##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527950_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1083175 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.591233180234035 31.0 31.0 34.0 26.0 34.0 2 31.42559050938214 31.0 31.0 34.0 28.0 34.0 3 31.771273339949683 33.0 31.0 34.0 30.0 34.0 4 35.329027165508805 37.0 35.0 37.0 33.0 37.0 5 35.60453758626261 37.0 35.0 37.0 33.0 37.0 6 35.362993052830795 37.0 35.0 37.0 32.0 37.0 7 35.85276986636509 37.0 35.0 37.0 35.0 37.0 8 35.78143790246267 37.0 35.0 37.0 35.0 37.0 9 37.158875527961776 39.0 37.0 39.0 33.0 39.0 10 37.44562789946223 39.0 37.0 39.0 34.0 39.0 11 38.07136427631731 39.0 38.0 39.0 35.0 39.0 12 38.11907124887484 39.0 39.0 39.0 37.0 39.0 13 37.92164424031205 39.0 38.0 39.0 35.0 39.0 14 38.10631430747571 40.0 38.0 40.0 33.0 40.0 15 37.131268723890415 39.0 36.0 40.0 31.0 40.0 16 37.31668474623214 39.0 36.0 40.0 32.0 40.0 17 37.09719297435779 39.0 36.0 40.0 32.0 40.0 18 37.25834883559905 39.0 36.0 40.0 32.0 40.0 19 37.440301890276274 39.0 37.0 40.0 33.0 40.0 20 37.0283813788169 39.0 36.0 40.0 32.0 40.0 21 37.289089020703024 39.0 36.0 40.0 32.0 40.0 22 37.41421930897593 39.0 36.0 40.0 32.0 40.0 23 36.79763842407736 39.0 35.0 40.0 31.0 40.0 24 37.305968103030445 39.0 36.0 40.0 32.0 40.0 25 37.38135019733653 40.0 36.0 40.0 32.0 40.0 26 37.22327601726406 39.0 36.0 40.0 32.0 40.0 27 37.22294827705588 39.0 36.0 40.0 32.0 40.0 28 36.722143697925084 39.0 35.0 40.0 31.0 40.0 29 36.71915618436541 39.0 35.0 40.0 31.0 40.0 30 36.561478985390174 39.0 35.0 40.0 31.0 40.0 31 36.363165693447506 39.0 35.0 40.0 30.0 40.0 32 36.276881390357055 39.0 35.0 40.0 30.0 40.0 33 36.19096914164378 39.0 35.0 40.0 30.0 40.0 34 35.92135527500173 39.0 35.0 40.0 30.0 40.0 35 35.77152906963325 39.0 35.0 40.0 28.0 40.0 36 34.835152214554434 38.0 34.0 40.0 24.0 40.0 37 34.79458720889976 38.0 34.0 40.0 23.0 40.0 38 34.59272139774275 38.0 34.0 40.0 22.0 40.0 39 34.23396865695756 38.0 33.0 40.0 21.0 40.0 40 33.72012094075288 37.0 33.0 40.0 18.0 40.0 41 33.405789461536685 36.0 33.0 40.0 17.0 40.0 42 32.821044614212845 35.0 33.0 40.0 15.0 40.0 43 32.47093221316962 35.0 32.0 40.0 14.0 40.0 44 32.17172756018187 35.0 31.0 40.0 12.0 40.0 45 31.50378470699564 35.0 30.0 39.0 10.0 40.0 46 31.332376578115262 35.0 30.0 39.0 10.0 40.0 47 30.986873773859255 35.0 28.0 39.0 10.0 40.0 48 30.47372954508736 35.0 26.0 38.0 9.0 40.0 49 30.01333764165532 35.0 26.0 38.0 9.0 40.0 50 29.316803840561313 35.0 23.0 37.0 8.0 40.0 51 28.98798070487225 35.0 22.0 37.0 8.0 40.0 52 28.37389526161516 34.0 20.0 36.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 6.0 15 13.0 16 31.0 17 116.0 18 273.0 19 644.0 20 1412.0 21 2481.0 22 4262.0 23 6860.0 24 10218.0 25 14545.0 26 19461.0 27 25562.0 28 32216.0 29 37995.0 30 41271.0 31 41797.0 32 44497.0 33 52148.0 34 69133.0 35 97308.0 36 110834.0 37 194062.0 38 215013.0 39 61012.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.463960117247908 22.64047822374039 38.770558773974656 8.125002885037045 2 27.33916495487802 20.834121910125326 33.92951277494403 17.897200360052622 3 26.381148013940496 22.083042906270915 32.87418930459067 18.661619775197913 4 25.844484963186925 21.173402266485102 38.37865534193459 14.60345742839338 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 100.0 0.0 0.0 10 100.0 0.0 0.0 0.0 11 95.78092182703625 3.7751979135412097 0.26773143767165974 0.17614882175087127 12 96.65695755533501 1.672952200706257 1.036028342603919 0.6340619013548133 13 91.3228241050615 5.124656680591779 1.7361922127080112 1.8163270016387012 