##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527925_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13146623 Sequences flagged as poor quality 0 Sequence length 59 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.166576998518934 31.0 31.0 33.0 30.0 34.0 2 31.749991309555313 31.0 31.0 34.0 30.0 34.0 3 32.04870756543335 33.0 31.0 34.0 30.0 34.0 4 35.817950130615294 37.0 35.0 37.0 35.0 37.0 5 35.406093488799364 37.0 35.0 37.0 33.0 37.0 6 35.69091096626107 37.0 35.0 37.0 33.0 37.0 7 36.09332807368097 37.0 35.0 37.0 35.0 37.0 8 36.07580494245556 37.0 35.0 37.0 35.0 37.0 9 37.39256362641569 39.0 37.0 39.0 33.0 39.0 10 36.54304325909399 37.0 35.0 39.0 32.0 39.0 11 37.71188137059989 39.0 37.0 39.0 35.0 39.0 12 37.99512407102569 39.0 38.0 39.0 35.0 39.0 13 37.944297178066186 39.0 38.0 39.0 35.0 39.0 14 38.097890614190426 40.0 38.0 40.0 34.0 40.0 15 37.58411646854101 40.0 37.0 40.0 33.0 40.0 16 37.08038505401729 39.0 36.0 40.0 32.0 40.0 17 37.04552446662538 39.0 36.0 40.0 32.0 40.0 18 37.03583528636974 39.0 36.0 40.0 32.0 40.0 19 37.24347803994988 40.0 36.0 40.0 32.0 40.0 20 37.350619623001286 40.0 36.0 40.0 32.0 40.0 21 37.289242492159396 40.0 36.0 40.0 32.0 40.0 22 37.28634494196723 40.0 36.0 40.0 32.0 40.0 23 37.24628484440453 40.0 36.0 40.0 32.0 40.0 24 37.20471728747375 40.0 36.0 40.0 32.0 40.0 25 37.19638389265441 40.0 36.0 40.0 32.0 40.0 26 37.09023640519698 40.0 36.0 40.0 32.0 40.0 27 37.00596251980451 40.0 36.0 40.0 31.0 40.0 28 37.01339416213578 39.0 36.0 40.0 31.0 40.0 29 37.002242248826946 40.0 36.0 40.0 31.0 40.0 30 36.99423000111892 39.0 36.0 40.0 31.0 40.0 31 36.999087522324174 39.0 36.0 40.0 31.0 40.0 32 36.888465729944485 39.0 35.0 40.0 31.0 40.0 33 36.7827856629037 39.0 35.0 40.0 31.0 40.0 34 36.71466740926548 39.0 35.0 40.0 31.0 40.0 35 36.6267572288336 39.0 35.0 40.0 31.0 40.0 36 36.47903396940796 39.0 35.0 40.0 30.0 40.0 37 36.39657918234972 39.0 35.0 40.0 30.0 40.0 38 36.1933442527408 38.0 35.0 40.0 30.0 40.0 39 36.10141235509682 38.0 35.0 40.0 30.0 40.0 40 35.977796046939204 38.0 35.0 40.0 30.0 40.0 41 35.92167577939978 38.0 35.0 40.0 30.0 40.0 42 35.87055786113285 38.0 35.0 40.0 29.0 40.0 43 35.715746089318905 38.0 34.0 40.0 29.0 40.0 44 35.61221562373851 38.0 34.0 40.0 29.0 40.0 45 35.40975610238462 38.0 34.0 40.0 28.0 40.0 46 35.24558900030829 38.0 34.0 40.0 28.0 40.0 47 35.18666725287551 37.0 34.0 40.0 28.0 40.0 48 35.0321216330612 37.0 34.0 40.0 27.0 40.0 49 34.93700138811313 37.0 34.0 40.0 27.0 40.0 50 34.742147698310056 37.0 33.0 40.0 27.0 40.0 51 34.60649035117231 36.0 33.0 39.0 27.0 40.0 52 34.45661231785532 36.0 33.0 39.0 26.0 40.0 53 34.269863294931326 36.0 33.0 39.0 26.0 40.0 54 34.134453768089344 35.0 33.0 39.0 26.0 40.0 55 33.99785732046929 35.0 33.0 39.0 26.0 40.0 56 33.79491493747101 35.0 33.0 39.0 25.0 40.0 57 33.64665290850738 35.0 33.0 38.0 25.0 40.0 58 33.47552546383965 35.0 32.0 38.0 25.0 40.0 59 32.85127990663458 35.0 31.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 6.0 13 20.0 14 33.0 15 157.0 16 527.0 17 1487.0 18 3712.0 19 7508.0 20 13604.0 21 22167.0 22 33686.0 23 48089.0 24 67192.0 25 90024.0 26 119336.0 27 154523.0 28 195893.0 29 244943.0 30 306442.0 31 383994.0 32 481997.0 33 617956.0 34 886822.0 35 1222598.0 36 1428431.0 37 2218480.0 38 3641192.0 39 955802.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.99491025185707 19.4049148591239 32.36282808140159 17.237346807617442 2 29.63440116903025 20.114937501440483 33.99916465239781 16.251496677131456 3 21.656185014204787 21.45201851456454 37.89041489970466 19.00138157152601 4 20.572697642580913 21.76699674129242 39.16452156572832 18.495784050398342 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 0.0 0.0 100.0 0.0 9 100.0 0.