##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527952_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13995547 Sequences flagged as poor quality 0 Sequence length 59 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.020612341911324 31.0 31.0 33.0 30.0 33.0 2 31.598719506997476 31.0 31.0 34.0 30.0 34.0 3 32.00044892850562 31.0 31.0 34.0 30.0 34.0 4 35.792515933818095 37.0 35.0 37.0 35.0 37.0 5 35.872716157503525 37.0 35.0 37.0 35.0 37.0 6 35.84543598045864 37.0 35.0 37.0 35.0 37.0 7 33.92465832167903 35.0 33.0 35.0 31.0 37.0 8 34.95453282390463 35.0 35.0 37.0 33.0 37.0 9 37.665148564754205 39.0 37.0 39.0 35.0 39.0 10 37.88334110842541 39.0 37.0 39.0 35.0 39.0 11 36.824395502369434 37.0 37.0 39.0 34.0 39.0 12 37.6449777204135 39.0 37.0 39.0 35.0 39.0 13 37.84502284905334 39.0 37.0 39.0 35.0 39.0 14 38.29527470416126 40.0 38.0 40.0 35.0 40.0 15 37.57582794012981 40.0 37.0 40.0 33.0 40.0 16 36.666411252093255 38.0 35.0 40.0 31.0 40.0 17 36.548177002299376 39.0 35.0 40.0 31.0 40.0 18 36.50992997987146 39.0 35.0 40.0 31.0 40.0 19 36.77203527664906 39.0 35.0 40.0 31.0 40.0 20 36.90033222710052 39.0 35.0 40.0 31.0 40.0 21 36.82001067911101 39.0 35.0 40.0 31.0 40.0 22 36.79199734029688 39.0 35.0 40.0 31.0 40.0 23 36.743177526394646 39.0 35.0 40.0 31.0 40.0 24 36.67708321796926 39.0 35.0 40.0 31.0 40.0 25 36.64259860654249 39.0 35.0 40.0 31.0 40.0 26 36.51502002744159 39.0 35.0 40.0 30.0 40.0 27 36.41505258779811 39.0 35.0 40.0 30.0 40.0 28 36.42866870441005 39.0 35.0 40.0 30.0 40.0 29 36.39636864496972 39.0 35.0 40.0 30.0 40.0 30 36.35223896572246 39.0 35.0 40.0 30.0 40.0 31 36.33509186886372 39.0 35.0 40.0 30.0 40.0 32 36.18960902349869 38.0 35.0 40.0 30.0 40.0 33 36.02693549598312 38.0 35.0 40.0 30.0 40.0 34 35.92081974359416 38.0 35.0 40.0 30.0 40.0 35 35.76231732850456 38.0 34.0 40.0 29.0 40.0 36 35.57139838835881 38.0 34.0 40.0 29.0 40.0 37 35.374282548584915 38.0 34.0 40.0 28.0 40.0 38 35.03138141010137 37.0 33.0 40.0 26.0 40.0 39 34.9198499351258 37.0 33.0 40.0 26.0 40.0 40 34.78976227224273 37.0 33.0 40.0 26.0 40.0 41 34.68195798277838 37.0 33.0 40.0 26.0 40.0 42 34.56329831195594 36.0 33.0 40.0 26.0 40.0 43 34.317120224025544 36.0 33.0 40.0 26.0 40.0 44 34.12652653018849 35.0 33.0 39.0 25.0 40.0 45 33.923242728562165 35.0 33.0 39.0 24.0 40.0 46 33.73440838003688 35.0 33.0 39.0 24.0 40.0 47 33.58244411597489 35.0 33.0 39.0 23.0 40.0 48 33.36838724488582 35.0 32.0 38.0 23.0 40.0 49 33.229262636179925 35.0 32.0 38.0 23.0 40.0 50 33.00634015948073 35.0 32.0 38.0 23.0 40.0 51 32.8389684233135 35.0 32.0 37.0 23.0 40.0 52 32.6268900386673 35.0 31.0 37.0 23.0 40.0 53 32.415976095825336 35.0 31.0 37.0 23.0 39.0 54 32.26162021391519 35.0 31.0 36.0 22.0 39.0 55 32.10421443334798 35.0 31.0 36.0 22.0 39.0 56 31.903170344110166 34.0 31.0 36.0 21.0 39.0 57 31.74905539597702 34.0 31.0 35.0 21.0 39.0 58 31.53314779336599 34.0 31.0 35.0 20.0 38.0 59 31.006750575736696 34.0 30.0 35.0 20.