##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527949_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1107348 Sequences flagged as poor quality 0 Sequence length 59 %GC 46 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.443570584856793 31.0 31.0 34.0 26.0 34.0 2 31.33344079729227 31.0 31.0 34.0 28.0 34.0 3 31.601463135346794 31.0 31.0 34.0 30.0 34.0 4 35.195013672305365 37.0 35.0 37.0 33.0 37.0 5 35.339663773267304 37.0 35.0 37.0 33.0 37.0 6 35.02054277426789 37.0 35.0 37.0 32.0 37.0 7 35.67882725213754 37.0 35.0 37.0 33.0 37.0 8 35.52820071016519 37.0 35.0 37.0 33.0 37.0 9 36.8966928192402 39.0 37.0 39.0 33.0 39.0 10 37.1371321391288 39.0 37.0 39.0 33.0 39.0 11 37.916009240094354 39.0 37.0 39.0 35.0 39.0 12 37.93954565321832 39.0 37.0 39.0 35.0 39.0 13 37.67912255226 39.0 37.0 39.0 35.0 39.0 14 37.51058836065988 40.0 37.0 40.0 32.0 40.0 15 36.53127833345976 38.0 35.0 40.0 31.0 40.0 16 36.77080827346056 39.0 36.0 40.0 31.0 40.0 17 36.31352203643299 38.0 35.0 40.0 30.0 40.0 18 36.490337274280535 38.0 35.0 40.0 30.0 40.0 19 36.7040867008384 39.0 35.0 40.0 31.0 40.0 20 36.43048978279637 39.0 35.0 40.0 30.0 40.0 21 36.66254691388796 39.0 35.0 40.0 31.0 40.0 22 36.77292684865101 39.0 35.0 40.0 31.0 40.0 23 36.26979142961382 39.0 35.0 40.0 30.0 40.0 24 36.71956602621759 39.0 35.0 40.0 31.0 40.0 25 36.764708113438594 39.0 35.0 40.0 31.0 40.0 26 36.512996817621925 39.0 35.0 40.0 30.0 40.0 27 36.394598626628664 39.0 35.0 40.0 30.0 40.0 28 36.05262121753956 38.0 35.0 40.0 30.0 40.0 29 35.93312400437803 38.0 35.0 40.0 30.0 40.0 30 35.6155210466809 38.0 35.0 40.0 28.0 40.0 31 35.41492737603716 38.0 34.0 40.0 27.0 40.0 32 35.24775680273952 38.0 34.0 40.0 26.0 40.0 33 35.115560781253954 38.0 34.0 40.0 25.0 40.0 34 34.83319426232765 38.0 33.0 40.0 25.0 40.0 35 34.759939964672355 38.0 33.0 40.0 24.0 40.0 36 34.03301491491383 37.0 33.0 40.0 22.0 40.0 37 33.803502602614536 37.0 33.0 40.0 21.0 40.0 38 33.5162460220274 37.0 32.0 40.0 19.0 40.0 39 33.13087936222398 37.0 32.0 40.0 16.0 40.0 40 32.57650801735317 35.0 31.0 40.0 15.0 40.0 41 32.26556060064225 35.0 31.0 39.0 15.0 40.0 42 31.863321196227382 35.0 30.0 39.0 13.0 40.0 43 31.45985453534029 35.0 30.0 39.0 12.0 40.0 44 31.15119998410617 35.0 29.0 38.0 10.0 40.0 45 30.666999895245215 35.0 27.0 38.0 10.0 40.0 46 30.295582779758487 35.0 26.0 38.0 9.0 40.0 47 29.838017497661077 35.0 24.0 37.0 9.0 40.0 48 29.245819742303233 34.0 23.0 37.0 9.0 40.0 49 28.83100976386827 33.0 23.0 36.0 8.0 40.0 50 28.145815046399143 33.0 20.0 36.0 8.0 39.0 51 27.750212218742437 33.0 20.0 35.0 8.0 39.0 52 27.339720665951443 33.0 19.0 35.0 8.0 39.0 53 26.762356549160696 33.0 17.0 35.0 8.0 39.0 54 26.201780289484425 32.0 14.0 35.0 8.0 39.0 55 25.571707358481707 31.0 12.0 35.0 8.0 38.0 56 24.715382156286914 30.0 10.0 35.0 8.0 37.0 57 24.024360905514797 28.0 10.0 35.0 8.0 37.0 58 23.34791140635103 27.0 9.0 35.0 8.0 36.0 59 22.54767336013611 26.0 9.0 34.0 8.