##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527935_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1306754 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.87847750992153 33.0 31.0 34.0 30.0 34.0 2 32.253291744276275 34.0 31.0 34.0 30.0 34.0 3 32.486722060923476 34.0 31.0 34.0 30.0 34.0 4 36.016154532528695 37.0 35.0 37.0 35.0 37.0 5 35.974465737238994 37.0 35.0 37.0 35.0 37.0 6 36.08308526317884 37.0 35.0 37.0 35.0 37.0 7 35.95715720020754 37.0 35.0 37.0 35.0 37.0 8 36.03893693839851 37.0 36.0 37.0 35.0 37.0 9 37.72784548583743 39.0 38.0 39.0 35.0 39.0 10 38.00385611982056 39.0 38.0 39.0 35.0 39.0 11 38.175589284593734 39.0 39.0 39.0 37.0 39.0 12 38.07684384360025 39.0 39.0 39.0 37.0 39.0 13 38.11022656138799 39.0 39.0 39.0 37.0 39.0 14 38.687443849416184 40.0 39.0 40.0 36.0 40.0 15 38.149663211285365 40.0 38.0 40.0 34.0 40.0 16 37.71002652373745 40.0 37.0 40.0 33.0 40.0 17 37.66778521435557 40.0 37.0 40.0 33.0 40.0 18 37.76445911013091 40.0 37.0 40.0 33.0 40.0 19 37.91520515720633 40.0 38.0 40.0 33.0 40.0 20 37.96368023361704 40.0 38.0 40.0 34.0 40.0 21 37.990981470116026 40.0 38.0 40.0 34.0 40.0 22 37.95922338864086 40.0 38.0 40.0 34.0 40.0 23 37.857873784966415 40.0 37.0 40.0 34.0 40.0 24 37.84866700235852 40.0 37.0 40.0 33.0 40.0 25 37.81580389269901 40.0 37.0 40.0 33.0 40.0 26 37.75283947858587 40.0 37.0 40.0 33.0 40.0 27 37.73824453569685 40.0 37.0 40.0 33.0 40.0 28 37.53734367753992 40.0 37.0 40.0 33.0 40.0 29 37.59759679327555 40.0 37.0 40.0 33.0 40.0 30 37.62191353537085 40.0 37.0 40.0 33.0 40.0 31 37.591185487092446 40.0 37.0 40.0 33.0 40.0 32 37.540865380936275 40.0 37.0 40.0 33.0 40.0 33 37.467097097081776 40.0 37.0 40.0 33.0 40.0 34 37.412353817168345 40.0 36.0 40.0 33.0 40.0 35 37.23977504564746 40.0 36.0 40.0 33.0 40.0 36 36.79255468129426 40.0 35.0 40.0 31.0 40.0 37 36.88164643077427 39.0 35.0 40.0 32.0 40.0 38 36.78320479600598 39.0 35.0 40.0 32.0 40.0 39 36.677395286335454 39.0 35.0 40.0 31.0 40.0 40 36.490090713324776 39.0 35.0 40.0 31.0 40.0 41 36.34801806613946 39.0 35.0 40.0 31.0 40.0 42 36.026889529322276 38.0 35.0 40.0 30.0 40.0 43 35.81894985590249 38.0 35.0 40.0 30.0 40.0 44 35.64405924910121 38.0 35.0 40.0 30.0 40.0 45 35.22135918466674 37.0 35.0 40.0 28.0 40.0 46 35.18072338022306 37.0 34.0 40.0 28.0 40.0 47 35.06413984575521 37.0 34.0 40.0 28.0 40.0 48 34.83249716473031 37.0 34.0 40.0 27.0 40.0 49 34.63447749155541 36.0 34.0 40.0 27.0 40.0 50 34.37453338577881 36.0 34.0 40.0 26.0 40.0 51 34.21557003077856 35.0 34.0 39.0 26.0 40.0 52 33.66818773847258 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 7.0 15 3.0 16 24.0 17 50.0 18 122.0 19 291.0 20 511.0 21 994.0 22 1693.0 23 2457.0 24 3874.0 25 5571.0 26 7778.0 27 10953.0 28 14337.0 29 18978.0 30 24234.0 31 30462.0 32 37127.0 33 47127.0 34 67006.0 35 112561.0 36 115074.0 37 219148.0 38 386186.0 39 200184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.351931580083168 21.171850248784395 33.56071609499569 16.91550207613675 2 20.271374719342738 24.34321991744429 34.09417533828096 21.291230024932005 3 22.426944933782487 22.108904966045635 32.72873088584385 22.735419214328022 4 21.808771964730926 18.37009873319691 34.36507559953901 25.45605370253315 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.39085703965705 0.3021991897480321 0.2555186362544136 0.05142513434051091 12 99.43677233817536 0.20677189432747098 0.2499322749346855 0.1065234925624869 13 98.4189832210194 0.8647381220949009 0.24335108214706058 0.4729275747386272 14 63.908432650674875 17.31588347921644 10.196563392956898 8.579120477151783 15 32.09464061330595 