##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527951_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1085025 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.678904172714915 31.0 31.0 34.0 27.0 34.0 2 31.606551922766755 31.0 31.0 34.0 28.0 34.0 3 31.84479435957697 33.0 31.0 34.0 30.0 34.0 4 35.35761480150227 37.0 35.0 37.0 33.0 37.0 5 35.61115734660492 37.0 35.0 37.0 33.0 37.0 6 35.37209096564595 37.0 35.0 37.0 32.0 37.0 7 35.85051127854197 37.0 35.0 37.0 35.0 37.0 8 35.8207396142946 37.0 35.0 37.0 35.0 37.0 9 37.16376949839866 39.0 37.0 39.0 33.0 39.0 10 37.45365590654593 39.0 37.0 39.0 34.0 39.0 11 38.07946084191609 39.0 38.0 39.0 35.0 39.0 12 38.12875555862768 39.0 39.0 39.0 37.0 39.0 13 37.91585263012373 39.0 38.0 39.0 35.0 39.0 14 38.07370244925232 40.0 38.0 40.0 33.0 40.0 15 37.086646851455036 39.0 36.0 40.0 31.0 40.0 16 37.265361627612265 39.0 36.0 40.0 32.0 40.0 17 37.018705559779725 39.0 36.0 40.0 31.0 40.0 18 37.16560355752171 39.0 36.0 40.0 32.0 40.0 19 37.34798829520057 39.0 36.0 40.0 32.0 40.0 20 36.95842031289602 39.0 36.0 40.0 32.0 40.0 21 37.025105412317686 39.0 36.0 40.0 32.0 40.0 22 37.25328909472132 39.0 36.0 40.0 32.0 40.0 23 36.66790903435405 39.0 35.0 40.0 30.0 40.0 24 37.18148798414783 39.0 36.0 40.0 32.0 40.0 25 37.433225040897675 39.0 37.0 40.0 32.0 40.0 26 37.307158821225315 40.0 36.0 40.0 32.0 40.0 27 37.2391898804175 39.0 36.0 40.0 32.0 40.0 28 36.894834681228545 39.0 35.0 40.0 31.0 40.0 29 36.792219534112114 39.0 35.0 40.0 31.0 40.0 30 36.55105458399576 39.0 35.0 40.0 31.0 40.0 31 36.31031174396903 39.0 35.0 40.0 30.0 40.0 32 36.22755789037119 39.0 35.0 40.0 30.0 40.0 33 36.15770051381305 39.0 35.0 40.0 30.0 40.0 34 35.85565586046405 39.0 35.0 40.0 29.0 40.0 35 35.7619483422041 39.0 35.0 40.0 28.0 40.0 36 35.20576392249026 38.0 35.0 40.0 25.0 40.0 37 34.93562821133153 38.0 34.0 40.0 24.0 40.0 38 34.62699845625677 38.0 34.0 40.0 22.0 40.0 39 34.22787954194604 38.0 33.0 40.0 21.0 40.0 40 33.70572659616138 37.0 33.0 40.0 18.0 40.0 41 33.35211907559734 36.0 33.0 40.0 17.0 40.0 42 32.91329232045344 35.0 33.0 40.0 15.0 40.0 43 32.546758830441696 35.0 32.0 40.0 14.0 40.0 44 32.23580101840972 35.0 31.0 40.0 12.0 40.0 45 31.778426303541394 35.0 31.0 39.0 10.0 40.0 46 31.465558858090827 35.0 30.0 39.0 10.0 40.0 47 31.019472362387962 35.0 28.0 39.0 10.0 40.0 48 30.488434828690583 35.0 26.0 38.0 9.0 40.0 49 30.013347157899588 35.0 26.0 38.0 9.0 40.0 50 29.395538351650885 35.0 23.0 37.0 8.0 40.0 51 28.970693762816524 35.0 22.0 37.0 8.0 40.0 52 28.273195548489667 34.0 20.0 36.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 1.0 14 6.0 15 13.0 16 35.0 17 98.0 18 302.0 19 642.0 20 1468.0 21 2578.0 22 4289.0 23 6864.0 24 10235.0 25 14532.0 26 20002.0 27 25409.0 28 31759.0 29 37781.0 30 41047.0 31 42237.0 32 44033.0 33 51741.0 34 69102.0 35 97619.0 36 108903.0 37 193606.0 38 220333.0 39 60387.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.507131172092812 22.533858666850996 38.92269763369507 8.03631252736112 2 27.140204142761686 20.73998294970162 34.173129651390525 17.946683256146173 3 26.381327619179277 22.152669293334252 32.72108937582083 18.74491371166563 4 25.869726503997605 21.173797838759477 38.41487523328956 14.541600423953366 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 100.0 0.0 0.0 10 100.0 0.0 0.0 0.0 11 95.74313955899633 3.8115250800672795 0.2740950669339416 0.17124029400244234 12 96.6458837353978 1.6505610469804846 1.0631091449505772 0.6404460726711366 13 91.36029123752908 5.098868689661529 1.6945231676689476 1.8463169051404345 14 36.633902444644136 