##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527937_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3343173 Sequences flagged as poor quality 0 Sequence length 59 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34885182429985 31.0 31.0 34.0 30.0 34.0 2 31.947815144475022 33.0 31.0 34.0 30.0 34.0 3 32.16468426850779 34.0 31.0 34.0 30.0 34.0 4 35.78551992373712 37.0 35.0 37.0 35.0 37.0 5 35.759507210664836 37.0 35.0 37.0 35.0 37.0 6 35.73474660150701 37.0 35.0 37.0 33.0 37.0 7 35.863964862123495 37.0 35.0 37.0 35.0 37.0 8 35.881067776031934 37.0 35.0 37.0 35.0 37.0 9 37.371268552360284 39.0 37.0 39.0 34.0 39.0 10 37.34421610846941 39.0 37.0 39.0 34.0 39.0 11 37.78156021240899 39.0 37.0 39.0 35.0 39.0 12 37.78848267798286 39.0 37.0 39.0 35.0 39.0 13 37.61967567936209 39.0 37.0 39.0 35.0 39.0 14 37.77953040419984 40.0 38.0 40.0 33.0 40.0 15 36.823817672612215 39.0 35.0 40.0 31.0 40.0 16 36.770527878754706 39.0 36.0 40.0 31.0 40.0 17 36.69341490853151 39.0 35.0 40.0 31.0 40.0 18 36.80276820852525 39.0 35.0 40.0 31.0 40.0 19 36.91332814664392 39.0 35.0 40.0 31.0 40.0 20 36.96465902302992 39.0 35.0 40.0 32.0 40.0 21 36.97026088688799 39.0 35.0 40.0 32.0 40.0 22 36.94620619393612 39.0 35.0 40.0 31.0 40.0 23 36.885247936615905 39.0 35.0 40.0 31.0 40.0 24 36.91862909876336 39.0 35.0 40.0 31.0 40.0 25 36.87484524432328 39.0 35.0 40.0 31.0 40.0 26 36.72474472604319 39.0 35.0 40.0 31.0 40.0 27 36.63337643609828 39.0 35.0 40.0 31.0 40.0 28 36.578511791044015 39.0 35.0 40.0 31.0 40.0 29 36.54180654127082 39.0 35.0 40.0 30.0 40.0 30 36.48669452642744 39.0 35.0 40.0 30.0 40.0 31 36.47517971699341 39.0 35.0 40.0 30.0 40.0 32 36.365414831957544 39.0 35.0 40.0 30.0 40.0 33 36.23003655509302 38.0 35.0 40.0 30.0 40.0 34 36.16144782217373 38.0 35.0 40.0 30.0 40.0 35 36.03500746147447 38.0 35.0 40.0 30.0 40.0 36 35.80536484351842 38.0 35.0 40.0 29.0 40.0 37 35.70763044568738 38.0 35.0 40.0 29.0 40.0 38 35.53507610883433 38.0 34.0 40.0 28.0 40.0 39 35.373715927952276 38.0 34.0 40.0 28.0 40.0 40 35.17315167357477 38.0 34.0 40.0 27.0 40.0 41 35.031206282175646 37.0 34.0 40.0 27.0 40.0 42 34.86197872500167 37.0 34.0 40.0 26.0 40.0 43 34.619069668246304 37.0 33.0 40.0 26.0 40.0 44 34.43268086934179 36.0 33.0 40.0 25.0 40.0 45 34.18241413172456 36.0 33.0 40.0 24.0 40.0 46 33.92961447104293 36.0 33.0 39.0 23.0 40.0 47 33.75447965151669 35.0 33.0 39.0 23.0 40.0 48 33.53526485168431 35.0 33.0 39.0 23.0 40.0 49 33.38728208202208 35.0 33.0 39.0 23.0 40.0 50 33.11261068452036 35.0 32.0 39.0 22.0 40.0 51 32.89695328360214 35.0 32.0 38.0 21.0 40.0 52 32.703805037908594 35.0 32.0 38.0 20.0 40.0 53 32.44995517731209 35.0 31.0 38.0 20.0 40.0 54 32.19074872882737 35.0 31.0 38.0 19.0 40.0 55 31.945795805362152 35.0 31.0 38.0 18.0 40.0 56 31.61409774486693 35.0 31.0 37.0 17.0 40.0 57 31.321599570228642 35.0 30.0 37.0 15.0 39.0 58 31.036643332546657 34.0 30.0 36.0 13.0 39.0 59 30.450072730307404 34.0 29.0 36.0 10.