##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527948_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4099716 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79449381371783 33.0 31.0 34.0 30.0 34.0 2 32.32606039052461 34.0 31.0 34.0 30.0 34.0 3 32.44608138710096 34.0 31.0 34.0 30.0 34.0 4 35.99218262923578 37.0 35.0 37.0 35.0 37.0 5 35.97590833121124 37.0 35.0 37.0 35.0 37.0 6 35.82060074405154 37.0 35.0 37.0 33.0 37.0 7 35.58736166114921 37.0 35.0 37.0 33.0 37.0 8 35.88484738942893 37.0 35.0 37.0 35.0 37.0 9 37.448355934898906 39.0 37.0 39.0 34.0 39.0 10 37.82793710588734 39.0 38.0 39.0 35.0 39.0 11 38.105228264591986 39.0 39.0 39.0 37.0 39.0 12 38.11255657708973 39.0 39.0 39.0 37.0 39.0 13 38.12889770901204 39.0 39.0 39.0 37.0 39.0 14 38.78879073574853 40.0 39.0 40.0 36.0 40.0 15 38.15041700449495 40.0 38.0 40.0 34.0 40.0 16 37.52278304155703 40.0 36.0 40.0 33.0 40.0 17 37.47473166433968 40.0 37.0 40.0 33.0 40.0 18 37.539907886302366 40.0 37.0 40.0 33.0 40.0 19 37.668055543359586 40.0 37.0 40.0 33.0 40.0 20 37.70814954011448 40.0 37.0 40.0 33.0 40.0 21 37.55308196958033 40.0 37.0 40.0 33.0 40.0 22 37.590700429005324 40.0 37.0 40.0 33.0 40.0 23 37.53846705479111 40.0 37.0 40.0 33.0 40.0 24 37.49530699199652 40.0 37.0 40.0 33.0 40.0 25 37.60999688758929 40.0 37.0 40.0 33.0 40.0 26 37.6008825977214 40.0 37.0 40.0 33.0 40.0 27 37.560708839343995 40.0 37.0 40.0 33.0 40.0 28 37.51390706087934 40.0 37.0 40.0 33.0 40.0 29 37.51041120897155 40.0 37.0 40.0 33.0 40.0 30 37.45773560900316 40.0 36.0 40.0 33.0 40.0 31 37.410771868100134 40.0 36.0 40.0 33.0 40.0 32 37.31673608610938 40.0 36.0 40.0 33.0 40.0 33 37.20957939525567 40.0 35.0 40.0 33.0 40.0 34 37.08822025720806 40.0 35.0 40.0 32.0 40.0 35 36.97847509437239 39.0 35.0 40.0 32.0 40.0 36 36.85640273618953 39.0 35.0 40.0 32.0 40.0 37 36.69713780174041 39.0 35.0 40.0 32.0 40.0 38 36.49669733220545 39.0 35.0 40.0 31.0 40.0 39 36.34141194170523 39.0 35.0 40.0 31.0 40.0 40 36.1563518058324 38.0 35.0 40.0 31.0 40.0 41 35.94542378057407 38.0 35.0 40.0 30.0 40.0 42 35.763729487603534 38.0 35.0 40.0 30.0 40.0 43 35.50694584698062 37.0 35.0 40.0 30.0 40.0 44 35.283560617369595 37.0 34.0 40.0 29.0 40.0 45 35.08173346641572 36.0 34.0 40.0 28.0 40.0 46 34.88410099626413 36.0 34.0 40.0 28.0 40.0 47 34.690877855929536 36.0 34.0 39.0 28.0 40.0 48 34.48314517395839 35.0 34.0 39.0 27.0 40.0 49 34.31089397411918 35.0 34.0 39.0 27.0 40.0 50 34.118417226949376 35.0 33.0 39.0 27.0 40.0 51 33.91477677965986 35.0 33.0 38.0 26.0 40.0 52 33.23081696390677 35.0 33.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 6.0 14 11.0 15 28.0 16 62.0 17 223.0 18 517.0 19 1144.0 20 2268.0 21 3882.0 22 6402.0 23 9663.0 24 14452.0 25 20490.0 26 28118.0 27 37639.0 28 50411.0 29 64473.0 30 81818.0 31 100483.0 32 121653.0 33 152145.0 34 223818.0 35 370996.0 36 390617.0 37 769281.0 38 1191425.0 39 457685.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.12372466775747 20.92618122816312 34.48053474923629 15.469559354843115 2 28.867926461247563 20.648479065379163 32.59691646933592 17.886678004037353 3 20.89700847570905 21.58337309218492 35.49658073876337 22.023037693342662 4 22.61432255307441 21.323745352117072 35.674739420974525 20.387192673833994 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.46788997091505 0.41244320338286844 0.08517663174717469 0.034490193954898336 12 99.44052222153925 0.402954741255248 0.08107878692085013 0.07544425028465386 13 