##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527936_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1316630 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.926894419844604 33.0 31.0 34.0 30.0 34.0 2 32.40857264379515 34.0 31.0 34.0 30.0 34.0 3 32.5549972277709 34.0 31.0 34.0 31.0 34.0 4 36.050500900025064 37.0 35.0 37.0 35.0 37.0 5 35.993557795280374 37.0 35.0 37.0 35.0 37.0 6 36.09516416912876 37.0 36.0 37.0 35.0 37.0 7 35.95914873578758 37.0 35.0 37.0 35.0 37.0 8 36.08876297820952 37.0 36.0 37.0 35.0 37.0 9 37.7355589649332 39.0 38.0 39.0 35.0 39.0 10 38.01178463197709 39.0 38.0 39.0 35.0 39.0 11 38.18544617698215 39.0 39.0 39.0 37.0 39.0 12 38.09807159186712 39.0 39.0 39.0 37.0 39.0 13 38.10750476595551 39.0 39.0 39.0 37.0 39.0 14 38.658101364848136 40.0 39.0 40.0 36.0 40.0 15 38.13009121773011 40.0 38.0 40.0 34.0 40.0 16 37.67751912078564 40.0 37.0 40.0 33.0 40.0 17 37.62325026772898 40.0 37.0 40.0 33.0 40.0 18 37.69394742638403 40.0 37.0 40.0 33.0 40.0 19 37.854780006531826 40.0 38.0 40.0 33.0 40.0 20 37.92835496684718 40.0 38.0 40.0 34.0 40.0 21 37.77036145310376 40.0 37.0 40.0 33.0 40.0 22 37.84645344553899 40.0 37.0 40.0 33.0 40.0 23 37.7718242786508 40.0 37.0 40.0 33.0 40.0 24 37.75568458868475 40.0 37.0 40.0 33.0 40.0 25 37.833892589413885 40.0 37.0 40.0 33.0 40.0 26 37.788274610179016 40.0 37.0 40.0 33.0 40.0 27 37.76397317393649 40.0 37.0 40.0 33.0 40.0 28 37.709282030638825 40.0 37.0 40.0 33.0 40.0 29 37.668213545187335 40.0 37.0 40.0 33.0 40.0 30 37.631355809908634 40.0 37.0 40.0 33.0 40.0 31 37.56601399026302 40.0 37.0 40.0 33.0 40.0 32 37.51428951185982 40.0 37.0 40.0 33.0 40.0 33 37.447005612814536 40.0 36.0 40.0 33.0 40.0 34 37.36595398859209 40.0 36.0 40.0 33.0 40.0 35 37.26165133712584 40.0 36.0 40.0 33.0 40.0 36 37.188617910878534 40.0 35.0 40.0 33.0 40.0 37 37.05363162012107 39.0 35.0 40.0 32.0 40.0 38 36.853623265458026 39.0 35.0 40.0 32.0 40.0 39 36.699289853641496 39.0 35.0 40.0 32.0 40.0 40 36.504203914539396 39.0 35.0 40.0 31.0 40.0 41 36.32898384511974 39.0 35.0 40.0 31.0 40.0 42 36.15605599143267 38.0 35.0 40.0 31.0 40.0 43 35.938568922172514 38.0 35.0 40.0 30.0 40.0 44 35.757457296279135 38.0 35.0 40.0 30.0 40.0 45 35.56420102838307 38.0 35.0 40.0 30.0 40.0 46 35.36883482831168 37.0 35.0 40.0 29.0 40.0 47 35.180854150368745 37.0 34.0 40.0 28.0 40.0 48 34.95056925635904 37.0 34.0 40.0 28.0 40.0 49 34.7477939891997 36.0 34.0 40.0 27.0 40.0 50 34.54254346323569 36.0 34.0 40.0 27.0 40.0 51 34.285278324206494 35.0 34.0 39.0 26.0 40.0 52 33.60890303274268 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 7.0 15 6.0 16 26.0 17 47.0 18 127.0 19 264.0 20 544.0 21 969.0 22 1593.0 23 2448.0 24 3745.0 25 5535.0 26 7820.0 27 10631.0 28 14246.0 29 18714.0 30 23928.0 31 30018.0 32 36820.0 33 46709.0 34 66502.0 35 112584.0 36 114143.0 37 217275.0 38 399527.0 39 202399.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.285623143935656 21.175577041385964 33.60139143115378 16.937408383524605 2 20.128813713799627 24.238776269718905 34.26505548255774 21.36735453392373 3 22.396573069123445 22.132641668502163 32.73660785490229 22.734177407472107 4 21.798531098334383 18.363321510219272 34.39599583785878 25.442151553587568 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.38889437427372 0.30532495841656354 0.25793123352802233 0.04784943378170025 12 99.4413768484692 0.20742349786956094 0.24479162710860305 0.10640802655263817 13 98.42180415150801 0.8712394522379103 0.23750028481805824 0.46945611143601473 14 63.888260179397406 17.330229449427705 10.169751562701746 8.611758808473146 15 32.032081906078396 25.692335735931888 18.91184311461838 23.363739243371334 16 30.410593712736304 15.938114732309 