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 6.0 13 19.0 14 75.0 15 310.0 16 1261.0 17 3469.0 18 7910.0 19 15754.0 20 27745.0 21 42709.0 22 61547.0 23 84449.0 24 112896.0 25 147900.0 26 187508.0 27 234710.0 28 286118.0 29 340448.0 30 407861.0 31 499943.0 32 620598.0 33 799701.0 34 1203220.0 35 1612546.0 36 1863169.0 37 2589849.0 38 2525513.0 39 318309.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.563106536671985 19.654480099991805 33.225489507484056 18.55692385585215 2 28.164594066955722 20.301721683332563 33.823029567904705 17.710654681807007 3 22.652019245835834 22.020897075334034 35.20887036426657 20.118213314563555 4 22.350887750225127 25.52139619837653 39.35789004888483 12.769826002513513 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 100.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 0.0 100.0 0.0 11 99.55155021808008 0.32841874633410184 0.10412597664099875 0.01590505894482009 12 99.73283645147988 0.20032085919900094 0.04534299373936581 0.02149969558174468 13 99.2382648566719 0.3986267917931325 0.105512131823072 0.25759621971188407 14 67.2522267261151 20.503142892521456 4.517093901367343 7.727536479996101 15 38.405772921915805 23.91121261641292 16.005176503640765 21.67783795803051 16 31.283064534740944 16.70739271569736 25.93684977085926 26.072692978702438 17 25.371505665337697 15.275230042812904 28.387250601923597 30.966013689925802 18 23.99398894519807 16.258985804556264 31.133609854620186 28.61341539562548 19 27.466564900964567 15.306204180515417 28.50303743040554 28.72419348811447 20 32.610179509239615 15.564815008659542 24.309682215350353 27.515323266750492 21 33.281678808266655 17.624448690715695 21.51903030299566 27.574842198021987 22 32.82703419880623 18.290217595639525 21.49879529538931 27.383952910164925 23 32.19156064425349 19.710576514086945 20.51730453979398 27.580558301865587 24 31.53725252753608 21.795546826429863 20.161720009943163 26.505480636090894 25 32.94215653021636 19.603170922865683 21.990744627559035 25.46392791935892 26 31.694995558230055 18.63704934147983 22.27538516358096 27.392569936709155 27 32.713240861539745 19.720201003933607 20.83248336060034 26.73407477392631 28 34.05718976185783 17.58022748235564 20.154617750917488 28.207965004869052 29 31.480305842994206 17.380363911464126 20.108738872442785 31.030591373098886 30 29.68796432179464 16.912486521605764 21.968137436857596 31.431411719742 31 28.987820197381353 17.20189285920729 21.228487889755222 32.581799053656134 32 31.030855742901654 20.77778739194688 19.740071609919926 28.45128525523154 33 32.17080404217141 20.518254842057978 19.378413719735285 27.932527396035322 34 32.03023075839766 19.504711034159648 21.10936428565457 27.35569392178812 35 35.028298643847215 19.486698161922504 19.46250475240446 26.02249844182582 36 37.71955465549149 18.714674031675933 18.887871978137046 24.677899334695528 