##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527946_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4065015 Sequences flagged as poor quality 0 Sequence length 59 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.353706689889215 31.0 31.0 34.0 30.0 34.0 2 31.875260976896765 31.0 31.0 34.0 30.0 34.0 3 32.101098765933216 33.0 31.0 34.0 30.0 34.0 4 35.775675366511564 37.0 35.0 37.0 35.0 37.0 5 35.65529130888816 37.0 35.0 37.0 33.0 37.0 6 35.510849775462084 37.0 35.0 37.0 32.0 37.0 7 35.15220534241571 37.0 35.0 37.0 32.0 37.0 8 35.58444630585619 37.0 35.0 37.0 33.0 37.0 9 37.04670979073878 39.0 37.0 39.0 33.0 39.0 10 37.47520292053043 39.0 37.0 39.0 35.0 39.0 11 37.78077965271961 39.0 37.0 39.0 35.0 39.0 12 37.84725148615688 39.0 37.0 39.0 35.0 39.0 13 37.88166218328838 39.0 38.0 39.0 35.0 39.0 14 38.335806878941405 40.0 38.0 40.0 35.0 40.0 15 37.6283413468339 40.0 37.0 40.0 33.0 40.0 16 37.02259647258374 39.0 36.0 40.0 32.0 40.0 17 36.90268596794846 39.0 36.0 40.0 31.0 40.0 18 36.94629761513795 39.0 36.0 40.0 31.0 40.0 19 37.09293225240251 39.0 36.0 40.0 32.0 40.0 20 37.22002551036097 39.0 36.0 40.0 32.0 40.0 21 37.21472048688627 40.0 36.0 40.0 32.0 40.0 22 37.16270198264951 39.0 36.0 40.0 32.0 40.0 23 37.10248104865542 39.0 36.0 40.0 32.0 40.0 24 37.04646477319272 39.0 36.0 40.0 31.0 40.0 25 36.97357205323966 39.0 36.0 40.0 31.0 40.0 26 36.82981145211026 39.0 35.0 40.0 31.0 40.0 27 36.69083312115699 39.0 35.0 40.0 31.0 40.0 28 36.656762398170734 39.0 35.0 40.0 31.0 40.0 29 36.61438494076898 39.0 35.0 40.0 30.0 40.0 30 36.546607085090706 39.0 35.0 40.0 30.0 40.0 31 36.53320393651684 39.0 35.0 40.0 30.0 40.0 32 36.370796417725394 39.0 35.0 40.0 30.0 40.0 33 36.17935136770713 39.0 35.0 40.0 30.0 40.0 34 36.06499238010192 38.0 35.0 40.0 30.0 40.0 35 35.916430320675325 38.0 35.0 40.0 29.0 40.0 36 35.683968447840904 38.0 35.0 40.0 29.0 40.0 37 35.508694063859544 38.0 34.0 40.0 28.0 40.0 38 35.29052168319182 38.0 34.0 40.0 27.0 40.0 39 35.1059420444943 37.0 34.0 40.0 27.0 40.0 40 34.86746346569447 37.0 33.0 40.0 26.0 40.0 41 34.667594338520274 37.0 33.0 40.0 26.0 40.0 42 34.5211370683749 37.0 33.0 40.0 26.0 40.0 43 34.23067098153389 36.0 33.0 40.0 25.0 40.0 44 33.99430654007427 36.0 33.0 39.0 24.0 40.0 45 33.757427955370396 35.0 33.0 39.0 23.0 40.0 46 33.50096863111206 35.0 33.0 39.0 23.0 40.0 47 33.32195699154862 35.0 32.0 39.0 23.0 40.0 48 33.0635112047557 35.0 32.0 38.0 23.0 40.0 49 32.940163074429 35.0 32.0 38.0 22.0 40.0 50 32.698965194470375 35.0 32.0 38.0 22.0 40.0 51 32.46983811867853 35.0 31.0 37.0 21.0 40.0 52 32.2619392548367 35.0 31.0 37.0 20.0 40.0 53 31.996218956141615 35.0 31.0 37.0 20.0 39.0 54 31.80358965465072 35.0 31.0 36.0 20.0 39.0 55 31.610402913642385 34.0 30.0 36.0 20.0 39.0 56 31.372579190974694 34.0 30.0 36.0 19.0 39.0 57 31.19023595238886 34.0 30.0 35.0 18.0 39.0 58 31.00046789495242 34.0 30.0 35.0 18.0 38.0 59 30.45255700163468 34.0 29.0 35.0 17.