##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527926_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13063257 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.508209476396278 31.0 31.0 33.0 30.0 34.0 2 32.06949369517878 33.0 31.0 34.0 30.0 34.0 3 32.325400319384364 34.0 31.0 34.0 30.0 34.0 4 35.98762659266368 37.0 35.0 37.0 35.0 37.0 5 35.684907906198276 37.0 35.0 37.0 33.0 37.0 6 35.96628781015332 37.0 35.0 37.0 35.0 37.0 7 36.315449891248406 37.0 37.0 37.0 35.0 37.0 8 36.263700545736796 37.0 37.0 37.0 35.0 37.0 9 37.765382017669864 39.0 38.0 39.0 35.0 39.0 10 36.95724573129044 39.0 37.0 39.0 34.0 39.0 11 38.06327503164027 39.0 37.0 39.0 35.0 39.0 12 38.25135883034376 39.0 39.0 39.0 37.0 39.0 13 38.19338883097837 39.0 39.0 39.0 37.0 39.0 14 38.734963416856914 40.0 39.0 40.0 36.0 40.0 15 38.254896003347405 40.0 38.0 40.0 35.0 40.0 16 37.7769884646685 40.0 37.0 40.0 34.0 40.0 17 37.822837826738 40.0 37.0 40.0 33.0 40.0 18 37.86445248684918 40.0 38.0 40.0 33.0 40.0 19 37.982932204426504 40.0 38.0 40.0 34.0 40.0 20 37.98219999805561 40.0 38.0 40.0 34.0 40.0 21 37.946729670862325 40.0 38.0 40.0 34.0 40.0 22 37.918200415103215 40.0 38.0 40.0 34.0 40.0 23 37.85909616568058 40.0 37.0 40.0 34.0 40.0 24 37.832365159776 40.0 37.0 40.0 33.0 40.0 25 37.79768728426609 40.0 37.0 40.0 33.0 40.0 26 37.82588170775481 40.0 37.0 40.0 34.0 40.0 27 37.86740726298196 40.0 37.0 40.0 34.0 40.0 28 37.715759936438516 40.0 37.0 40.0 34.0 40.0 29 37.84117023801951 40.0 37.0 40.0 34.0 40.0 30 37.883801336833535 40.0 37.0 40.0 34.0 40.0 31 37.89576037583889 40.0 37.0 40.0 34.0 40.0 32 37.84476030747921 40.0 37.0 40.0 34.0 40.0 33 37.79880890347637 40.0 37.0 40.0 34.0 40.0 34 37.74795167851325 40.0 37.0 40.0 34.0 40.0 35 37.63700522771618 40.0 37.0 40.0 33.0 40.0 36 37.22183778517103 40.0 36.0 40.0 33.0 40.0 37 37.363340474737655 40.0 36.0 40.0 33.0 40.0 38 37.31101899013393 40.0 36.0 40.0 33.0 40.0 39 37.282642758999536 40.0 36.0 40.0 33.0 40.0 40 37.21017805896339 40.0 35.0 40.0 33.0 40.0 41 37.15876882771272 40.0 35.0 40.0 33.0 40.0 42 36.931152391781005 39.0 35.0 40.0 32.0 40.0 43 36.83436994311602 39.0 35.0 40.0 32.0 40.0 44 36.729862468448715 39.0 35.0 40.0 32.0 40.0 45 36.345214061087525 39.0 35.0 40.0 31.0 40.0 46 36.38724653430611 39.0 35.0 40.0 31.0 40.0 47 36.370962540199585 38.0 35.0 40.0 31.0 40.0 48 36.24531799382038 38.0 35.0 40.0 31.0 40.0 49 36.12761472885361 38.0 35.0 40.0 31.0 40.0 50 35.92142809408098 38.0 35.0 40.0 31.0 40.0 51 35.8866297279461 37.0 35.0 40.0 31.0 40.0 52 35.39185533898629 37.0 34.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 8.0 14 13.0 15 30.0 16 95.0 17 239.0 18 663.0 19 1394.0 20 2918.0 21 5505.0 22 9514.0 23 15900.0 24 24544.0 25 36621.0 26 53024.0 27 74543.0 28 103893.0 29 138838.0 30 186207.0 31 242060.0 32 313577.0 33 414942.0 34 627310.0 35 1103920.0 36 1046629.0 37 1950719.0 38 4294468.0 39 2415682.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.802662766261125 19.232738052998574 32.796882125185164 17.167717055555133 2 30.130739983145094 19.67590471503393 34.05217397162132 16.141181330199657 3 21.593841413362686 21.336792195085806 38.040819376056064 19.028547015495448 4 20.610847662263705 21.608355404781516 39.31808124114836 18.462715691806416 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.38026940754516 0.5389773775406853 0.05961759766343111 0.021135617250736167 12 99.38290274776038 0.488231992986129 0.10245530651352874 0.0264099527399637 13 96.95529223684414 1.6428215413659857 0.5759513113766345 0.8259349104132301 14 52.3663202829126 26.00807746490787 13.14446313044289 8.48113912173664 15 33.76504037239717 