37 36.73355532298952 18.760124202362366 20.752665115554255 23.753655359093862 38 31.797399558588168 21.725846085186955 24.039503422052743 22.437250934172134 39 32.333091375421056 23.649422205505793 22.307602553869454 21.709883865203697 40 31.58973350595014 25.181702437210923 18.965318040088036 24.2632460167509 41 33.501327243586836 23.895900603241873 17.988471618865628 24.61430053430566 42 35.13027393641706 23.171563069310547 17.538221264234974 24.159941730037417 43 34.20215730046136 21.856566234960304 17.804677444904442 26.136599019673902 44 31.78417392332004 21.95176794447548 18.42981199663007 27.834246135574407 45 29.020266231823594 21.759914064094815 19.79516056071263 29.42465914336896 46 28.392116435320464 19.606479117965165 21.263370413460798 30.738034033253577 47 29.139111175861864 17.216690423032414 23.199178996004942 30.44501940510078 48 30.34836723423529 17.181221998682865 22.118056550415645 30.3523542166662 49 31.596099816605953 18.787711548537544 21.531212749312335 28.084975885544168 50 29.892779467640672 21.49423670257404 20.90185542587224 27.711128403913044 51 29.384367756401375 20.67678383703045 21.919614860355228 28.019233546212952 52 29.948904462255033 19.622434192818616 23.92678185425693 26.501879490669427 53 30.55970588359283 19.56663072904546 22.34229215907031 27.531371228291402 54 28.473785268985914 19.969144471452243 22.314383282053928 29.242686977507915 55 28.223141260573808 20.333317447328067 23.04582307501093 28.397718217087192 56 28.651377470276795 19.734069700884145 22.476427680890215 29.138125147948845 57 28.09999494839323 19.273873325565624 23.765694902814445 28.860436823226703 58 27.423522639022252 19.24835806703375 24.948814076363004 28.379305217580992 59 27.414891322218416 19.481532233073846 22.742012155723533 30.361564288984205 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 2.0 5 3.0 6 5.5 7 8.0 8 212.0 9 734.0 10 1052.0 11 1523.5 12 1995.0 13 2117.0 14 2414.0 15 2589.0 16 2949.0 17 3309.0 18 3512.0 19 4729.0 20 5743.0 21 7820.0 22 9897.0 23 13960.5 24 18024.0 25 22711.0 26 31149.5 27 34901.0 28 39680.5 29 44460.0 30 49243.0 31 56344.5 32 58663.0 33 62624.0 34 66585.0 35 71082.5 36 80389.0 37 85198.0 38 94530.5 39 103863.0 40 119975.5 41 136088.0 42 151282.5 43 188720.5 44 210964.0 45 235807.5 46 260651.0 47 305355.5 48 392997.5 49 435935.0 50 511748.0 51 587561.0 52 666190.0 53 868139.0 54 991459.0 55 1127382.0 56 1263305.0 57 1357015.5 58 1465993.0 59 1481260.0 60 1378238.5 61 1275217.0 62 1152637.0 63 1030057.0 64 950618.5 65 752194.0 66 633208.0 67 556151.5 68 479095.0 69 429658.0 70 332470.5 71 284720.0 72 235822.0 73 186924.0 74 141202.5 75 71446.5 76 47412.0 77 33032.5 78 18653.0 79 13486.5 80 8320.0 81 6014.0 82 2641.5 83 1575.0 84 1038.5 85 502.0 86 346.5 87 134.5 88 78.0 89 54.0 90 30.0 91 17.5 92 2.