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 5.0 13 8.0 14 28.0 15 96.0 16 372.0 17 1055.0 18 2431.0 19 4893.0 20 8497.0 21 12858.0 22 18967.0 23 26340.0 24 35528.0 25 46178.0 26 58974.0 27 73097.0 28 88429.0 29 103469.0 30 121361.0 31 142852.0 32 170767.0 33 215555.0 34 303522.0 35 406848.0 36 529289.0 37 783130.0 38 782450.0 39 128015.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.842771797890045 21.38528394114167 34.06285093658941 15.709093324378875 2 27.903734672565783 21.369835043659123 32.581158987113206 18.145271296661882 3 21.05419045194175 21.83020234857682 35.52872498625466 21.586882213226765 4 22.342771182886164 21.552195994356723 35.686879384208915 20.4181534385482 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.4450696983898 0.4190390441363685 0.09589140507476603 0.03999985239906864 12 99.43026040494316 0.405189156743579 0.08462453398080942 0.07992590433245635 13 98.09784219738427 1.017757622050595 0.28120437439960244 0.6031958061655369 14 67.71869230494845 20.377390981337093 4.418212478920742 7.485704234793722 15 35.43042276596765 27.115078296144045 15.569143041292591 21.88535589659571 16 28.892833113776952 18.992648243610414 27.70016838806253 24.414350254550108 17 23.257035951896857 17.816933024847387 30.228547742136254 28.697483281119503 18 24.189234234068017 18.924358212700323 30.12357887978273 26.76282867344893 19 25.18765613411021 17.772775746214958 28.09052365120424 28.949044468470596 20 28.27123639150163 18.07100342803163 24.67550550243972 28.98225467802702 21 31.820595987960683 19.156583678043006 19.47466368512785 29.548156648868456 22 31.02465796559176 20.34974040686197 20.942259745658994 27.683341881887273 23 30.15553448142258 18.985587999060275 19.972816828474187 30.88606069104296 24 30.210343627268287 22.641982870911914 20.115842130963845 27.03183137085595 25 32.81820608288039 19.435451037696048 21.56917010146334 26.177172777960227 26 32.243202054604964 20.034883020111856 19.564552652327237 28.157362272955943 27 31.876167738618435 21.95846755793029 18.542957406061234 27.622407297390044 28 31.8919118379637 21.509588525503595 18.865219439534663 27.733280196998045 29 30.26030654253428 20.444721606193337 19.734219922927714 29.56075192834467 30 31.487017883082842 19.510383110517427 19.805412772154593 29.197186234245137 31 30.651842613126888 20.26026964230144 19.40511904630118 29.682768698270483 32 31.997692505439705 21.611211766746248 18.620078892697816 27.77101683511623 33 32.54268434433821 20.845285933754244 18.90204587190945 27.709983849998093 34 31.1748665134077 21.950841509809926 18.889327591657104 27.98496438512527 35 32.63896935189661 23.131206157910857 18.076194060784523 26.153630429408008 36 33.69805523472853 21.777828618098578 18.35004298877126 26.17407315840163 37 33.30747857018978 22.224370635778712 18.674519036215116 25.793631757816392 38 31.059294984151347 23.72589031036786 20.500244156540628 24.714570548940166 39 32.961132984749135 