14 36.51127472476747 46.48611720174487 7.850347358460083 9.15226071502758 15 21.975488725275234 57.15595356244374 11.849608788976852 9.018948923304174 16 48.861910586931934 28.328940383594524 12.526600041544533 10.282548987929005 17 17.828882682853646 27.186096429478155 25.38620259884137 29.598818288826827 18 19.11934821243105 42.993145151983754 23.636900777805987 14.250605857779213 19 42.74618598102799 28.095367784522352 20.472684469268586 8.685761765181065 20 20.769958686269533 34.32815565351859 33.82657465321855 11.07531100699333 21 36.24705149214116 25.96293304406029 22.555173448427077 15.234842015371477 22 43.738915687677434 28.025665289542317 14.997761211253952 13.237657811526299 23 17.675352551526764 26.687746670667252 28.09305975488725 27.543841022918734 24 19.921157707664968 40.22461744408798 13.467537563182312 26.386687285064742 25 18.883375262538372 27.07272601380202 36.02077226671591 18.023126456943707 26 16.72472130542156 39.109839130334436 14.131511528608026 30.033928035635977 27 30.963787015025275 42.63263092298105 13.610450758187733 12.793131303805941 28 32.19341288342142 41.585801001684864 12.922934890483994 13.29785122440972 29 33.640916749371065 28.860802732707086 11.360860433447966 26.137420084473884 30 42.53643224779006 30.840353590140097 12.851293650610474 13.771920511459367 31 23.135412098691347 39.00302351882198 13.739146490640941 24.122417891845732 32 22.000046160592703 53.40503612066379 12.635446719135873 11.959470999607635 33 31.921803955962798 44.686408013478896 11.079557781521915 12.312230249036398 34 18.462759941837653 55.204283703002744 12.190273963117686 14.142682392041914 35 27.476446557573798 44.94786161054308 13.948530939137257 13.627160892745863 36 17.59678722274794 44.70681099545318 24.063701617928775 13.632700163870105 37 19.250167332148546 48.57913079603942 17.707572645232762 14.46312922657927 38 21.44750386594964 46.80619475154061 17.02984282318185 14.716458559327902 39 20.778267592955892 47.30002077226671 16.61292034989729 15.308791284880098 40 22.791423361875967 46.33092528908071 16.285734068825445 14.591917280217878 41 29.076741985367093 42.87497403466661 13.379740115863086 14.668543864103215 42 19.136981558843217 44.27243981812726 12.63766242758557 23.952916195443947 43 18.30036697671198 44.133404112908806 14.5534193459044 23.012809564474807 44 18.421492371962056 45.48295520114478 22.857063724698225 13.238488702194937 45 19.81212638770282 52.642740092782795 14.688023634223462 12.857109885290926 46 29.07415699217578 44.593717543333256 13.758533939575784 12.573591524915178 47 30.262792254252545 44.7530639093406 12.974173148383224 12.009970688023634 48 28.144851939898906 45.46190597087267 13.13776628891915 13.255475800309277 49 25.838207122579455 47.65536501488679 13.503450504304476 13.002977358229279 50 20.156669051630622 52.13654303321255 14.77018948923304 12.93659842592379 51 19.664597133427193 52.641632238557946 14.402658850139636 13.291111777875228 52 23.589724652064533 48.20772266715905 13.268585408636646 14.933967272139775 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 3.0 10 6.0 11 117.5 12 229.0 13 868.0 14 2744.0 15 3981.0 16 4901.0 17 5821.0 18 5157.0 19 4493.0 20 4308.0 21 4123.0 22 4735.5 23 5348.0 24 6591.5 25 7835.0 26 10196.0 27 12557.0 28 15804.5 29 19052.0 30 23252.0 31 27452.0 32 33432.5 33 39413.0 34 47243.5 35 55074.0 36 58182.5 37 61291.0 38 57844.5 39 49666.5 40 44935.0 41 41608.5 42 38282.0 43 38543.0 44 38804.0 45 38732.0 46 38660.0 47 40895.5 48 43131.0 49 49743.0 50 56355.0 51 64197.5 52 72040.0 53 83268.5 54 94497.0 55 97043.5 56 99590.0 57 93957.0 58 88324.0 59 74660.0 60 60996.0 61 50224.5 62 39453.0 63 33833.0 64 21712.0 65 15211.0 66 11866.5 67 8522.0 68 6000.0 69 3478.0 70 3586.5 71 3695.0 72 3316.0 73 2937.0 74 2405.5 75 1874.0 76 1171.0 77 468.0 78 708.0 79 948.0 80 533.5 81 119.0 82 69.0 83 19.0 84 21.0 85 23.0 86 14.0 87 5.0 88 9.5 89 7.