25.755038821384897 18.905853741408098 23.244466823901057 16 30.565661172646113 15.958321153024976 30.184028516461396 23.29198915786751 17 21.71977281110293 18.461087549760705 31.374841783533856 28.444297855602507 18 22.882501220581688 16.737274192388163 35.93002202403819 24.45020256299196 19 22.053959658818723 19.25733535156579 30.693764855512207 27.99494013410328 20 23.844809352028 17.656651519719855 27.83163472237315 30.666904405879 21 28.239439098713298 17.57836593574613 22.3377162036619 31.84447876187867 22 27.727713096726696 21.46739172024727 22.474620318744 28.33027486428203 23 27.658304470466515 18.370481360684565 21.988300781937532 31.98291338691138 24 26.597508023698417 21.37517849572299 20.674281463840938 31.353032016737657 25 31.32992131648344 17.659482963128482 23.663443922880663 27.34715179750741 26 29.557973421164196 19.092882057372695 20.60579114355112 30.743353377911987 27 29.71385585963387 21.752372673050935 20.591940028498097 27.9418314388171 28 30.049802793792864 22.913187945091426 19.945605676355306 27.091403584760403 29 30.004652750249853 23.224034516060406 19.447654263924196 27.323658469765544 30 31.163631410349613 21.86180413451958 18.417085388680654 28.557479066450153 31 28.85608155781425 21.44099042359924 20.590256467552422 29.11267155103409 32 28.917301955838663 24.366483668693572 18.57939596894289 28.13681840652487 33 30.543698354854854 23.17322158570014 19.164127295573614 27.118952763871395 34 29.490248355849687 23.947123942226312 19.476657427488263 27.085970274435738 35 29.1450418364895 25.003252333645047 20.032997794535163 25.81870803533029 36 31.02397237735641 24.392425812356418 19.82484844125214 24.758753369035027 37 30.243106200554966 24.44936078251913 19.23277066685849 26.07476235006742 38 29.77974431300765 26.1288658768215 20.16156063038644 23.929829179784413 39 30.964665116770256 23.571689851341567 20.221633145947898 25.242011885940276 40 30.621371734848335 25.756110178350323 19.508109406973308 24.11440867982803 41 30.040313632099082 26.04652444147866 19.301184461650777 24.61197746477149 42 31.48580375495311 24.825789704871767 18.36068609700066 25.327720443174464 43 30.089443001513672 26.003899739354154 17.531991484242635 26.374665774889532 44 30.267058681282016 25.352897331862 19.795845277688073 24.584198709167907 45 27.823676070629972 25.561276261637616 20.170743690090102 26.44430397764231 46 28.986021852621075 24.045535732050563 20.41677316465073 26.551669250677634 47 29.904633924977464 22.73924548920455 21.915218931795884 25.440901654022102 48 29.605725331623244 22.308177361615115 21.752372673050935 26.333724633710702 49 28.75369044211841 21.600163458462728 22.086865622756847 27.559280476662018 50 28.487687812702315 23.74739239367165 21.141622677259836 26.623297116366203 51 28.124803903412577 24.25896534466319 21.913382319855153 25.702848432069082 52 29.21108334085834 24.40887879432548 20.039808563815377 26.3402293010008 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 10.5 8 20.0 9 21.0 10 22.0 11 88.5 12 155.0 13 206.5 14 368.5 15 479.0 16 598.5 17 718.0 18 979.0 19 1240.0 20 1937.0 21 2634.0 22 4317.0 23 6000.0 24 8328.5 25 10657.0 26 14000.0 27 17343.0 28 16833.0 29 16323.0 30 14995.0 31 13667.0 32 12700.5 33 11734.0 34 13024.0 35 14314.0 36 13666.5 37 13019.0 38 13340.0 39 17414.0 40 21167.0 41 24131.0 42 27095.0 43 28672.0 44 30249.0 45 36283.0 46 42317.0 47 43793.5 48 45270.0 49 55743.0 50 66216.0 51 72014.5 52 77813.0 53 87976.0 54 98139.0 55 104643.5 56 111148.0 57 113002.5 58 114857.0 59 117259.0 60 119661.0 61 110621.5 62 101582.0 63 95353.5 64 83518.5 65 77912.0 66 66947.5 67 55983.0 68 49258.0 69 42533.0 70 36540.5 71 30548.0 72 23975.5 73 17403.0 74 13843.0 75 10283.0 76 6744.5 77 3206.0 78 2005.5 79 805.0 80 798.0 81 791.0 82 433.0 83 75.0 84 194.0 85 313.0 86 165.5 87 18.0 88 9.