23.28655613816923 20.320589222918 23.43172165416364 40 34.30641707349174 22.678095898785124 18.62937775137361 24.386109276349533 41 33.778596142941666 22.997159912079045 18.52320348141397 24.701040463565324 42 34.196626580713726 23.172583619002634 18.28763239496041 24.343157405323225 43 33.25139021627226 23.37078706966641 18.418677421854532 24.959145292206795 44 31.35621885774099 23.083727858322785 18.742513865262488 26.817539418673732 45 29.635216598216736 22.801834679576828 20.510256419718008 27.052692302488428 46 29.89838905883496 21.529317849995632 21.019184431053763 27.553108660115644 47 31.058532379339315 19.158158087977537 22.321664249701413 27.461645282981735 48 30.424094376035516 19.876605621381472 21.88046046570554 27.818839536877476 49 29.31866180075596 20.06142658760177 21.704766157074452 28.91514545456782 50 30.594745652845067 20.63581561199651 21.40946589372979 27.359972841428633 51 29.989040630846382 21.863978361703463 21.08981147671042 27.05716953073974 52 31.17479271294202 20.981841395419202 21.710497993242335 26.13286789839644 53 28.550398953017393 21.46466864205913 22.131677250883453 27.853255154040024 54 28.552760567919183 21.329884391570513 22.15827001868382 27.959085021826485 55 29.09278317546184 21.511704138853116 21.48892439511293 27.906588290572117 56 29.88097214893426 21.887545310410907 20.875347323441613 27.35613521721322 57 29.837921877287044 21.08164422517506 20.790550588374213 28.28988330916368 58 30.154255273350778 21.391409379793185 20.666393604943647 27.78794174191239 59 29.534651163648846 20.69121516156767 21.319453925754274 28.454679749029214 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.5 5 1.0 6 2.5 7 4.0 8 19.0 9 134.5 10 235.0 11 347.5 12 460.0 13 634.5 14 815.0 15 821.0 16 1037.0 17 1253.0 18 1402.5 19 1825.0 20 2098.0 21 2675.5 22 3253.0 23 4251.0 24 5249.0 25 7336.5 26 12340.5 27 15257.0 28 17781.5 29 20306.0 30 22367.0 31 26104.0 32 27780.0 33 29126.5 34 30473.0 35 32146.0 36 33426.0 37 33033.0 38 33108.0 39 33183.0 40 35626.5 41 38070.0 42 41393.5 43 51929.0 44 59141.0 45 66232.0 46 73323.0 47 76505.5 48 89336.0 49 98984.0 50 113452.5 51 127921.0 52 146615.5 53 179276.5 54 193243.0 55 222189.5 56 251136.0 57 289297.0 58 340976.0 59 354494.0 60 361803.5 61 369113.0 62 364761.0 63 360409.0 64 343848.0 65 289214.5 66 251142.0 67 227737.0 68 204332.0 69 177843.5 70 138695.5 71 126036.0 72 114736.5 73 103437.0 74 80207.5 75 42333.0 76 27688.0 77 22897.5 78 18107.0 79 12469.5 80 6832.0 81 5303.0 82 2378.5 83 983.0 84 651.0 85 319.0 86 258.5 87 122.5 88 47.0 89 29.0 90 11.0 91 9.5 92 5.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 4065015.