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.36634677970152 0.5478593247862968 0.06177251755070484 0.024021377961473453 12 99.37215055151427 0.4956177719555813 0.09894556191350433 0.03328611461665859 13 96.93736558810578 1.6640927483810863 0.573614988427066 0.8249266750860659 14 52.03483814816931 26.185568719814967 13.197016450536387 8.582576681479342 15 33.62913046186842 28.65592175268128 19.143920077422163 18.571027708028137 16 28.978696658449856 19.595305958039567 25.179842762662318 26.246154620848262 17 23.47446184468818 18.95690627167144 27.48681543541638 30.081816448224004 18 23.57432018853815 20.664287703389682 29.055172571693888 26.706219536378278 19 25.925897471921118 21.696104010893137 26.63353927468674 25.74445924249901 20 29.118184951374964 20.450453321738973 24.478993578807273 25.952368148078786 21 29.119599763376495 21.605822270859974 23.095383506471588 26.179194459291942 22 28.902950970754997 21.35738584730086 24.171363246667983 25.568299935276155 23 28.526010063572983 22.18489113135746 23.010350262573134 26.278748542496427 24 27.87030555299258 23.816937627252262 23.526779462680263 24.78597735707489 25 28.67988988502979 21.85732412042241 25.355020829303466 24.107765165244338 26 28.132585835921514 21.034276254822245 24.369064207591563 26.46407370166468 27 28.774796386874407 22.22097644391263 24.005617260037045 24.998609909175915 28 28.885311459832693 22.337006241070426 23.41420302384879 25.363479275248103 29 28.3867119335513 22.164064490173637 23.019074936582573 26.43014863969249 30 27.12540703418665 22.00908172387692 23.299603251724797 27.56590799021163 31 25.875983513028405 21.171429347293216 24.050092559891617 28.902494579786765 32 27.47647817998584 23.546913910895597 22.519037778751244 26.45757013036732 33 28.76339421918465 22.741726145185726 22.177938775608002 26.31694086002162 34 27.15921799841678 22.54018389361283 24.44124243921804 25.85935566875235 35 29.077102157717615 22.468720674503253 23.505717019496185 24.948460148282948 36 30.731709580475535 21.91562806661452 23.14663621220446 24.20602614070549 37 30.73885970564456 21.64170981399558 22.876962395590105 24.742468084769754 38 27.9126053892319 23.69130840672924 25.398028071543543 22.99805813249532 39 28.493355289795712 24.46389464427481 24.72548273423525 22.31726733169423 40 28.039208243820486 26.13677291879443 22.577045070814002 23.24697376657108 41 28.478530189844193 25.15569207392651 22.556416199049746 23.809361537179548 42 29.279199684968525 24.763743510405675 21.960902050663506 23.99615475396229 43 29.1822698498314 23.35329004262159 22.513728430487433 24.950711677059576 44 28.248935106757074 23.15748310421619 23.559114762779764 25.034467026246972 45 27.015127763228623 23.574479925377034 23.373401671288512 26.036990640105827 46 26.03574317145932 22.847745767106883 23.71868425830725 27.397826803126552 47 26.528926858250973 21.4197973122071 24.484211648877434 27.567064180664495 48 27.216959062414738 21.39975414218541 23.556779562325623 27.826507233074228 49 27.962382430834136 22.26054554085867 23.52525815945281 26.251813868854384 50 26.72879567627367 23.656295612949425 23.320939529489817 26.293969181287085 51 26.392344254490297 23.549058948446305 23.44316863729948 26.615428159763923 52 27.246624475350057 22.89823021470989 24.794975865665275 25.060169444274777 53 27.631879304670104 23.199699268777998 23.807558792855016 25.36086263369688 54 26.023960677962698 22.889551179797277 24.172808484734066 26.913679657505963 55 25.795285983328192 23.124478430696612 24.45590780233068 26.624327783644514 56 25.934629752446693 22.33757672978072 24.91963905863886 26.808154459133725 57 25.57374620083043 22.469998569214315 25.922824439401666 26.03343079055359 58 25.613398969453982 23.18213582301706 25.056533529561165 26.147931677967794 59 25.945157170780664 22.61919277673057 23.860964142654733 27.57468590983403 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 18.5 5 37.0 6 184.5 7 332.0 8 747.5 9 2409.5 10 3656.0 11 4719.5 12 5783.0 13 6589.0 