46.34354047141771 7.853183106380038 9.16937397755812 15 21.998571461487064 57.211308495195965 11.800926245939033 8.989193797377942 16 48.870947674016726 28.352802930808046 12.515932812608005 10.260316582567222 17 17.78935969217299 27.235962305016017 25.409921430381786 29.564756572429207 18 19.182691643049697 42.910071196516206 23.68839427662957 14.21884288380452 19 42.72104329393332 28.111702495334207 20.475933734245753 8.691320476486716 20 20.74035160480173 34.4411419091726 33.77710191009424 11.04140457593143 21 36.48321467247298 25.774613488168473 22.53183106380037 15.210340775558167 22 43.742033593696 28.068201193520885 14.945830741227162 13.243934471555955 23 17.65231215870602 26.728785051035693 28.025529365682818 27.593373424575468 24 20.023962581507337 40.16110227874934 13.479781571853183 26.335153567890142 25 18.842883804520632 27.05016013455911 36.05612773899219 18.050828321928066 26 16.622197645215547 39.188497960876475 14.197276560447916 29.99202783346006 27 30.973111218635513 42.48086449620976 13.702080597221261 12.843943687933457 28 32.069767977696365 41.73737932305707 12.855279832261928 13.337572866984631 29 33.59876500541462 28.892698324923387 11.337618948872146 26.170917720789845 30 42.48501186608603 30.873021358954862 12.90772102025299 13.734245754706112 31 23.08306260224419 39.06343171816318 13.786779106472203 24.066726573120434 32 21.972857768254187 53.42549710836156 12.697311121863553 11.904334001520702 33 31.96000092163775 44.63482408239442 11.0226953296007 12.382479666367134 34 18.4068569848621 55.17541070482247 12.284786064837215 14.132946245478214 35 27.302228059261306 45.051404345521995 14.008340821640056 13.638026773576645 36 17.35858620769107 45.3923181493514 24.00313356835096 13.245962074606577 37 19.20287550978088 48.715467385544116 17.614248519619363 14.467408585055644 38 21.443837699592176 46.85403562129905 17.037303287942674 14.6648233911661 39 20.691228312711686 47.44286997995438 16.536024515564158 15.329877191769775 40 22.83477339231815 46.34538374691827 16.269210386857445 14.55063247390613 41 29.019700006912284 42.83910508974448 13.453791387295224 14.687403516048017 42 18.85661620699984 44.63786548697035 12.516670122808229 23.988848183221585 43 18.350821409644936 44.19704615101034 14.457547061127624 22.994585378217092 44 18.214787677703278 45.7152600170503 22.933019976498237 13.136932328748186 45 19.515402870901593 53.131126010921406 14.552475749406696 12.800995368770304 46 29.032695099191265 44.667450058754405 13.696182115619457 12.603672726434874 47 30.341697195917146 44.75472915370614 12.955185364392527 11.948388285984194 48 27.87180018893574 45.571484528006266 13.189281352964215 13.367433930093778 49 25.746687864334923 47.71779452086358 13.396557683002698 13.138959931798807 50 19.994562337273337 52.30358747494297 14.788507177253981 12.913343010529713 51 19.793737471486832 52.54219948849105 14.36943849220064 13.29462454782148 52 23.548950485011865 48.2586115527292 13.198682058017097 14.993755904241837 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 4.5 10 8.0 11 129.0 12 250.0 13 865.0 14 2851.5 15 4223.0 16 4944.0 17 5665.0 18 5021.5 19 4378.0 20 4210.0 21 4042.0 22 4708.5 23 5375.0 24 6795.0 25 8215.0 26 10530.0 27 12845.0 28 15991.0 29 19137.0 30 23444.0 31 27751.0 32 33962.0 33 40173.0 34 47866.5 35 55560.0 36 58377.5 37 61195.0 38 57992.0 39 49782.5 40 44776.0 41 41397.5 42 38019.0 43 38554.0 44 39089.0 45 38949.0 46 38809.0 47 41009.0 48 43209.0 49 49632.0 50 56055.0 51 63945.0 52 71835.0 53 83423.5 54 95012.0 55 97313.5 56 99615.0 57 93764.0 58 87913.0 59 74428.0 60 60943.0 61 50038.0 62 39133.0 63 33860.0 64 21797.5 65 15008.0 66 11738.5 67 8469.0 68 5939.5 69 3410.0 70 3571.0 71 3732.0 72 3293.5 73 2855.0 74 2371.0 75 1887.0 76 1161.5 77 436.0 78 710.0 79 984.0 80 544.0 81 104.0 82 61.0 83 18.0 84 14.5 85 11.0 86 8.0 87 5.0 88 14.0 89 12.