 40.0 35.0 40.0 33.0 40.0 32 37.270925207542 40.0 35.0 40.0 33.0 40.0 33 37.18312904603627 40.0 35.0 40.0 33.0 40.0 34 37.10244431124884 40.0 35.0 40.0 33.0 40.0 35 36.92528516261484 39.0 35.0 40.0 32.0 40.0 36 36.46313129590927 39.0 35.0 40.0 31.0 40.0 37 36.51355172334999 39.0 35.0 40.0 31.0 40.0 38 36.370893182005936 39.0 35.0 40.0 31.0 40.0 39 36.31550482404411 38.0 35.0 40.0 31.0 40.0 40 36.20887659270795 38.0 35.0 40.0 31.0 40.0 41 36.10118550730242 38.0 35.0 40.0 31.0 40.0 42 35.79997257967275 37.0 35.0 40.0 30.0 40.0 43 35.59183886690771 37.0 35.0 40.0 30.0 40.0 44 35.4121637274771 37.0 35.0 40.0 30.0 40.0 45 35.01269666614521 36.0 34.0 40.0 28.0 40.0 46 35.00981950042273 36.0 34.0 40.0 29.0 40.0 47 34.91654039840329 35.0 34.0 39.0 29.0 40.0 48 34.7370038370881 35.0 34.0 39.0 29.0 40.0 49 34.574669171994 35.0 34.0 39.0 28.0 40.0 50 34.346448382112804 35.0 34.0 39.0 28.0 40.0 51 34.27018710857922 35.0 34.0 39.0 28.0 40.0 52 33.76147781502177 35.0 33.0 37.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 6.0 13 8.0 14 22.0 15 58.0 16 203.0 17 548.0 18 1455.0 19 3326.0 20 6402.0 21 11794.0 22 19564.0 23 30278.0 24 45180.0 25 65605.0 26 90985.0 27 121945.0 28 161767.0 29 211467.0 30 271587.0 31 341730.0 32 426500.0 33 554216.0 34 860451.0 35 1565178.0 36 1413974.0 37 2663042.0 38 4171352.0 39 1184381.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.87972846845168 19.252121120507066 33.53934201760877 18.32880839343248 2 29.100047282487374 19.642600642268434 33.77927691190868 17.478075163335507 3 22.595256634928223 21.832598902132283 35.04220796912049 20.529936493819 4 22.068568395260503 25.053587404929683 40.16814988372727 12.709694316082548 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.57385296025282 0.3081412006236367 0.10681272092258855 0.011193118200945299 12 99.74393632859395 0.19252585156814392 0.04619973599146455 0.017338083846439138 13 99.24977984641102 0.38938973952446826 0.1069533379854145 0.25387707607910415 14 67.40313681512899 20.4215207383802 4.474631803009556 7.700710643481257 15 38.293942392704786 23.848063263616563 16.073781772864773 21.784212570813875 16 31.15596014209354 16.608696110707815 26.081230961767975 26.154112785430666 17 25.358065531066703 15.216791083472044 28.51233123755319 30.91281214790806 18 24.083744491765994 16.220121950147735 31.16256211319322 28.533571444893052 19 27.386529940009247 15.26342673235827 28.507072159403503 28.84297116822898 20 32.505019150286245 15.486016511958603 24.33248904505195 27.676475292703206 21 33.27989650584176 17.565974889308006 21.47283717774524 27.68129142710499 22 32.8658214409382 18.214346104292158 21.470095145020135 27.449737309749505 23 32.2034307047903 19.53455752204612 20.503191128469506 27.758820644694076 24 31.532356865012893 21.60050340908492 20.203958018775893 26.6631817071263 25 33.02426171647733 19.397807428447887 21.979269529512884 25.598661325561896 26 31.75103045941352 18.55414723661106 22.119619419919463 27.57520288405596 27 32.77017371480399 19.618302013812112 20.74171985214116 26.869804419242744 28 34.06157972723805 17.589886820841556 20.13998428604323 28.208549165877162 29 31.50557634539769 17.34572638380373 20.098228049237065 31.050469221561517 30 29.75937256666567 16.871551586248355 21.925546780660234 31.44352906642574 31 29.097952088251265 17.136530379437566 21.180100576354185 32.58541695595698 32 31.186459983020487 20.60731103263898 19.756950437758494 28.44927854658204 33 32.19147825445009 20.356436130851208 19.409844249025788 28.042241365672915 34 31.99055756423124 19.429158002604932 21.067642080359136 27.512642352804694 35 35.0271760051044 19.443050968412134 19.47484448631708 26.054928540166383 36 37.623536483975805 18.672167137440876 18.95368952807156 24.75060685051176 37 36.657194935676486 18.679528440679814 20.776149939974093 23.887126683669614 38 31.914090005466488 21.647631217691032 23.911636237720177 22.526642539122303 39 32.446276372290704 23.47382501261159 22.280731419652287 21.799167195445413 40 31.681945296447132 24.889360737255263 19.032041355478178 24.396652610819427 41 33.527980158932436 23.678387684757638 18.05030223879941 24.743329917510515 42 35.268067095431526 22.92074295025144 17.640944876353657 24.170245077963372 43 34.145099231703526 21.742702413867654 17.900727869071453 26.211470485357367 44 32.10371914554042 