##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527934_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1334500 Sequences flagged as poor quality 0 Sequence length 59 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51359310603222 31.0 31.0 34.0 30.0 34.0 2 31.99160134881978 33.0 31.0 34.0 30.0 34.0 3 32.21865118021731 34.0 31.0 34.0 30.0 34.0 4 35.82331360059948 37.0 35.0 37.0 35.0 37.0 5 35.64496515548895 37.0 35.0 37.0 33.0 37.0 6 35.8262907455976 37.0 35.0 37.0 35.0 37.0 7 35.67448932184339 37.0 35.0 37.0 33.0 37.0 8 35.79904608467591 37.0 35.0 37.0 33.0 37.0 9 37.45824803297115 39.0 37.0 39.0 34.0 39.0 10 37.7211090295991 39.0 37.0 39.0 35.0 39.0 11 37.94090895466467 39.0 37.0 39.0 35.0 39.0 12 37.85597377294867 39.0 37.0 39.0 35.0 39.0 13 37.86365155488947 39.0 38.0 39.0 35.0 39.0 14 38.11425852379168 40.0 38.0 40.0 34.0 40.0 15 37.598253278381414 40.0 37.0 40.0 33.0 40.0 16 37.18958186586737 39.0 36.0 40.0 32.0 40.0 17 37.0797377294867 39.0 36.0 40.0 32.0 40.0 18 37.13484301236418 39.0 36.0 40.0 32.0 40.0 19 37.2742053203447 40.0 36.0 40.0 32.0 40.0 20 37.42143199700262 40.0 37.0 40.0 32.0 40.0 21 37.394397901835895 40.0 36.0 40.0 32.0 40.0 22 37.385575121768454 40.0 36.0 40.0 32.0 40.0 23 37.29388759835144 40.0 36.0 40.0 32.0 40.0 24 37.26071337579618 40.0 36.0 40.0 32.0 40.0 25 37.207080554514796 40.0 36.0 40.0 32.0 40.0 26 37.02789509179468 40.0 36.0 40.0 31.0 40.0 27 36.916313975271635 39.0 36.0 40.0 31.0 40.0 28 36.88080029973773 39.0 36.0 40.0 31.0 40.0 29 36.78263019857624 39.0 35.0 40.0 31.0 40.0 30 36.749700262270515 39.0 35.0 40.0 31.0 40.0 31 36.715759460472086 39.0 35.0 40.0 31.0 40.0 32 36.60290745597602 39.0 35.0 40.0 30.0 40.0 33 36.47311802173098 39.0 35.0 40.0 30.0 40.0 34 36.412514799550394 39.0 35.0 40.0 30.0 40.0 35 36.261757212439115 39.0 35.0 40.0 30.0 40.0 36 36.07552341701012 38.0 35.0 40.0 30.0 40.0 37 35.938947920569504 38.0 35.0 40.0 30.0 40.0 38 35.717380292244286 38.0 35.0 40.0 29.0 40.0 39 35.542835518920946 38.0 34.0 40.0 28.0 40.0 40 35.298717871862124 38.0 34.0 40.0 27.0 40.0 41 35.127077557137504 38.0 34.0 40.0 27.0 40.0 42 34.98590558261521 37.0 34.0 40.0 27.0 40.0 43 34.71907680779318 37.0 33.0 40.0 26.0 40.0 44 34.53429748969651 37.0 33.0 40.0 25.0 40.0 45 34.28031022855002 36.0 33.0 40.0 24.0 40.0 46 34.02663694267516 36.0 33.0 40.0 23.0 40.0 47 33.86098763581866 36.0 33.0 39.0 23.0 40.0 48 33.58288497564631 35.0 33.0 39.0 23.0 40.0 49 33.40518621206444 35.0 32.0 39.0 23.0 40.0 50 33.16463094792057 35.0 32.0 39.0 22.0 40.0 51 32.919985013113525 35.0 32.0 38.0 21.0 40.0 52 32.67142675159236 35.0 32.0 38.0 20.0 40.0 53 32.325733233420756 35.0 31.0 38.0 20.0 40.0 54 32.070109404271264 35.0 31.0 37.0 19.0 40.0 55 31.83519595354065 35.0 31.0 37.0 18.0 40.0 56 31.568065192956162 35.0 30.0 37.0 18.0 39.0 57 31.323887598351444 35.0 30.0 37.0 15.0 39.0 58 31.0712544023979 34.0 30.0 36.0 15.0 39.0 59 30.48784263769202 34.0 29.0 36.0 13.