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.592632274975836 #Duplication Level Percentage of deduplicated Percentage of total 1 82.0049055848715 11.146625263592703 2 6.69046658555865 1.818821040910238 3 2.8641677019518785 1.1679473503948343 4 1.676297180746416 0.9114116464585894 5 1.0096797089688525 0.6862102499759117 6 0.6894239120851732 0.5622651431129418 7 0.47049219825191213 0.44766592073582895 8 0.3210195346273509 0.3490800389818762 9 0.2436095504090529 0.29801655336442007 >10 1.5894462605356388 4.385556726836947 >50 0.4229253694967323 4.269439361549096 >100 1.8535783921726339 58.58446567978879 >500 0.15243181754988322 13.423266634556985 >1k 0.011556202774539883 1.949228389740858 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.004674029493126101 0.0 0.0 0.0 0.0 12 0.008831455726485634 0.0 0.0 0.0 0.0 13 0.013948288013697366 0.0 0.0 0.0 0.0 14 0.036432829891156614 0.0 0.0 0.0 0.0 15 0.06514121104104167 0.0 0.0 0.0 0.0 16 0.08440313258376661 0.0 0.0 0.0 0.0 17 0.09606360616135488 0.0 0.0 0.0 0.0 18 0.10986429324369036 0.0 0.0 0.0 0.0 19 0.1260265952278159 0.0 0.0 0.0 0.0 20 0.15881860214537954 0.0 0.0 0.0 0.0 21 0.20002386215057016 0.0 0.0 0.0 0.0 22 0.22543582250003996 0.0 0.0 0.0 0.0 23 0.24432874171436023 0.0 0.0 0.0 0.0 24 0.26585387753796724 0.0 0.0 0.0 0.0 25 0.2895684271767755 0.0 0.0 0.0 0.0 26 0.3170222004100846 0.0 0.0 0.0 0.0 27 0.3456567810942887 0.0 0.0 0.0 0.0 28 0.3781535861491286 0.0 0.0 0.0 1.476009313618769E-4 29 0.4150292188343708 0.0 0.0 0.0 1.476009313618769E-4 30 0.4558654765111568 0.0 0.0 0.0 1.476009313618769E-4 31 0.495201124719097 0.0 0.0 0.0 1.476009313618769E-4 32 0.5295183412607334 0.0 0.0 0.0 1.476009313618769E-4 33 0.5605145368467275 0.0 0.0 0.0 1.476009313618769E-4 34 0.5889277161338888 0.0 0.0 0.0 1.476009313618769E-4 35 0.6160862875044741 0.0 0.0 0.0 1.476009313618769E-4 36 0.642654455149612 0.0 0.0 0.0 1.476009313618769E-4 37 0.6699360272963323 0.0 0.0 0.0 1.476009313618769E-4 38 0.6962335932339733 0.0 0.0 0.0 1.476009313618769E-4 39 0.7237857670881903 0.0 0.0 0.0 1.476009313618769E-4 40 0.7531829525844308 0.0 0.0 0.0 1.476009313618769E-4 41 0.780513725041605 0.0 0.0 0.0 1.476009313618769E-4 42 0.8055566830626701 0.0 0.0 0.0 1.476009313618769E-4 43 0.831977249776446 0.0 0.0 0.0 1.476009313618769E-4 44 0.8571432085736461 0.0 0.0 0.0 1.476009313618769E-4 45 0.8823583676813 0.0 0.0 0.0 1.476009313618769E-4 46 0.9070815236844144 0.0 0.0 0.0 1.476009313618769E-4 47 0.9317554793770749 0.0 0.0 0.0 1.7220108658885637E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATTAT 25 1.4794021E-5 53.000004 36 CTACGTT 25 1.4794021E-5 53.000004 17 TATAGGT 25 1.4794021E-5 53.000004 23 TACTAAC 25 1.4794021E-5 53.000004 24 ATACGTC 45 7.6397555E-11 53.000004 33 CCGTTAT 25 1.4794021E-5 53.000004 32 ACGAATT 50 3.6379788E-12 53.000004 43 CGTATAA 15 0.0066974824 53.0 34 GACGTTA 20 3.1391936E-4 53.0 50 GACGTAA 20 3.1391936E-4 53.0 29 ACTTATA 20 3.1391936E-4 53.0 44 TAACGAC 15 0.0066974824 53.0 43 TCGATAA 15 0.0066974824 53.0 28 CGCTAAT 55 0.0 53.0 15 CGAATCA 15 0.0066974824 53.0 21 ACGTAAG 265 0.0 53.0 27 TATCGAT 30 7.0149144E-7 53.0 25 CGATACC 35 3.3449396E-8 53.0 34 TAGTAAT 35 3.3449396E-8 53.0 38 TACCGAT 35 3.3449396E-8 53.0 19 >>END_MODULE