21.777603568861053 18.401500384060355 27.717176901538178 45 29.163430423556168 21.66171401653305 19.88839926808819 29.28645629182259 46 28.50525819929305 19.4942566718402 21.35175182494582 30.648733303920935 47 29.249797423543868 17.159725163950707 23.230402815153596 30.360074597351826 48 30.411202961395347 17.097347434881115 22.247974674866985 30.243474928856557 49 31.656317836747107 18.64092905693409 21.62307244766848 28.079680658650325 50 30.065207647458962 21.23408346677307 21.052054678944877 27.648654206823092 51 29.500468430590537 20.605335362906274 21.93740079905646 27.956795407446727 52 30.052207600000703 19.549273097670856 23.845293107478895 26.55322619484955 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 3.0 6 4.0 7 9.0 8 14.0 9 307.5 10 601.0 11 1089.5 12 1578.0 13 2280.0 14 3461.5 15 3941.0 16 4607.0 17 5273.0 18 6663.5 19 8054.0 20 10175.5 21 12297.0 22 15669.0 23 19041.0 24 24816.5 25 30592.0 26 35972.0 27 41352.0 28 44390.5 29 47429.0 30 49726.5 31 52024.0 32 55492.0 33 58960.0 34 62619.5 35 66279.0 36 76810.0 37 87341.0 38 92933.5 39 110073.5 40 121621.0 41 150843.5 42 180066.0 43 213103.5 44 246141.0 45 296679.5 46 347218.0 47 405203.5 48 463189.0 49 538392.5 50 613596.0 51 709486.0 52 805376.0 53 944073.5 54 1082771.0 55 1214118.5 56 1345466.0 57 1475841.5 58 1606217.0 59 1650635.5 60 1695054.0 61 1582453.0 62 1469852.0 63 1293934.5 64 970771.5 65 823526.0 66 722688.5 67 621851.0 68 534785.0 69 447719.0 70 393637.5 71 339556.0 72 266977.0 73 194398.0 74 149218.5 75 104039.0 76 72299.5 77 40560.0 78 27983.5 79 15407.0 80 9449.5 81 3492.0 82 2152.5 83 813.0 84 734.5 85 656.0 86 383.0 87 110.0 88 65.5 89 12.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.4223025E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 6.223889720787961 #Duplication Level Percentage of deduplicated Percentage of total 1 69.71321455751313 4.338873594875916 2 9.60747256149939 1.1959169943653687 3 4.676049203007687 0.8730964370549484 4 2.813851447108252 0.700524043899255 5 1.7727652393714814 0.5516747675347186 6 1.1574405669653929 0.43222694682953383 7 0.798617748275093 0.3479356156029725 8 0.5151705620984541 0.2565091812717699 9 0.3679351614972183 0.20609890826030955 >10 2.5534597797242946 3.379947493837853 >50 1.0583565350105872 4.9532071149120345 >100 4.571058526045242 65.71650946471456 >500 0.36542182353142044 14.634886624706853 >1k 0.029067644903890303 2.369520555373908 >5k 1.1864344858730735E-4 0.04307225676011333 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 7.452704329775136E-4 0.0 0.0 0.0 0.0 12 0.003248254151279352 0.0 0.0 0.0 0.0 13 0.004098987381376325 0.0 0.0 0.0 0.0 14 0.019039550306633082 0.0 0.0 0.0 0.0 15 0.037685372837353515 0.0 0.0 0.0 0.0 16 0.04930737307991795 0.0 0.0 0.0 0.0 17 0.05817327889109384 0.0 0.0 0.0 0.0 18 0.0660900195281946 0.0 0.0 0.0 0.0 19 0.07447079647262098 0.0 0.0 0.0 0.0 20 0.08467256438064336 0.0 0.0 0.0 0.0 21 0.09523993665201319 0.0 0.0 0.0 0.0 22 0.10691818371970802 0.0 0.0 0.0 0.0 23 0.12053694625440088 0.0 0.0 0.0 0.0 24 0.1339939991668439 0.0 0.0 0.0 0.0 25 0.14770416279237364 0.0 0.0 0.0 0.0 26 0.1634251504163144 0.0 0.0 0.0 0.0 27 0.1798210999418197 0.0 0.0 0.0 0.0 28 0.1959147227822492 0.0 0.0 0.0 0.0 29 0.21458866872553484 0.0 0.0 0.0 0.0 30 0.2344508288496997 0.0 0.0 0.0 0.0 31 0.25259746080738804 0.0 0.0 0.0 0.0 32 0.2686207751164046 0.0 0.0 0.0 0.0 33 0.28268248139899915 0.0 0.0 0.0 0.0 34 0.2968707430381371 0.0 0.0 0.0 0.0 35 0.3096458031958743 0.0 0.0 0.0 0.0 36 0.32195682704628587 0.0 0.0 0.0 0.0 37 0.3341412955401541 0.0 0.0 0.0 0.0 38 0.3484139274169876 0.0 0.0 0.0 0.0 39 0.3681073470657613 0.0 0.0 0.0 0.0 40 0.4001610065369357 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTA 18015 0.0 44.544544 2 ACCGTAT 52790 0.0 44.52737 3 TTACGTA 44955 0.0 44.48048 2 ATTACGT 8730 0.0 44.419247 1 CCGTATT 187350 0.0 44.374596 4 TTGGGGC 222650 0.0 44.349247 9 TACTCGT 8305 0.0 44.33835 1 GACGTAT 74340 0.0 44.326202 3 ATCGTAT 124435 0.0 44.3143 3 CGCGTAT 78185 0.0 44.29379 3 TCGTATT 594605 0.0 44.27908 4 TTCGTAT 225440 0.0 44.271736 3 AAATCGT 6240 0.0 44.267628 1 TTTCGTA 82960 0.0 44.261692 2 GCGCGTA 27825 0.0 44.255886 2 CGACGTA 14390 0.0 44.241833 2 AACGTAT 74640 0.0 44.24049 3 ATTCGTA 43785 0.0 44.22976 2 TCCGTAT 69785 0.0 44.226837 3 AAACGTA 16710 0.0 44.224415 2 >>END_MODULE