98.14170054706229 0.986897629006497 0.27453121143025516 0.5968706125009634 14 68.03639569179913 20.129857775514207 4.35371620863494 7.4800303240517145 15 35.48392132528204 27.00450470227694 15.569395538617798 21.94217843382322 16 28.881707903669422 18.84008550836204 27.76111808720409 24.517088500764444 17 23.358447268054665 17.66556512695026 30.285951514690286 28.690036090304794 18 24.231873622465557 18.671659207613406 30.30031836351591 26.796148806405128 19 25.17623171946545 17.668687294436978 28.167097428212102 28.98798355788547 20 28.365574591020454 17.872433114879176 24.692076231621897 29.069916062478473 21 32.11690761018568 18.90855366566855 19.455250070980526 29.519288653165244 22 31.112130693930993 20.12263776320116 20.938523546509074 27.826707996358774 23 30.234972373696127 18.761763009925566 19.98843334513903 31.014831271239274 24 30.22736209044724 22.412552479244905 20.291161631683753 27.068923798624102 25 32.91730451572743 19.229161239461465 21.529344959504513 26.32418928530659 26 32.33284939737289 19.876718289754706 19.57384365160904 28.216588661263366 27 31.984971641938127 21.804632320872958 18.43878941858412 27.7716066186048 28 31.89533128636228 21.298011862285097 18.914090634570783 27.892566216781844 29 30.328832533765755 20.308114025459325 19.722414918496796 29.640638522278127 30 31.50498717472137 19.2623342690079 19.84608202129123 29.386596534979496 31 30.6574406617434 20.05951143932897 19.470690164879713 29.812357734047918 32 32.10944367853773 21.41850801372583 18.601971453632398 27.870076854104042 33 32.6270648991296 20.618062324317098 18.916798139188177 27.838074637365125 34 31.214893909724477 21.657256258726214 18.97402161515578 28.153828216393528 35 32.76546472975201 22.90407433100244 18.02739506834132 26.30306587090423 36 33.782193693416815 21.5533466220587 18.282900571649353 26.381559112875134 37 33.366457579012796 22.03145291039672 18.690733699602607 25.911355810987885 38 31.15557272747673 23.50031075323266 20.551008899153015 24.79310762013759 39 33.06016807017852 23.01142323029205 20.507664433341237 23.420744266188194 40 34.419237820375855 22.404649492794135 18.645315919444176 24.530796767385837 41 33.82046463706266 22.737062762396224 18.58938521595154 24.853087384589568 42 34.28613103932077 22.964419974456767 18.339392289612256 24.410056696610205 43 33.38828835948636 23.113259552612913 18.417519652580815 25.08093243531991 44 31.444909842535434 22.899269120104904 18.814327626596576 26.841493410763086 45 29.73374253240956 22.4108450439006 20.611622853875733 27.243789569814105 46 29.869337290680626 21.288108737288145 21.157075270579718 27.685478701451515 47 31.132937013197985 18.932994383025555 22.466190340989474 27.467878262786982 48 30.542042424402084 19.652385677446926 21.916810822993593 27.888761075157404 49 29.412037321609596 19.764320260232658 21.74392079841628 29.079721619741466 50 30.6471716577441 20.341067527604352 21.57115273350642 27.440608081145136 51 30.080620218571237 21.605057521057557 21.16946637279265 27.144855887578558 52 31.265043724979975 20.830125794079397 21.72704158044118 26.17778890049945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 4.0 8 6.0 9 20.5 10 35.0 11 197.0 12 359.0 13 528.0 14 1000.0 15 1303.0 16 1480.0 17 1657.0 18 2201.0 19 2745.0 20 3600.5 21 4456.0 22 6164.0 23 7872.0 24 10515.0 25 13158.0 26 15954.0 27 18750.0 28 22007.0 29 25264.0 30 26091.0 31 26918.0 32 26497.5 33 26077.0 34 26923.5 35 27770.0 36 28225.5 37 28681.0 38 30605.5 