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1083175.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.29603775192447 #Duplication Level Percentage of deduplicated Percentage of total 1 80.82606274187334 38.22752514779057 2 8.001827925853055 7.569095113310992 3 3.1618340262726496 4.486266644157317 4 1.7642893096097683 3.3377557517048144 5 1.1521631314757212 2.7246375481325615 6 0.7969771181967032 2.261631592179075 7 0.6121008485849413 2.0264961389860874 8 0.4773855186375701 1.806275480936365 9 0.39525506709408914 1.682459871742933 >10 2.6343116640312454 22.492116432764135 >50 0.09348652410384022 2.9690591350760744 >100 0.07673252458166642 7.796438950889903 >500 0.006377768156168924 1.9374917444736393 >1k 0.0011958315292816732 0.6827504478555302 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CACTGCCTAGGGGGTGGGTGGATCACAAGGTCAGAAGTTCAAGATCAGCTTG 1397 0.12897269600941674 No Hit GGTGGCCTAGGGGGATCACGAGGTCAAGAGGTCAAGACCATCCTGGCCAACG 1236 0.11410898515936946 No Hit GTTGGCCTAGGGAAGCAGTGGGGGAAAGGTTAACACTTCGGAGGCTGAGGAG 1218 0.11244720382209707 No Hit CTTAGCCTAGGGGTGAGGCAGATGGACCACTTGAGGTCAGTTCAAGACCAGC 1177 0.10866203522053224 No Hit TTGGGCCTAGAGGGGGCCCCTCGGAGCTGGAAATGCAACTCTCGGGATCCTC 1145 0.10570775728760357 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.6590809425993029 0.0 0.0 0.0 0.0 10 0.6590809425993029 0.0 0.0 0.0 0.0 11 0.6693285941791492 0.0 0.0 0.0 0.0 12 0.7208438156345928 0.0 0.0 0.0 0.0 13 0.8513859717958778 0.0 0.0 0.0 0.0 14 1.5578276825074433 0.0 0.0 0.0 0.0 15 2.0072472130542156 0.0 0.0 0.0 0.0 16 2.29482770558774 0.0 0.0 0.0 0.0 17 2.6071502758095413 0.0 0.0 0.0 0.0 18 3.3195928635723684 0.0 0.0 0.0 0.0 19 3.5618436540725185 0.0 0.0 0.0 0.0 20 3.7185127057031413 0.0 0.0 0.0 0.0 21 3.8989083019825976 0.0 0.0 0.0 0.0 22 4.062132157776906 0.0 0.0 0.0 0.0 23 4.217324070441064 0.0 0.0 0.0 0.0 24 4.4477577492095 0.0 0.0 0.0 0.0 25 4.640893669074711 0.0 0.0 0.0 0.0 26 4.943614836014494 0.0 0.0 0.0 0.0 27 5.183649918064948 0.0 0.0 0.0 0.0 28 5.474830936829229 0.0 0.0 0.0 0.0 29 5.669628638031712 0.0 0.0 0.0 0.0 30 5.9570244881944285 0.0 0.0 0.0 0.0 31 6.251621390818658 0.0 0.0 0.0 0.0 32 6.875343319408222 0.0 0.0 0.0 0.0 33 7.119809818358068 0.0 0.0 0.0 0.0 34 7.429639716573961 0.0 0.0 0.0 0.0 35 7.619544394950031 0.0 0.0 0.0 0.0 36 7.845823620375286 0.0 0.0 0.0 0.0 37 8.052807718051099 0.0 0.0 0.0 0.0 38 8.25674521660858 0.0 0.0 0.0 0.0 39 8.511274724767466 0.0 0.0 0.0 0.0 40 8.79654718766589 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATAC 35 1.019489E-7 46.000004 45 TCCGCCG 35 1.019489E-7 46.000004 20 TACCATC 70 0.0 46.000004 41 CTATACA 35 1.019489E-7 46.000004 46 TAGAACA 35 1.019489E-7 46.000004 15 CCGGATA 35 1.019489E-7 46.000004 24 TTCGGTA 35 1.019489E-7 46.000004 39 CTACAAC 35 1.019489E-7 46.000004 40 GAACAAT 35 1.019489E-7 46.000004 35 TTACCCT 35 1.019489E-7 46.000004 32 TGAGAGT 35 1.019489E-7 46.000004 44 TCGGTAC 35 1.019489E-7 46.000004 40 TCAACTA 70 0.0 46.000004 25 CCCGACC 35 1.019489E-7 46.000004 34 CGGACAG 20 6.311292E-4 46.0 33 GAAATTG 20 6.311292E-4 46.0 43 TTCTAAT 65 0.0 46.0 24 ACTATAA 25 3.417024E-5 46.0 39 CTCACGC 100 0.0 46.0 39 TCGTTAG 20 6.311292E-4 46.0 29 >>END_MODULE