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 6.0 15 26.0 16 93.0 17 219.0 18 598.0 19 1192.0 20 2119.0 21 3316.0 22 4942.0 23 7270.0 24 10126.0 25 13319.0 26 17315.0 27 22005.0 28 27236.0 29 32584.0 30 38728.0 31 46556.0 32 56559.0 33 70234.0 34 94617.0 35 124092.0 36 151779.0 37 234679.0 38 312896.0 39 61988.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.334657174971902 21.415736230798053 33.21626077182465 17.033345822405398 2 19.822480329711503 24.80854252529037 33.988160359685274 21.380816785312852 3 22.379692768827276 22.343799175721244 32.52251779692769 22.753990258523793 4 21.817609591607344 18.59685275384039 34.16418134132634 25.421356313225928 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 0.0 100.0 10 0.0 0.0 100.0 0.0 11 99.37324840764332 0.31457474709629074 0.2627201198950918 0.049456725365305355 12 99.43154739602848 0.20636942675159234 0.23731734732109405 0.12476582989883851 13 98.39925065567628 0.8783064818284001 0.233870363431997 0.4885724990633196 14 63.49014612214312 17.567028849756465 10.3047583364556 8.638066691644811 15 31.922592731360062 25.98059198201574 18.999775196702885 23.097040089921318 16 30.491719745222927 16.116298239040837 30.150468340202323 23.24151367553391 17 21.710303484451103 18.58613713001124 31.2129636568003 28.490595728737354 18 22.77137504683402 16.87081303859123 35.91255151742225 24.44526039715249 19 22.07740726863994 19.41790932933683 30.619632821281378 27.88505058074185 20 23.816410640689398 17.737279880104907 27.827500936680405 30.61880854252529 21 28.112701386286997 17.738703634319968 22.344323716747848 31.804271262645184 22 27.677482203072312 21.67703259647808 22.48092918696141 28.164556013488195 23 27.644511052828776 18.444960659423003 22.095091794679654 31.815436493068567 24 26.442712626451854 21.535256650430874 20.73375796178344 31.288272761333836 25 31.192506556762833 17.743724241288874 23.79857624578494 27.265192956163357 26 29.480779318096666 19.21738478831023 20.713076058448856 30.58875983514425 27 29.553091045335332 21.849531659797677 20.740427126264517 27.856950168602474 28 29.826002248032975 23.035593855376547 20.08265267890596 27.055751217684527 29 29.844511052828775 23.453503184713377 19.54267515923567 27.15931060322218 30 31.056500562008242 22.088347695766206 18.505732484076436 28.349419258149123 31 28.638666167103782 21.720194829524168 20.640989134507308 29.000149868864746 32 28.704233795429 24.732259273136005 18.640164855751216 27.923342075683777 33 30.41671037841888 23.46257025103035 19.21251405020607 26.908205320344695 34 29.342150618209068 24.214687148744847 19.589059572873737 26.854102660172348 35 28.956463094792056 25.29981266391907 20.07733233420757 25.666391907081305 36 30.76238291494942 24.830573248407646 19.794454852004495 24.612588984638442 37 30.003821656050956 24.749044585987264 19.238666167103784 26.008467590857997 38 29.62562757587111 26.44263769201948 20.205695016860247 23.726039715249154 39 30.739752716373175 23.794829524166357 20.298988385162982 25.16642937429749 40 30.315623829149494 26.146496815286625 19.51262645185463 24.025252903709255 41 