30.312920106635882 23.338371448318814 17 21.784707928575227 18.399322512778838 31.389988075617296 28.42598148302864 18 22.888510819288637 16.685781123018618 36.0048760851568 24.420831972535943 19 22.04218345321009 19.22134540455557 30.723665722336573 28.012805419897767 20 23.840486697097894 17.618009615457645 27.83128137745608 30.710222309988378 21 28.60963216697174 17.431093017780242 22.302393231203908 31.65688158404411 22 27.76740618093162 21.477939891996993 22.407813888488036 28.346840038583355 23 27.728215216119946 18.36446078245217 21.966991485838847 31.94033251558904 24 26.53547313975832 21.515687778647 20.61915648283876 31.329682598755916 25 31.301580550344436 17.639959593811476 23.732559640901393 27.325900214942695 26 29.628597252075373 19.02926410608903 20.565686639374768 30.77645200246083 27 29.731967219340284 21.648071212109706 20.595383668912298 28.02457789963771 28 29.923744711878054 22.886308226305037 19.981012129451706 27.208934932365203 29 29.988835132117604 23.144619217244024 19.563810637764593 27.302735012873775 30 31.12765165612207 21.77377091513941 18.51355354199737 28.58502388674115 31 28.89118431146184 21.385203132239123 20.572294418325573 29.151318137973465 32 28.89141216590842 24.362956943104745 18.57188428032173 28.173746610665106 33 30.616346277997614 23.135808845309615 19.142279911592475 27.105564965100292 34 29.383425867555808 23.967097817913917 19.51436622285684 27.135110091673436 35 29.103240849745184 25.020924633344222 20.025215892088134 25.850618624822463 36 30.957444384527165 24.504074797019666 19.77844952644251 24.760031292010666 37 30.24388020932228 24.38984376780113 19.32805723703698 26.038218785839607 38 29.791816987308508 26.223160644979988 20.13754813425184 23.847474233459668 39 30.923190266058043 23.53637696239642 20.329325626789608 25.21110714475593 40 30.6910825364757 25.664309639002603 19.58545681018965 24.059151014332045 41 30.07063487843965 26.009964834463744 19.346437495727727 24.572962791368873 42 31.48219317499981 24.80150080128814 18.370916658438592 25.345389365273462 43 30.183119023567745 25.9425958697584 17.36547093716534 26.508814169508515 44 30.022785444657952 25.46045586079612 19.899819994987205 24.616938699558723 45 27.825129307398434 25.452708809612417 20.137016473876486 26.58514540911266 46 28.991212413510247 23.943476906951837 20.47340558851006 26.59190509102785 47 29.953973401790932 22.758481881773925 21.947775760843975 25.33976895559117 48 29.570342465233207 22.258645177460636 21.73404828995238 26.436964067353774 49 28.703812004891276 21.60371554650889 22.069981695692793 27.62249075290704 50 28.501401304846464 23.79711840076559 21.00855973204317 26.692920562344774 51 28.150505457113994 24.207712113501895 21.91686350759135 25.72491892179276 52 29.20820579813615 24.425237158503148 20.076635045532914 26.289921997827786 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 12.0 8 24.0 9 22.5 10 21.0 11 79.0 12 137.0 13 233.0 14 431.5 15 534.0 16 612.0 17 690.0 18 943.5 19 1197.0 20 1933.0 21 2669.0 22 4463.0 23 6257.0 24 8595.5 25 10934.0 26 14347.5 27 17761.0 28 16888.0 29 16015.0 30 14890.5 31 13766.0 32 12728.0 33 11690.0 34 13073.5 35 14457.0 36 13785.0 37 13113.0 38 13348.0 39 17397.0 40 21211.0 41 24229.0 42 27247.0 43 28746.5 44 30246.0 45 36482.0 46 42718.0 47 44306.0 48 45894.0 49 55854.5 50 65815.0 51 72017.0 52 78219.0 53 88211.0 54 98203.0 55 105810.0 56 113417.0 57 114598.0 58 115779.0 59 118202.5 60 120626.0 61 111169.0 62 101712.0 63 95859.0 64 84264.0 65 78522.0 66 67742.0 67 56962.0 68 50206.5 69 43451.0 70 36998.0 71 30545.0 72 24019.5 73 17494.0 74 13894.0 75 10294.0 76 6711.5 77 3129.0 78 1954.5 79 780.0 80 787.0 81 794.0 82 427.5 83 61.0 84 178.5 85 296.0 86 163.0 87 30.0 88 16.