39 33461.5 40 34393.0 41 38278.5 42 42164.0 43 48308.0 44 54452.0 45 65098.5 46 75745.0 47 87457.5 48 99170.0 49 115942.5 50 132715.0 51 149028.5 52 165342.0 53 197774.0 54 230206.0 55 258751.0 56 287296.0 57 324464.5 58 361633.0 59 390083.0 60 418533.0 61 426940.0 62 435347.0 63 414670.5 64 354529.5 65 315065.0 66 288107.0 67 261149.0 68 231469.5 69 201790.0 70 175752.5 71 149715.0 72 127594.5 73 105474.0 74 84967.5 75 64461.0 76 47829.5 77 31198.0 78 23556.0 79 15914.0 80 9998.0 81 4082.0 82 2709.5 83 1337.0 84 755.0 85 173.0 86 121.0 87 69.0 88 41.0 89 8.5 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 4099716.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.26839389411703 #Duplication Level Percentage of deduplicated Percentage of total 1 76.33884800274488 7.075385127125687 2 7.861182183958126 1.4572106590867817 3 3.643479770452887 1.0130761697341337 4 2.169769505494189 0.8044111374545467 5 1.3909055312790368 0.6445730166700114 6 0.9423324245912458 0.5240344854186 7 0.6657904820147801 0.43195659067869163 8 0.49802661386678765 0.3692725461656572 9 0.36221063708590984 0.3021399771436158 >10 2.5178140056553664 4.6777765757323095 >50 0.5925268183834441 4.078149816078464 >100 2.737658502220353 60.72248310797397 >500 0.25775537753268757 15.42325905578664 >1k 0.021700144720411072 2.4762717349509207 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.004585683496125098 0.0 0.0 0.0 0.0 12 0.008122513852179028 0.0 0.0 0.0 0.0 13 0.014244889158175835 0.0 0.0 0.0 0.0 14 0.04073452892834528 0.0 0.0 0.0 0.0 15 0.0714195812587994 0.0 0.0 0.0 0.0 16 0.09322596979888363 0.0 0.0 0.0 0.0 17 0.10520240914248695 0.0 0.0 0.0 0.0 18 0.11981317730301319 0.0 0.0 0.0 0.0 19 0.13688753074603216 0.0 0.0 0.0 0.0 20 0.1721094827056313 0.0 0.0 0.0 0.0 21 0.21708820806124132 0.0 0.0 0.0 0.0 22 0.24313879302859026 0.0 0.0 0.0 0.0 23 0.2649451815686745 0.0 0.0 0.0 0.0 24 0.2882638699851404 0.0 0.0 0.0 0.0 25 0.3133143856793983 0.0 0.0 0.0 0.0 26 0.34541417015227394 0.0 0.0 0.0 0.0 27 0.3766602369529987 0.0 0.0 0.0 0.0 28 0.41097968737346685 0.0 0.0 0.0 7.317580047008134E-5 29 0.45110441796456147 0.0 0.0 0.0 7.317580047008134E-5 30 0.4978393625314534 0.0 0.0 0.0 7.317580047008134E-5 31 0.5385738914597987 0.0 0.0 0.0 7.317580047008134E-5 32 0.5745763852910787 0.0 0.0 0.0 7.317580047008134E-5 33 0.6063102907616039 0.0 0.0 0.0 7.317580047008134E-5 34 0.6380929800991093 0.0 0.0 0.0 7.317580047008134E-5 35 0.6686316808286232 0.0 0.0 0.0 7.317580047008134E-5 36 0.6970970672114849 0.0 0.0 0.0 7.317580047008134E-5 37 0.7253673181264263 0.0 0.0 0.0 7.317580047008134E-5 38 0.7531253384380772 0.0 0.0 0.0 7.317580047008134E-5 39 0.7810784942176483 0.0 0.0 0.0 7.317580047008134E-5 40 0.812324561018373 0.0 0.0 0.0 7.317580047008134E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAA 35 1.0204349E-7 46.000004 34 CTATACG 75 0.0 46.000004 31 GCGTTAG 35 1.0204349E-7 46.000004 44 CGAATTA 35 1.0204349E-7 46.000004 44 ATACGTC 75 0.0 46.000004 33 CGATACC 35 1.0204349E-7 46.000004 34 ATACCGT 75 0.0 46.000004 36 ACGAATT 35 1.0204349E-7 46.000004 43 AGCGTTA 20 6.3133606E-4 46.0 27 TAATAGC 55 1.8189894E-12 46.0 16 ACTATAC 55 1.8189894E-12 46.0 42 CGAACTT 55 1.8189894E-12 46.0 43 CGTATTA 20 6.3133606E-4 46.0 41 CTACTAT 30 1.8625815E-6 46.0 22 CGTATAA 25 3.4187025E-5 46.0 34 CCGATTA 20 6.3133606E-4 46.0 16 CTATATA 60 0.0 46.0 38 TAGGTCG 20 6.3133606E-4 46.0 25 TTAGACG 60 0.0 46.0 44 TAGCGAT 40 5.6170393E-9 46.0 42 >>END_MODULE