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1085025.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.417395992600014 #Duplication Level Percentage of deduplicated Percentage of total 1 80.87377496431719 37.53950037935132 2 7.9649910439221285 7.39428286726492 3 3.0669453815432646 4.270788547883083 4 1.7463056158733787 3.242358371843835 5 1.154235190665842 2.678829595686528 6 0.8065641021285788 2.246316319315087 7 0.6039284547962243 1.9622950366232763 8 0.4535323273249164 1.6841431706308905 9 0.40196232644763424 1.679224003274394 >10 2.7312671657523815 23.08581849650419 >50 0.11171816683273172 3.507097595708106 >100 0.07579905645745688 7.659267704159649 >500 0.007779376746559799 2.349732173046945 >1k 0.0011968271917784307 0.7003457387078214 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CACTGCCTAGGGGGTGGGTGGATCACAAGGTCAGAAGTTCAAGATCAGCTTG 1392 0.12829197483928942 No Hit GTTGGCCTAGGGAAGCAGTGGGGGAAAGGTTAACACTTCGGAGGCTGAGGAG 1279 0.11787746826109997 No Hit CTTAGCCTAGGGGTGAGGCAGATGGACCACTTGAGGTCAGTTCAAGACCAGC 1268 0.11686366673578949 No Hit GGTGGCCTAGGGGGATCACGAGGTCAAGAGGTCAAGACCATCCTGGCCAACG 1229 0.11326927950968872 No Hit TTGGGCCTAGAGGGGGCCCCTCGGAGCTGGAAATGCAACTCTCGGGATCCTC 1223 0.11271629685951938 No Hit GAATGCCTAGGGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGGGACGG 1173 0.10810810810810811 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.676205617382088 0.0 0.0 0.0 0.0 10 0.676205617382088 0.0 0.0 0.0 0.0 11 0.6883712356858137 0.0 0.0 0.0 0.0 12 0.7395221308264787 0.0 0.0 0.0 0.0 13 0.8670767954655423 0.0 0.0 0.0 0.0 14 1.5556323587014125 0.0 0.0 0.0 0.0 15 1.9940554365106795 0.0 0.0 0.0 0.0 16 2.275523605446879 0.0 0.0 0.0 0.0 17 2.57146148706251 0.0 0.0 0.0 0.0 18 3.280753899679731 0.0 0.0 0.0 0.0 19 3.523881938204189 0.0 0.0 0.0 0.0 20 3.6800073731020024 0.0 0.0 0.0 0.0 21 3.853459597705122 0.0 0.0 0.0 0.0 22 4.014377548904403 0.0 0.0 0.0 0.0 23 4.167461579226285 0.0 0.0 0.0 0.0 24 4.386442708693348 0.0 0.0 0.0 0.0 25 4.590585470380867 0.0 0.0 0.0 0.0 26 4.884772240270961 0.0 0.0 0.0 0.0 27 5.121540978318472 0.0 0.0 0.0 0.0 28 5.425220617036474 0.0 0.0 0.0 0.0 29 5.618488053270662 0.0 0.0 0.0 0.0 30 5.899403239556692 0.0 0.0 0.0 0.0 31 6.202529895624525 0.0 0.0 0.0 0.0 32 6.825557014815327 0.0 0.0 0.0 0.0 33 7.067302596714361 0.0 0.0 0.0 0.0 34 7.388401188912698 0.0 0.0 0.0 0.0 35 7.587382779198636 0.0 0.0 0.0 0.0 36 7.822953388170779 0.0 0.0 0.0 0.0 37 8.047925163014677 0.0 0.0 0.0 0.0 38 8.25492500172807 0.0 0.0 0.0 0.0 39 8.504596668279532 0.0 0.0 0.0 0.0 40 8.790027879541945 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAG 105 0.0 46.000004 16 CCTTCGA 35 1.0195072E-7 46.000004 21 GTGTTCA 55 1.8189894E-12 46.000004 34 TACCCGT 35 1.0195072E-7 46.000004 39 GATGTTA 35 1.0195072E-7 46.000004 24 CATATAT 35 1.0195072E-7 46.000004 40 CCCTATT 70 0.0 46.000004 27 CTATCGC 70 0.0 46.000004 20 ATTACCC 70 0.0 46.000004 31 TATATTA 35 1.0195072E-7 46.000004 42 TACGGTT 35 1.0195072E-7 46.000004 37 CGATTCT 35 1.0195072E-7 46.000004 25 CGATTAC 35 1.0195072E-7 46.000004 29 TAACGAG 70 0.0 46.000004 20 ACTTAGG 110 0.0 46.000004 23 TCCTAGT 70 0.0 46.000004 26 ATGTAGC 35 1.0195072E-7 46.000004 34 CGTTAGG 35 1.0195072E-7 46.000004 30 ACCTATG 35 1.0195072E-7 46.000004 15 ATATATT 35 1.0195072E-7 46.000004 41 >>END_MODULE