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1316630.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.869532522039364 #Duplication Level Percentage of deduplicated Percentage of total 1 76.42221477996036 8.306737489570564 2 8.007896874013824 1.7408419101046124 3 3.71172718492231 1.21034218048352 4 2.2329842180259325 0.9708597831613405 5 1.4479095878873207 0.7869050177256923 6 1.0249077958832928 0.6684161171667081 7 0.6762867670482406 0.5145644706058997 8 0.5084891200477731 0.44216312219699583 9 0.3972774192882434 0.38863978463028875 >10 2.6969310815034078 5.678684562779897 >50 0.482293948518133 3.8447680550249954 >100 2.132357938564865 55.71772879041659 >500 0.2383347646467159 16.8526503407282 >1k 0.020388519689542067 2.8766983754046933 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAATATCTCTGGGGGAGGCCATGGCCATGGGCAGCGTGGAGGCCTCTTATAA 2367 0.17977715835124522 No Hit GTCGATCTCTGGGTTGATACCACCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 1727 0.13116820974761323 No Hit TGTTATCTCTGGGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATT 1702 0.12926942269278385 No Hit TTTTATCTCTGGGGTGGCAGTCCTCCTGCCTCAGCTTCCCAAGTGCTGAGTT 1653 0.12554780006531827 No Hit TGTAATCTCTGGGGCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATC 1519 0.11537030145143282 No Hit TAGCATCTCTGGGCAAACGAGAACTTTGAAGGCCGAAGTGGAGAAGGGTTCC 1456 0.1105853580732628 No Hit GACGATCTCTGGGTGGCTAACACGGTGAAACCCCGTCTCTACCAAAAAATAC 1411 0.10716754137456992 No Hit GGGCATCTCTGGGGGGAATTCGTGGAGAAAGAAATGGCCCGGTGGGCTGCAA 1382 0.10496494839096786 No Hit CAAGATCTCTGGGGCGATCCTGCCCAAAATCCGTGAAATTGTGCTAATGGGC 1345 0.10215474354982038 No Hit TGCGATCTCTGGGATGTACATCTTCCCTGTCCACTGGCAGTTTGGCCAGCTG 1343 0.10200284058543402 No Hit GTCGATCTCTGGGTTGATACCACCGAAAAAAAAAAAAAAAAAAAAAAAAAAA 1321 0.10033190797718418 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.002962107805533825 0.0 0.0 0.0 0.0 12 0.009493935274146876 0.0 0.0 0.0 0.0 13 0.01260794604406705 0.0 0.0 0.0 0.0 14 0.03987452815141687 0.0 0.0 0.0 0.0 15 0.0625840213271762 0.0 0.0 0.0 0.0 16 0.07974905630283374 0.0 0.0 0.0 0.0 17 0.0953950616346278 0.0 0.0 0.0 0.0 18 0.12554780006531827 0.0 0.0 0.0 0.0 19 0.15038393474248649 0.0 0.0 0.0 0.0 20 0.1768910020279046 0.0 0.0 0.0 0.0 21 0.20560066229692472 0.0 0.0 0.0 0.0 22 0.24433591821544398 0.0 0.0 0.0 0.0 23 0.27395699627078224 0.0 0.0 0.0 0.0 24 0.30547686138094987 0.0 0.0 0.0 0.0 25 0.3314522682910157 0.0 0.0 0.0 0.0 26 0.37558007944525035 0.0 0.0 0.0 0.0 27 0.4168976857583376 0.0 0.0 0.0 0.0 28 0.4586710009645838 0.0 0.0 0.0 0.0 29 0.5087230277298862 0.0 0.0 0.0 0.0 30 0.5773831676325164 0.0 0.0 0.0 0.0 31 0.6385241107980222 0.0 0.0 0.0 0.0 32 0.692677517601756 0.0 0.0 0.0 0.0 33 0.7354382020765136 0.0 0.0 0.0 0.0 34 0.7810850428746117 0.0 0.0 0.0 0.0 35 0.8236938243849828 0.0 0.0 0.0 0.0 36 0.8695685196296605 0.0 0.0 0.0 0.0 37 0.9173420019291676 0.0 0.0 0.0 0.0 38 0.9677737861054359 0.0 0.0 0.0 0.0 39 1.0150156080295907 0.0 0.0 0.0 0.0 40 1.069852578173063 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGTAGT 145 0.0 46.000004 42 TGATCGT 40 5.6115823E-9 46.0 35 TCACGGG 25 3.41743E-5 46.0 32 TCACGAA 50 1.6370905E-11 46.0 41 TGTTTTA 50 1.6370905E-11 46.0 29 CTTAAGT 20 6.3117914E-4 46.0 25 AACGTTA 40 5.6115823E-9 46.0 43 TGTCATA 85 0.0 46.0 24 TTTAGGG 45 3.110472E-10 46.0 28 GTGTTAC 40 5.6115823E-9 46.0 40 ACAACCC 20 6.3117914E-4 46.0 28 GTCATCG 20 6.3117914E-4 46.0 31 GTCATAG 85 0.0 46.0 25 TTAGGTA 40 5.6115823E-9 46.0 24 CTTCGAA 45 3.110472E-10 46.0 26 GTGCAAT 20 6.3117914E-4 46.0 22 AGCAATT 25 3.41743E-5 46.0 44 AACCGTG 85 0.0 46.0 21 AACGTAC 40 5.6115823E-9 46.0 15 CTAGAAG 30 1.861612E-6 46.0 43 >>END_MODULE