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 5.0 14 23.0 15 96.0 16 328.0 17 897.0 18 2013.0 19 3833.0 20 6580.0 21 10453.0 22 15552.0 23 21564.0 24 28946.0 25 38175.0 26 47993.0 27 60093.0 28 69597.0 29 80995.0 30 95602.0 31 116204.0 32 142330.0 33 181962.0 34 269434.0 35 344104.0 36 353424.0 37 541148.0 38 745362.0 39 166452.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.895603069299735 21.13985725536788 35.65597712113612 14.30856255419627 2 27.278965222559528 21.947174136665975 33.26567305969508 17.50818758107941 3 26.642952668019277 22.112376475880847 32.298328563912186 18.94634229218769 4 20.00156737327084 23.965735545243994 34.16751092450197 21.865186156983203 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 100.0 0.0 0.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 100.0 0.0 0.0 0.0 11 99.15209293685969 0.7251195196898276 0.08411171064135778 0.03867583280913073 12 98.794109667672 0.9076108236097863 0.13633754520032318 0.16194196351789153 13 93.62432036870362 3.2442832004206776 1.5551393840522163 1.576257046823482 14 40.95567294902178 35.15734902142366 9.778435037612471 14.108542991942086 15 28.765846098900656 31.38712833586536 20.797428072074045 19.049597493159943 16 32.357733207345234 20.71840135105183 24.199944184761005 22.723921256841926 17 22.553663839711554 21.31956677084913 27.331968761413183 28.79480062802613 18 22.555189336597298 25.594846572402925 28.708086599167913 23.14187749183186 19 27.69689154584582 23.563841895109825 26.743844844403803 21.995421714640553 20 26.48008344168848 24.67278839593404 26.755630055638758 22.09149810673872 21 30.133528836228336 23.64897060367501 22.398362274402192 23.819138285694457 22 28.044226248536948 26.34374589648816 23.785637177615396 21.826390677359502 23 24.245918473258786 25.406043899014495 25.757955092362856 24.590082535363862 24 25.070793524594748 30.091802009647722 21.61898292430574 23.21842154145179 25 26.649054655562242 23.803105612542335 25.547436522130322 24.000403209765096 26 26.786528845500968 26.095747961592174 21.548989537783417 25.568733655123445 27 28.15540805097433 27.860987152025935 20.404657491550694 23.578947305449045 28 28.191481565566605 27.903072919050253 20.345910905597766 23.559534609785374 29 29.222508078403358 26.242614426474493 19.271422687369157 25.263454807752993 30 29.737258586378868 26.308330439376004 19.689917333024646 24.26449364122048 31 26.274231097224103 27.082086389187754 19.449337500631884 27.194345012956255 32 26.167057463074748 30.24758216221536 19.53446620919707 24.050894165512823 33 28.160672510815328 30.335971246477524 19.60110948491149 21.902246757795663 34 26.39369844157033 30.501592349543383 20.30140229057844 22.803306918307847 35 27.334271962593622 30.380449949793203 19.321315409044043 22.963962678569132 36 26.614028050597444 29.980889412543117 