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1306754.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.273427699530288 #Duplication Level Percentage of deduplicated Percentage of total 1 76.87080425314403 9.434682582057087 2 8.589959975418925 2.1085650540032628 3 3.7139849667948006 1.367499779012951 4 2.1276427511036298 1.0445387790440046 5 1.3681134450681578 0.8395720726399668 6 0.929899498721907 0.6847832559235669 7 0.6167227850073483 0.5298511758708456 8 0.46121738325585776 0.45285745657258575 9 0.33667369362309235 0.3718926213315152 >10 2.391810750200625 5.601158994984318 >50 0.46247219284887503 4.200014044779523 >100 1.9196114118111673 55.4490096757103 >500 0.1938161472105244 15.22746502933719 >1k 0.017270745791036827 2.6881094787328657 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAATATCTCTGGGGGAGGCCATGGCCATGGGCAGCGTGGAGGCCTCTTATAA 2283 0.17470771086218218 No Hit TTTTATCTCTGGGGTGGCAGTCCTCCTGCCTCAGCTTCCCAAGTGCTGAGTT 1657 0.1268027494080753 No Hit GTCGATCTCTGGGTTGATACCACCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 1615 0.12358867851179334 No Hit TGTTATCTCTGGGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATT 1551 0.11869104666983993 No Hit TAGCATCTCTGGGCAAACGAGAACTTTGAAGGCCGAAGTGGAGAAGGGTTCC 1549 0.11853799567477886 No Hit TGTAATCTCTGGGGCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATC 1470 0.11249248136986761 No Hit GGGCATCTCTGGGGGGAATTCGTGGAGAAAGAAATGGCCCGGTGGGCTGCAA 1377 0.10537561009952906 No Hit GACGATCTCTGGGTGGCTAACACGGTGAAACCCCGTCTCTACCAAAAAATAC 1336 0.10223806470077766 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0026783924135682768 0.0 0.0 0.0 0.0 12 0.009948314678967885 0.0 0.0 0.0 0.0 13 0.012779758087597206 0.0 0.0 0.0 0.0 14 0.03765054478501692 0.0 0.0 0.0 0.0 15 0.06267438247749768 0.0 0.0 0.0 0.0 16 0.0796630429292736 0.0 0.0 0.0 0.0 17 0.0955038209180917 0.0 0.0 0.0 0.0 18 0.12833325935868573 0.0 0.0 0.0 0.0 19 0.1554998109820211 0.0 0.0 0.0 0.0 20 0.1813654291473376 0.0 0.0 0.0 0.0 21 0.21044511820893602 0.0 0.0 0.0 0.0 22 0.250008800432216 0.0 0.0 0.0 0.0 23 0.27947111698146704 0.0 0.0 0.0 0.0 24 0.3136780143776105 0.0 0.0 0.0 0.0 25 0.341303718986129 0.0 0.0 0.0 0.0 26 0.38293358964273305 0.0 0.0 0.0 0.0 27 0.4252521897771118 0.0 0.0 0.0 0.0 28 0.46320883655225087 0.0 0.0 0.0 0.0 29 0.5135626139273345 0.0 0.0 0.0 0.0 30 0.5871036170541662 0.0 0.0 0.0 0.0 31 0.6505432545069691 0.0 0.0 0.0 0.0 32 0.7028101693203158 0.0 0.0 0.0 0.0 33 0.7473480088830797 0.0 0.0 0.0 0.0 34 0.7957886488199003 0.0 0.0 0.0 0.0 35 0.837648095969096 0.0 0.0 0.0 0.0 36 0.8835633944874093 0.0 0.0 0.0 0.0 37 0.9247341121588302 0.0 0.0 0.0 0.0 38 0.9748583130413222 0.0 0.0 0.0 0.0 39 1.0268191258645467 0.0 0.0 0.0 0.0 40 1.0839071470223163 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATGCCC 115 0.0 46.000004 19 CCGTAAA 75 0.0 46.000004 19 CGTAAAC 75 0.0 46.000004 20 TCACGGT 60 0.0 46.0 27 CGGACAA 30 1.861601E-6 46.0 24 TCACGAA 55 1.8189894E-12 46.0 41 TATTTCG 20 6.3117745E-4 46.0 37 AACGTTT 30 1.861601E-6 46.0 29 TTTAGCG 25 3.4174136E-5 46.0 16 ATCCTAG 40 5.6115823E-9 46.0 36 CTATGTG 20 6.3117745E-4 46.0 44 AACGTGT 20 6.3117745E-4 46.0 14 ACTATTC 30 1.861601E-6 46.0 43 AGCAATT 45 3.110472E-10 46.0 44 AACGTAC 60 0.0 46.0 15 AACGTAA 30 1.861601E-6 46.0 16 GAAATAG 20 6.3117745E-4 46.0 14 CGGGTAC 30 1.861601E-6 46.0 46 TCGTTTA 60 0.0 46.0 22 ACTATAG 55 1.8189894E-12 46.0 14 >>END_MODULE