29.876732858748596 26.335406519295617 19.28100412139378 24.50685650056201 42 31.325065567628325 25.185762457849382 18.30738104158861 25.181790932933684 43 30.027875608842265 26.313001124016484 17.381491195204195 26.277632071937056 44 29.6817534657175 25.89067066316973 19.9251405020607 24.50243536905208 45 27.632446609216938 25.87126264518546 20.097040089921318 26.399250655676283 46 28.887073810415885 24.219258149119522 20.418284001498687 26.475384038965906 47 29.64061446234545 23.11682278006744 21.882502810041213 25.3600599475459 48 29.4404645934807 22.554065192956163 21.624353690520795 26.381116523042337 49 28.43312101910828 22.037092544023977 21.953765455226677 27.576020981641065 50 28.229748969651553 24.10513300861746 20.999325590108654 26.665792431622332 51 27.95339078306482 24.60854252529037 21.8129636568003 25.62510303484451 52 28.894417384788312 24.86309479205695 19.97107530910453 26.27141251405021 53 26.909179467965533 25.572798801049085 22.059348070438368 25.45867366054702 54 27.646009741476206 24.43611839640315 22.191532409142 25.726339452978642 55 27.937954289996252 25.34507306107156 20.398726114649683 26.3182465342825 56 27.836118396403148 24.52439115773698 21.361109029599103 26.27838141626077 57 29.803896590483326 23.76155863619333 20.22862495316598 26.205919820157362 58 30.38126639190708 23.066017234919446 20.724241288872236 25.82847508430124 59 27.556762832521542 24.336230798051705 20.62817534657175 27.478831022854997 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 4.5 7 9.0 8 14.5 9 54.5 10 89.0 11 129.0 12 169.0 13 224.5 14 304.0 15 328.0 16 400.0 17 472.0 18 546.5 19 1080.0 20 1539.0 21 2242.0 22 2945.0 23 4529.5 24 6114.0 25 7449.0 26 10313.0 27 11842.0 28 12784.0 29 13726.0 30 14011.0 31 15440.0 32 16584.0 33 16274.5 34 15965.0 35 16030.5 36 16137.0 37 16178.0 38 15758.5 39 15339.0 40 18173.0 41 21007.0 42 25684.0 43 31062.5 44 31764.0 45 31020.0 46 30276.0 47 33722.5 48 42252.0 49 47335.0 50 53451.0 51 59567.0 52 70360.0 53 84954.0 54 88755.0 55 92138.0 56 95521.0 57 103964.0 58 108821.0 59 105235.0 60 100645.5 61 96056.0 62 87183.5 63 78311.0 64 81192.0 65 66474.0 66 48875.0 67 48036.5 68 47198.0 69 41842.0 70 31953.5 71 27421.0 72 23373.5 73 19326.0 74 14154.5 75 5912.5 76 2842.0 77 2083.5 78 1325.0 79 1029.0 80 733.0 81 713.0 82 408.0 83 123.0 84 92.5 85 62.0 86 50.5 87 23.5 88 8.0 89 4.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1334500.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.12494346222364 #Duplication Level Percentage of deduplicated Percentage of total 1 84.47723701429231 14.466679077146221 2 6.23160539949271 2.1343178029040044 3 2.4445784498949954 1.255898032302663 4 1.3743115719771695 0.9414003187835487 5 0.859546490727941 0.7359842528434363 6 0.5354585665017735 0.5501818606623712 7 0.39960208600136493 0.4790214191112002 8 0.27488858002695904 0.37659611130980897 9 0.1976730466783862 0.30466257735355723 >10 1.4521440086701796 4.851993927510147 >50 0.3102225365502661 3.970806837106717 >100 1.2895955232231293 51.958102142433745 >500 0.14128947209181614 15.412762932245737 >1k 0.011847253871052905 2.5615927082868497 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAATATCTCTGGGGGAGGCCATGGCCATGGGCAGCGTGGAGGCCTCTTATAAGTGTTTA 2363 0.1770700636942675 No Hit TTTTATCTCTGGGGTGGCAGTCCTCCTGCCTCAGCTTCCCAAGTGCTGAGTTTATAGGC 1573 0.11787186212064443 No Hit TAGCATCTCTGGGCAAACGAGAACTTTGAAGGCCGAAGTGGAGAAGGGTTCCATGTGAA 1557 0.11667291120269765 No Hit TGTTATCTCTGGGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTG 1545 0.11577369801423754 No Hit TGTAATCTCTGGGGCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGA 1494 0.11195204196328212 No Hit GACGATCTCTGGGTGGCTAACACGGTGAAACCCCGTCTCTACCAAAAAATACAAAAAAT 1421 0.10648182840014987 No Hit GGGCATCTCTGGGGGGAATTCGTGGAGAAAGAAATGGCCCGGTGGGCTGCAATAAAGGC 1390 0.10415886099662795 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.002847508430123642 0.0 0.0 0.0 0.0 12 0.008092918696140877 0.0 0.0 0.0 0.0 13 0.010565754964406145 0.0 0.0 0.0 0.0 14 0.03724241288872237 0.0 0.0 0.0 0.0 15 0.06294492319220682 0.0 0.0 0.0 0.0 16 0.07860621955788685 0.0 0.0 0.0 0.0 17 0.09441738478831023 0.0 0.0 0.0 0.0 18 0.12296740352191832 0.0 0.0 0.0 0.0 19 0.15211689771449982 0.0 0.0 0.0 0.0 20 0.1756463094792057 0.0 0.0 0.0 0.0 21 0.2041213937804421 0.0 0.0 0.0 0.0 22 0.24091420007493444 0.0 0.0 0.0 0.0 23 0.26616710378418884 0.0 0.0 0.0 0.0 24 0.2995878606219558 0.0 0.0 0.0 0.0 25 0.3250655676283252 0.0 0.0 0.0 0.0 26 0.3635069314349944 0.0 0.0 0.0 0.0 27 0.4053203446983889 0.0 0.0 0.0 0.0 28 0.44735856125889845 0.0 0.0 0.0 0.0 29 0.48909704008992133 0.0 0.0 0.0 0.0 30 0.554140127388535 0.0 0.0 0.0 0.0 31 0.6127388535031847 0.0 0.0 0.0 0.0 32 0.6658673660547021 0.0 0.0 0.0 0.0 33 0.7091045335331585 0.0 0.0 0.0 0.0 34 0.750917946796553 0.0 0.0 0.0 0.0 35 0.7919070813038591 0.0 0.0 0.0 0.0 36 0.8367928062944923 0.0 0.0 0.0 0.0 37 0.8802547770700637 0.0 0.0 0.0 0.0 38 0.9277632071937055 0.0 0.0 0.0 0.0 39 0.9796178343949045 0.0 0.0 0.0 0.0 40 1.0341701011614837 0.0 0.0 0.0 0.0 41 1.0902210565754964 0.0 0.0 0.0 0.0 42 1.1405020606968903 0.0 0.0 0.0 0.0 43 1.188010490820532 0.0 0.0 0.0 0.0 44 1.2346946421880853 0.0 0.0 0.0 0.0 45 1.2806294492319221 0.0 0.0 0.0 0.0 46 1.3192206819033345 0.0 0.0 0.0 0.0 47 1.3546646684151367 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAA 25 1.4788615E-5 53.000004 41 ACTATTC 25 1.4788615E-5 53.000004 43 TACCCGT 25 1.4788615E-5 53.000004 35 CTACTAC 25 1.4788615E-5 53.000004 33 AGTCACG 25 1.4788615E-5 53.000004 39 ATAGGCG 50 3.6379788E-12 53.000004 37 CGAAAGT 55 0.0 53.000004 38 CGTGATA 25 1.4788615E-5 53.000004 17 ACACCCG 25 1.4788615E-5 53.000004 15 GACGTAA 25 1.4788615E-5 53.000004 48 TTCACCG 25 1.4788615E-5 53.000004 29 CAATTCC 75 0.0 53.000004 25 CGACAAT 25 1.4788615E-5 53.000004 38 CGTTCAC 25 1.4788615E-5 53.000004 18 ATACTCA 25 1.4788615E-5 53.000004 17 CCACTAA 25 1.4788615E-5 53.000004 46 TAACCGG 55 0.0 53.000004 35 CGGATTA 25 1.4788615E-5 53.000004 24 TTAAGTC 55 0.0 53.000004 27 CTAAACT 50 3.6379788E-12 53.000004 27 >>END_MODULE