28.491210117048144 19.136529274437457 18.607220236117225 16 29.02990425741452 19.454313728957487 25.222178511836674 26.293603501791324 17 23.46799117555446 18.81817069051003 27.593394204829625 30.12044392910589 18 23.634366222757464 20.554927457983872 29.07729672622991 26.73340959302875 19 25.973943557873813 21.54900573417487 26.617381867324514 25.859668840626803 20 29.145840122413574 20.302073211910322 24.45944376658899 26.09264289908711 21 29.202793759626715 21.453570116549034 22.984474698767695 26.359161425056556 22 28.999023750355672 21.23135907071261 24.0827077045181 25.686909474413618 23 28.569697434567807 22.025839344659605 22.994104762694327 26.41035845807826 24 27.958739539457884 23.6701765876611 23.46777683390903 24.90330703897198 25 28.80841278710202 21.682946297389694 25.272372732160136 24.23626818334815 26 28.214043404336298 20.961112531124513 24.24853158749001 26.576312477049175 27 28.89876544570776 22.121940952398013 23.880461051941335 25.098832549952892 28 29.05641372591843 22.210831494779594 23.302159637523783 25.430595141778195 29 28.462105583622826 22.075589571574685 22.949981003971672 26.512323840830813 30 27.228025905025067 21.90975803354401 23.243139134444036 27.619076926986892 31 26.03644711269173 21.063897005164943 24.000699059966436 28.898956822176892 32 27.633514367818073 23.36593393209672 22.453282515991226 26.54726918409398 33 28.835320318661722 22.613617721828486 22.121542889342223 26.42951907016757 34 27.247515684641282 22.430148928402772 24.337422129871594 25.984913257084358 35 29.154635784934797 22.33445303877892 23.478570466767973 25.03234070951831 36 30.905477860536617 21.77925459171476 23.059279933021298 24.255987614727324 37 30.79546701102183 21.546341773724578 22.84526745512241 24.812923760131184 38 28.076397792679114 23.54725165400941 25.32979332795795 23.046557225353524 39 28.638462827455662 24.30219354943411 24.66545670807824 22.393886915031985 40 28.167186789634467 25.94617100467364 22.519590635015447 23.367051570676438 41 28.61868215560637 24.97100837869147 22.51334410706304 23.89696535863912 42 29.478306979645275 24.5833332376451 21.918247493714624 24.020112288995 43 29.29281725070555 23.224315344940393 22.47022316103863 25.012644243315428 44 28.5596233772328 22.999294892537137 23.405518240971602 25.03556348925846 45 27.17274107062274 23.50299010422898 23.31897780163094 26.005291023517334 46 26.130428269152173 22.75016100502348 23.696088961581328 27.42332176424302 47 26.627846332656553 21.308062759539983 24.455371275325902 27.60871963247757 48 27.36555669080077 21.288190226985506 23.537835931728203 27.80841715048552 49 28.132011794608342 22.088526620887887 23.503051344699106 26.276410239804665 50 26.92269623111602 23.485467674715423 23.335773000561804 26.256063093606745 51 26.530940943747794 23.452803538964286 23.337916417016064 26.678339100271852 52 27.398335652433385 22.783567681474842 24.672966320726903 25.145130345364862 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 1.0 3 1.5 4 2.0 5 24.0 6 46.0 7 221.0 8 396.0 9 966.5 10 1537.0 11 3025.5 12 4514.0 13 5925.5 14 8725.0 15 10113.0 16 11048.5 17 11984.0 18 13085.0 19 14186.0 20 18161.5 21 22137.0 22 27400.5 23 32664.0 24 42926.0 25 53188.0 26 62517.5 27 71847.0 28 88786.5 29 105726.0 30 117796.0 31 129866.0 32 152170.5 33 174475.0 34 201697.0 35 228919.0 36 256180.0 37 283441.0 38 316510.5 39 394592.5 40 439605.0 41 487923.0 42 536241.0 43 586815.0 44 637389.0 45 706860.5 46 776332.0 47 815957.0 48 855582.0 49 879101.5 50 902621.0 51 952432.5 52 1002244.0 53 1084103.0 54 1165962.0 55 1170658.5 56 1175355.0 57 1153677.0 58 1131999.0 59 1022036.5 60 912074.0 61 792207.5 62 672341.0 63 568322.0 64 401364.0 65 338425.0 66 282822.5 67 227220.0 68 193509.5 69 159799.0 70 125822.5 71 91846.0 72 66418.5 73 40991.0 74 31748.5 75 22506.0 76 13798.5 77 5091.0 78 3572.5 79 2054.0 80 1637.0 81 1220.0 82 651.0 83 82.0 84 47.0 85 12.0 86 6.0 87 0.0 88 2.