22.04190450210025 21.363178034759194 37 26.149409557925956 30.56512480807903 21.281967759371113 22.003497874623896 38 25.842724860484335 31.11986726382392 22.328039859139807 20.70936801655194 39 25.90449252850511 32.373706057090075 21.042763865345883 20.679037549058933 40 25.335302719901126 33.3692572894074 19.790360833854546 21.505079156836935 41 26.295677788735432 32.786158538609875 19.934535245409077 20.983628427245613 42 25.64306423867386 32.45692041662217 20.718760291495535 21.181255053208435 43 26.429054075275193 32.532776497058336 18.747728580004683 22.290440847661788 44 25.095739885432195 31.54374601613497 19.482838608710946 23.877675489721888 45 25.38591332246342 33.05407766813144 19.535662677342753 22.024346332062386 46 27.380934220275172 29.62105161772962 19.291972027771223 23.706042134223985 47 27.56225896775309 28.980522395939428 20.825335691572047 22.631882944735434 48 27.823178758622426 29.480945197870405 19.94410699057452 22.751769052932648 49 26.876563073463444 30.183690763236005 20.17275205321412 22.766994110086436 50 25.798036775243162 31.33328726930972 19.86451194718311 23.004164008264006 51 24.689718420195426 31.784116466602235 21.00223350691095 22.523931606291388 52 25.191726542419435 30.704692817272694 21.2924966790531 22.81108396125477 53 25.108930946738322 30.974107531976358 20.45362295041268 23.46333857087264 54 23.71752822842252 31.350486498903884 21.53523015410809 23.39675511856551 55 24.595825582463128 30.24276637792899 21.28588619254822 23.875521847059662 56 24.917196926392982 30.929120329698762 21.080602170453037 23.07308057345522 57 25.12948028714039 29.571308454572947 22.160923170891845 23.13828808739482 58 25.166780181581988 28.56232686732036 22.12990473421507 24.140988216882583 59 25.473434967319967 28.589696076152805 21.82205348033141 24.114815476195815 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 18.5 5 36.0 6 131.0 7 226.0 8 633.5 9 1795.0 10 2549.0 11 3095.0 12 3641.0 13 3617.0 14 3417.0 15 3241.0 16 3444.5 17 3648.0 18 4114.5 19 5806.0 20 7031.0 21 10432.5 22 13834.0 23 19834.5 24 25835.0 25 32350.0 26 44853.5 27 50842.0 28 57372.5 29 63903.0 30 65767.5 31 68349.5 32 69067.0 33 69638.0 34 70209.0 35 73894.5 36 80627.0 37 83674.0 38 86328.0 39 88982.0 40 92767.0 41 96552.0 42 102266.5 43 113687.5 44 119394.0 45 126603.0 46 133812.0 47 141605.0 48 161559.0 49 173720.0 50 183092.0 51 192464.0 52 191279.0 53 202173.5 54 214253.0 55 220115.5 56 225978.0 57 224286.5 58 211171.0 59 199747.0 60 182736.0 61 165725.0 62 148322.5 63 130920.0 64 115527.5 65 85408.5 66 70682.0 67 63507.5 68 56333.0 69 50493.5 70 36884.5 71 29115.0 72 23480.0 73 17845.0 74 14691.0 75 8490.5 76 5444.0 77 3526.0 78 1608.0 79 1560.5 80 1513.0 81 1413.5 82 739.0 83 164.0 84 150.5 85 137.0 86 86.0 87 23.0 88 11.0 89 6.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 3343173.