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 7.0 14 18.0 15 50.0 16 175.0 17 519.0 18 1282.0 19 2687.0 20 5234.0 21 8274.0 22 12552.0 23 18227.0 24 24736.0 25 31247.0 26 39025.0 27 44774.0 28 45431.0 29 45049.0 30 48942.0 31 56526.0 32 66102.0 33 77665.0 34 93211.0 35 104940.0 36 109527.0 37 137748.0 38 118318.0 39 15079.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.58306873719915 23.00911727839848 38.3472043115624 8.060609672839975 2 26.705425936561948 21.355255980956304 33.9336866098101 18.00563147267164 3 26.345376521202006 22.30057759620282 32.623258451724304 18.730787430870873 4 25.761820132424496 21.392732907812178 38.16496711061021 14.68047984915311 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 100.0 0.0 0.0 10 100.0 0.0 0.0 0.0 11 95.87437734117911 3.6976632458811505 0.27046601429722184 0.1574933986425225 12 96.7591037325213 1.5984135068650505 1.012057636804329 0.6304251238093174 13 91.4779274446696 5.093972265268009 1.6423021489179555 1.785798141144428 14 36.57025614350683 46.365279930067146 7.886499998193883 9.177963928232137 15 21.850854473932312 57.3903596701308 11.81715233151638 8.941633524420507 16 48.96401131351662 28.333911290759545 12.52813027160387 10.17394712411997 17 17.671590141491205 27.23082535932697 25.55122689524883 29.546357603933 18 19.00856821884358 43.10406484682322 23.750347677514206 14.137019256818995 19 42.69543088532241 28.217145829495333 20.470439283766257 8.616984001415997 20 20.571491527505355 34.58786217160279 33.877967901689445 10.962678399202419 21 36.31360692392997 25.864407575576966 22.628478129729768 15.193507370763301 22 43.720673175912175 28.06705751037614 14.940921914339485 13.271347399372194 23 17.3557002857277 26.680320910860907 28.269703832941406 27.69427497046999 24 19.644050470132242 40.399585315546695 13.537388427124986 26.418975787196075 25 18.610319429845 27.05111672211446 36.337086444369795 18.00147740367075 26 16.45869229907852 39.37009865010819 14.102522422942021 30.068686627871273 27 30.979962938480043 42.766140364185425 13.603582613595727 12.650314083738806 28 32.07275400325823 42.00910644169674 12.751456633325747 13.166682921719278 29 33.7758319877762 28.934083955540622 11.136246238761437 26.153837817921737 30 42.64838153859492 31.105849290376646 12.703684839815487 13.542084331212953 31 22.876909517152693 39.55540624988711 13.532782828884867 24.034901404075324 32 21.79938014066039 54.17800005057127 12.346434905738755 11.676184903029581 33 31.93070290459729 45.21433189927647 10.806268670734042 12.048696525392199 34 18.20620076073646 56.09663809389641 11.928409136062015 13.768752009305116 35 27.277694094358772 45.70676968757789 13.64250443401713 13.373031784046209 36 16.999353410129427 46.174915202808876 23.842730559860133 12.983000827201566 37 18.99059735512233 49.684651979323576 17.27975306768965 14.044997597864448 38 21.170490216264444 47.809089825420735 16.63424686729014 14.386173091024682 39 20.548373230456914 48.38587327560984 16.078324067953346 14.98742942597991 40 22.537540140949368 