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1.3995547E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.155208944799243 #Duplication Level Percentage of deduplicated Percentage of total 1 79.35680183511057 8.852417056616863 2 7.782017827268009 1.7362006975065452 3 3.3812682659369244 1.131562620148362 4 1.8881597782258785 0.842512673891019 5 1.0868672341171461 0.60621155459164 6 0.7414222019259932 0.4962431747278554 7 0.5068874670561946 0.39581049245583255 8 0.3311424302966464 0.2955170400358168 9 0.24278042923797932 0.24374397742719356 >10 1.4562493789889381 3.397174130857254 >50 0.587019436735015 4.93476917778021 >100 2.444892546275975 62.18378885010652 >500 0.18160713145951504 12.9960190628851 >1k 0.012819293458857635 1.8464289390993007 >5k 6.474390635641565E-5 0.041600551870559936 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 6.216262929916209E-4 0.0 0.0 0.0 0.0 12 0.002865197051605057 0.0 0.0 0.0 0.0 13 0.0037369028877542263 0.0 0.0 0.0 0.0 14 0.017862824511253473 0.0 0.0 0.0 0.0 15 0.034875378575771276 0.0 0.0 0.0 0.0 16 0.04571454048919989 0.0 0.0 0.0 0.0 17 0.05409577774988002 0.0 0.0 0.0 0.0 18 0.06129092346301292 0.0 0.0 0.0 0.0 19 0.06917914676718245 0.0 0.0 0.0 0.0 20 0.07833920317655323 0.0 0.0 0.0 0.0 21 0.08829951412402816 0.0 0.0 0.0 0.0 22 0.09909580525862977 0.0 0.0 0.0 0.0 23 0.11177841066161973 0.0 0.0 0.0 0.0 24 0.12459677353089522 0.0 0.0 0.0 0.0 25 0.13752945847704273 0.0 0.0 0.0 0.0 26 0.15119809179305388 0.0 0.0 0.0 0.0 27 0.16570270529619172 0.0 0.0 0.0 0.0 28 0.18065031684720861 0.0 0.0 0.0 0.0 29 0.1974628072772004 0.0 0.0 0.0 0.0 30 0.21592582269203198 0.0 0.0 0.0 0.0 31 0.23268829721339224 0.0 0.0 0.0 0.0 32 0.2475287318173416 0.0 0.0 0.0 0.0 33 0.26047570702309814 0.0 0.0 0.0 0.0 34 0.27297968418097557 0.0 0.0 0.0 0.0 35 0.28468340680074883 0.0 0.0 0.0 0.0 36 0.29565832618046295 0.0 0.0 0.0 0.0 37 0.30629742445936553 0.0 0.0 0.0 0.0 38 0.3194587535592571 0.0 0.0 0.0 0.0 39 0.33717153034461605 0.0 0.0 0.0 0.0 40 0.3657520495626216 0.0 0.0 0.0 0.0 41 0.3889808665570556 0.0 0.0 0.0 0.0 42 0.4059362595831374 0.0 0.0 0.0 0.0 43 0.42014077763448615 0.0 0.0 0.0 0.0 44 0.4332592359555507 0.0 0.0 0.0 0.0 45 0.44952155139059585 0.0 0.0 0.0 0.0 46 0.4665055249358957 0.0 0.0 0.0 7.145129804501389E-6 47 0.47960254786754675 0.0 0.0 0.0 7.145129804501389E-6 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTA 14640 0.0 51.660522 2 AAATCGT 6200 0.0 51.204838 1 TTTCGTA 79970 0.0 51.164185 2 CGCGTAT 78345 0.0 51.11258 3 GACGTAT 74650 0.0 51.100803 3 ATTACGT 8575 0.0 51.083965 1 CCGTATT 185995 0.0 51.07941 4 ACACGTA 18170 0.0 51.06026 2 ACCGTAT 52400 0.0 51.05296 3 TTACGTA 44775 0.0 51.05282 2 TTGGGGC 217140 0.0 51.042465 9 ATACGTA 26075 0.0 50.947075 2 TTCGTAT 219395 0.0 50.9116 3 AACGTAT 76260 0.0 50.911552 3 ATTCGTA 42465 0.0 50.89073 2 ACGTATT 371440 0.0 50.88679 4 TCGTATT 572150 0.0 50.830997 4 ATTGGGG 972095 0.0 50.830322 8 CGTATTG 1453950 0.0 50.797546 5 TCCGTAT 69420 0.0 50.79739 3 >>END_MODULE