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.73644197488689 #Duplication Level Percentage of deduplicated Percentage of total 1 82.15745001323933 15.39338294977729 2 6.395593989855924 2.3966135137174174 3 2.7058901230567916 1.520962598432194 4 1.6216916741688692 1.215389278168888 5 1.0379495384452047 0.9723740649969604 6 0.7149307995437331 0.8037155665026388 7 0.5274522759505172 0.6917805274008226 8 0.417535479645472 0.6258503429467163 9 0.3123467287397553 0.5267039723170345 >10 2.198651335106999 8.121398904812668 >50 0.530861136842955 7.338095169385027 >100 1.311008637803102 51.61059204850926 >500 0.06274094628012873 7.42979438444193 >1k 0.005897321321369803 1.3533466785911317 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.04447870331568244 0.0 0.0 0.0 0.0 10 0.04447870331568244 0.0 0.0 0.0 0.0 11 0.056413473068848065 0.0 0.0 0.0 0.0 12 0.07142914829714167 0.0 0.0 0.0 0.0 13 0.0804026593897474 0.0 0.0 0.0 0.0 14 0.14492220414558266 0.0 0.0 0.0 0.0 15 0.19526360137510085 0.0 0.0 0.0 0.0 16 0.22463689435156362 0.0 0.0 0.0 0.0 17 0.2463228794920275 0.0 0.0 0.0 0.0 18 0.2896649380693132 0.0 0.0 0.0 0.0 19 0.3165256479398464 0.0 0.0 0.0 0.0 20 0.34622796965637137 0.0 0.0 0.0 0.0 21 0.3772464063331452 0.0 0.0 0.0 0.0 22 0.411345748485047 0.0 0.0 0.0 0.0 23 0.44634244174620935 0.0 0.0 0.0 0.0 24 0.48935547158343284 0.0 0.0 0.0 0.0 25 0.528659450169046 0.0 0.0 0.0 0.0 26 0.5743346216304092 0.0 0.0 0.0 0.0 27 0.6222830825685659 0.0 0.0 0.0 0.0 28 0.6725048329835159 0.0 0.0 0.0 0.0 29 0.7183594746667312 0.0 0.0 0.0 0.0 30 0.7733670976644045 0.0 0.0 0.0 0.0 31 0.829032778142202 0.0 0.0 0.0 0.0 32 0.8900526535719211 0.0 0.0 0.0 0.0 33 0.9429365456110108 0.0 0.0 0.0 0.0 34 0.993158296025961 0.0 0.0 0.0 0.0 35 1.0410170218531916 0.0 0.0 0.0 0.0 36 1.0905208913807332 0.0 0.0 0.0 0.0 37 1.143434695123465 0.0 0.0 0.0 0.0 38 1.199788344785029 0.0 0.0 0.0 0.0 39 1.265265064057409 0.0 0.0 0.0 0.0 40 1.343394433970363 0.0 0.0 0.0 0.0 41 1.4224510666962193 0.0 0.0 0.0 0.0 42 1.5017469930512122 0.0 0.0 0.0 0.0 43 1.582807709921084 0.0 0.0 0.0 0.0 44 1.6654537470839827 0.0 0.0 0.0 0.0 45 1.7496851045399087 0.0 0.0 0.0 2.9911703642019124E-5 46 1.8328994640720058 0.0 0.0 0.0 2.9911703642019124E-5 47 1.9099819243574891 0.0 0.0 0.0 2.9911703642019124E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGAA 20 3.139112E-4 53.000004 44 TTACGCC 60 0.0 53.0 38 TAAGGCG 60 0.0 53.0 48 GCGCTAA 30 7.0145506E-7 53.0 34 TATCTCG 115 0.0 50.69565 19 GATTGCG 275 0.0 50.109093 13 AGGGGAT 25815 0.0 48.924652 9 CGCTATA 1240 0.0 48.725803 1 TCATACA 26750 0.0 48.571774 3 CAGGGGG 139725 0.0 48.550617 8 ACCATAC 3305 0.0 48.50983 2 AGGGGGC 35450 0.0 48.492386 9 CTATACA 23910 0.0 48.27855 3 CATACAG 80605 0.0 48.209915 4 CTCATAC 4190 0.0 48.193317 2 AACCGGT 110 0.0 48.181816 15 CGGATTA 55 1.0913936E-11 48.181816 43 AGGGGGG 42620 0.0 48.038246 9 CCGTATA 635 0.0 47.992126 1 CCGATAC 1845 0.0 47.9729 2 >>END_MODULE