47.38555539902542 15.854004341905165 14.22290011812005 41 28.940315059041964 43.83707741378501 12.846638996954887 14.375968530218142 42 18.333712617894285 45.59316493098827 11.963176887482526 24.10994556363492 43 17.8945552798217 45.1028041771873 14.063600602520617 22.939039940470384 44 17.795941293974433 46.70636511737954 22.646719910994555 12.85097367765147 45 19.097429173123533 54.511680158360335 13.961825911998757 12.429064756517374 46 28.914939115797385 45.46583368552614 13.221227653817952 12.397999544858527 47 30.183104137091497 45.50782590477429 12.523795590907286 11.785274367226924 48 27.8529423451345 46.22097118521007 12.752359691804202 13.173726777851227 49 25.743849268703244 48.40601147967938 12.983994191527866 12.866145060089512 50 19.54679107200266 53.27548340720352 14.303091711006838 12.874633809786987 51 19.252394008026382 53.49384294729389 13.938617309102469 13.315145735577252 52 23.39174315571979 48.647218399274664 12.957263660565605 15.00377478443994 53 18.59668324682033 48.64459952968714 14.113630042227015 18.64508718126551 54 18.98030248846794 50.66808266236088 14.708203744441676 15.643411104729498 55 23.07531146486922 45.49870501414189 16.344636013249676 15.081347507739212 56 20.797165841271216 44.45242146100413 18.50935749195375 16.241055205770905 57 25.361945838164697 41.96557902303522 16.654475377207525 16.01799976159256 58 25.826027590242635 40.843799781098625 16.65041161405448 16.67976101460426 59 22.206478902747826 40.65641514681925 19.059229799484896 18.07787615094803 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 3.0 9 93.0 10 180.0 11 624.5 12 1069.0 13 1947.0 14 3393.0 15 3961.0 16 3409.0 17 2857.0 18 2540.0 19 2254.0 20 2285.0 21 2516.0 22 2747.0 23 3461.5 24 4176.0 25 5364.0 26 9044.0 27 11536.0 28 16424.5 29 21313.0 30 28284.5 31 41848.5 32 48441.0 33 52127.5 34 55814.0 35 55856.5 36 53472.5 37 51046.0 38 49190.0 39 47334.0 40 44205.5 41 41077.0 42 41422.0 43 43139.5 44 44512.0 45 44942.0 46 45372.0 47 45872.5 48 48711.5 49 51050.0 50 52743.5 51 54437.0 52 59655.5 53 69017.0 54 73160.0 55 74903.0 56 76646.0 57 71411.0 58 58039.0 59 49902.0 60 40966.5 61 32031.0 62 27652.5 63 23274.0 64 18491.0 65 12039.0 66 10370.0 67 7773.0 68 5176.0 69 4924.5 70 3583.0 71 2493.0 72 1964.0 73 1435.0 74 1324.0 75 842.5 76 472.0 77 919.0 78 1366.0 79 780.0 80 194.0 81 115.5 82 24.5 83 12.0 84 15.5 85 19.0 86 11.0 87 2.0 88 1.0 89 1.5 90 2.0 91 2.0 92 1.0 93 0.0 94 0.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1107348.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.30897648984956 #Duplication Level Percentage of deduplicated Percentage of total 1 87.42033139103867 53.59651041988048 2 5.9337000507681 7.275781538207212 3 2.1387138655354403 3.933670743018828 4 1.1682227144381911 2.864901557375972 5 0.687140343533343 2.106393558345644 6 0.4712647731415314 1.7335656538217064 7 0.33117127791017925 1.4212640464056032 8 0.24466163024939275 1.1999963309542627 9 0.1968608795828211 1.086240513430286 >10 1.314461478569707 14.310548143663615 >50 0.045855861546340956 1.9060758745718258 >100 0.040919772254222365 5.736551305836563 >500 0.005951965717394891 2.257052936002171 >1k 7.439957146743614E-4 0.5714473784858171 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CACTGCCTAGGGGGTGGGTGGATCACAAGGTCAGAAGTTCAAGATCAGCTTGGTCAACA 1464 0.13220776124578723 No Hit GGTGGCCTAGGGGGATCACGAGGTCAAGAGGTCAAGACCATCCTGGCCAACGTGGTGAA 1241 0.1120695571762445 No Hit TTGGGCCTAGAGGGGGCCCCTCGGAGCTGGAAATGCAACTCTCGGGATCCTCGGAGGCT 1234 0.11143741624132612 No Hit GAATGCCTAGGGGGGCTTTCTGCGCTCTCGCTGGACAAGTGAGCAGGGACGGCCTCAGG 1168 0.10547723028352424 No Hit GTTGGCCTAGGGAAGCAGTGGGGGAAAGGTTAACACTTCGGAGGCTGAGGAGGGTAGAT 1157 0.10448386595722392 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.6302445121136264 0.0 0.0 0.0 0.0 10 0.6302445121136264 0.0 0.0 0.0 0.0 11 0.6397266261374022 0.0 0.0 0.0 0.0 12 0.6883111722782721 0.0 0.0 0.0 0.0 13 0.8004710353023621 0.0 0.0 0.0 0.0 14 1.4345986988733443 0.0 0.0 0.0 0.0 15 1.8373627802641987 0.0 0.0 0.0 0.0 16 2.081278875294849 0.0 0.0 0.0 0.0 17 2.3480423498304055 0.0 0.0 0.0 0.0 18 2.993097020990691 0.0 0.0 0.0 0.0 19 3.217055523647489 0.0 0.0 0.0 0.0 20 3.360912739265344 0.0 0.0 0.0 0.0 21 3.519218890538476 0.0 0.0 0.0 0.0 22 3.672558220180106 0.0 0.0 0.0 0.0 23 3.808649132883249 0.0 0.0 0.0 0.0 24 4.01635258292786 0.0 0.0 0.0 0.0 25 4.197957642945126 0.0 0.0 0.0 0.0 26 4.473661396417387 0.0 0.0 0.0 0.0 27 4.6955428645737385 0.0 0.0 0.0 0.0 28 4.9699823361761615 0.0 0.0 0.0 0.0 29 5.147794550583917 0.0 0.0 0.0 0.0 30 5.409952426879355 0.0 0.0 0.0 0.0 31 5.6904423902874255 0.0 0.0 0.0 0.0 32 6.283119669697331 0.0 0.0 0.0 0.0 33 6.506536337267056 0.0 0.0 0.0 0.0 34 6.812582855615398 0.0 0.0 0.0 0.0 35 6.994368527328356 0.0 0.0 0.0 0.0 36 7.203787788482031 0.0 0.0 0.0 0.0 37 7.404266770699003 0.0 0.0 0.0 0.0 38 7.598424343566792 0.0 0.0 0.0 0.0 39 7.823466516397736 0.0 0.0 0.0 0.0 40 8.086617757019473 0.0 0.0 0.0 0.0 41 8.358709276577914 0.0 0.0 0.0 0.0 42 8.651932364532197 0.0 0.0 0.0 0.0 43 8.95436664896672 0.0 0.0 0.0 0.0 44 9.279558007058306 0.0 0.0 0.0 0.0 45 9.645477302528203 0.0 0.0 0.0 0.0 46 9.936803967677731 0.0 0.0 0.0 0.0 47 10.189208812405855 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACGT 15 0.006696201 53.000004 52 CTCGTCG 15 0.006696201 53.000004 42 CAAGTAA 15 0.006696201 53.000004 26 CTATATT 30 7.0102396E-7 53.000004 48 CTCCCGA 15 0.006696201 53.000004 18 ACCGACT 30 7.0102396E-7 53.000004 46 TAAACAC 75 0.0 53.000004 41 CAACATA 15 0.006696201 53.000004 26 TACATGA 15 0.006696201 53.000004 43 CTGCGAC 30 7.0102396E-7 53.000004 48 CTAACTA 15 0.006696201 53.000004 28 ACGATGC 15 0.006696201 53.000004 31 CCACTAT 90 0.0 53.000004 17 CACTCAC 60 0.0 53.000004 48 TCTAATA 15 0.006696201 53.000004 53 CGTACTA 15 0.006696201 53.000004 49 CGAGCTA 45 7.6397555E-11 53.000004 21 TACTCGA 15 0.006696201 53.000004 16 CCCCACG 15 0.006696201 53.000004 28 TCCCGGA 30 7.0102396E-7 53.000004 32 >>END_MODULE