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.3063257E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 5.368458975333151 #Duplication Level Percentage of deduplicated Percentage of total 1 65.36900574620729 3.5093082560683087 2 9.831467685305032 1.0555966187174728 3 4.8664421161196945 0.7837588456866607 4 3.0972875420273156 0.6651064441673639 5 1.9655472028193395 0.5275979761208226 6 1.2304392847435128 0.39633376930702885 7 0.8249622341792482 0.3100143137273332 8 0.6013937318196613 0.2582846061837087 9 0.4433522740932734 0.21421066455813575 >10 3.7858166511248257 4.646036987751925 >50 1.9212404620908587 7.730868344724875 >100 5.695761167458312 66.50563414961057 >500 0.34560862088463556 11.871218359845082 >1k 0.021525796429691615 1.4849264872436458 >5k 1.49484697428414E-4 0.0411041762872396 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 5.435091723296878E-4 0.0 0.0 0.0 0.0 12 0.0018372141036496488 0.0 0.0 0.0 0.0 13 0.0039193900877859175 0.0 0.0 0.0 0.0 14 0.015233566942761671 0.0 0.0 0.0 0.0 15 0.026187956035772703 0.0 0.0 0.0 0.0 16 0.03135512070228734 0.0 0.0 0.0 0.0 17 0.03623139313572411 0.0 0.0 0.0 0.0 18 0.04181193097555992 0.0 0.0 0.0 0.0 19 0.04876272433436776 1.531011753041374E-5 0.0 0.0 0.0 20 0.05742825085658194 1.531011753041374E-5 0.0 0.0 0.0 21 0.06559619855905767 1.531011753041374E-5 0.0 0.0 0.0 22 0.07518798719186187 1.531011753041374E-5 0.0 0.0 0.0 23 0.08543811087847387 1.531011753041374E-5 0.0 0.0 0.0 24 0.09502989951127808 1.531011753041374E-5 0.0 0.0 0.0 25 0.1053029883741857 1.531011753041374E-5 0.0 0.0 0.0 26 0.11597414029288408 1.531011753041374E-5 0.0 0.0 0.0 27 0.12676777315182577 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 28 0.13845704788629665 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 29 0.15105727461382717 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 30 0.16588512344203288 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 31 0.1790900998120147 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 32 0.19118509266104158 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 33 0.20193279516739202 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 34 0.21240491555819502 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 35 0.22223401101272064 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 36 0.23302764387166233 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 37 0.24341555861604805 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 38 0.2556942728754399 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 39 0.2704608812335239 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 40 0.29043292955194866 1.531011753041374E-5 0.0 2.296517629562061E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGTG 1351570 0.0 44.19345 5 ATTGTGG 1344445 0.0 44.170704 6 TTGTGGG 1306155 0.0 44.119545 7 TTATTGT 535140 0.0 44.07538 4 ATATTGT 295565 0.0 44.074028 4 GTATTGT 281360 0.0 43.99069 4 TGTGGGG 696405 0.0 43.906765 8 GTTATTG 110805 0.0 43.897297 3 TTTATTG 203265 0.0 43.8071 3 TGTGGGA 342700 0.0 43.76443 8 ACGTATT 9505 0.0 43.749603 2 TCTATTG 106305 0.0 43.723907 3 CTATTGT 254125 0.0 43.681217 4 TATATTG 112650 0.0 43.66223 3 CGGTATT 12345 0.0 43.63386 2 TGTATTG 101440 0.0 43.59661 3 CGTATTG 57905 0.0 43.57707 3 AATATTG 74880 0.0 43.561165 3 CATATTG 57965 0.0 43.49228 3 CTTATTG 113390 0.0 43.45639 3 >>END_MODULE