14 7571.5 15 7748.0 16 8609.5 17 9471.0 18 10265.0 19 13183.0 20 15307.0 21 18418.5 22 21530.0 23 27192.0 24 32854.0 25 41934.0 26 60203.0 27 69392.0 28 81393.0 29 93394.0 30 110710.0 31 146133.0 32 164240.0 33 179679.5 34 195119.0 35 212288.5 36 250376.0 37 271294.0 38 305288.5 39 339283.0 40 378845.5 41 418408.0 42 452365.0 43 508039.0 44 529756.0 45 578460.5 46 627165.0 47 652488.0 48 716389.0 49 754967.0 50 794390.0 51 833813.0 52 886186.0 53 989873.5 54 1041188.0 55 1069061.5 56 1096935.0 57 1041772.0 58 907337.5 59 828066.0 60 736742.5 61 645419.0 62 572815.5 63 500212.0 64 432702.0 65 321325.5 66 277459.0 67 238974.5 68 200490.0 69 160618.0 70 97996.0 71 75246.0 72 58875.5 73 42505.0 74 32005.0 75 17115.5 76 12726.0 77 8620.5 78 4515.0 79 3318.0 80 2121.0 81 1468.5 82 561.5 83 307.0 84 222.0 85 137.0 86 96.5 87 36.5 88 17.0 89 8.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 1.3146623E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.120345683321109 #Duplication Level Percentage of deduplicated Percentage of total 1 75.94760354699419 6.926683981684115 2 8.206402861580298 1.4969046182841572 3 3.717931571460852 1.0172646347596874 4 2.120707538670547 0.7736634338360184 5 1.297923165722737 0.5918753970890916 6 0.8053384196444416 0.4406978867530097 7 0.5614746575370813 0.3584590078413762 8 0.3921970427927849 0.2861578084997184 9 0.28307265334089704 0.23235484067675127 >10 2.1806671396951733 4.493392995331239 >50 1.066903454849966 7.304574032616834 >100 3.216223650933445 63.46720223581854 >500 0.1914018087272181 11.168406945676226 >1k 0.012068095772169324 1.403300578595101 >5k 8.439227812691721E-5 0.039061602538163535 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 5.248496134710792E-4 0.0 0.0 0.0 0.0 12 0.0019320550988645524 0.0 0.0 0.0 0.0 13 0.003757618971807437 0.0 0.0 0.0 0.0 14 0.014292643821915332 0.0 0.0 0.0 0.0 15 0.024249573445591314 0.0 0.0 0.0 0.0 16 0.028828696160223048 0.0 0.0 0.0 0.0 17 0.033407818874854785 0.0 0.0 0.0 0.0 18 0.0387323801709382 0.0 0.0 0.0 0.0 19 0.04514467327465008 1.5213032274524036E-5 0.0 0.0 0.0 20 0.05300220444444174 1.5213032274524036E-5 0.0 0.0 0.0 21 0.060661966194664595 1.5213032274524036E-5 0.0 0.0 0.0 22 0.06932578807500603 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 23 0.07871222898838735 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 24 0.0872163140298463 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 25 0.09637455945910976 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 26 0.10661293017986444 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 27 0.1161362883837165 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 28 0.1270440325245502 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 29 0.13875806737593374 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 30 0.15210750319682856 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 31 0.16518310443678197 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 32 0.17658527212653774 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 33 0.18642049749201753 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 34 0.19570805369561445 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 35 0.204607677576211 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 36 0.21375070997319995 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 37 0.22331210075773833 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 38 0.23488161180251385 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 39 0.24869504510778168 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 40 0.26664642319172005 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 41 0.28192791411147944 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 42 0.294775319867315 1.5213032274524036E-5 0.0 7.606516137262018E-6 0.0 43 0.30604817678273727 1.5213032274524036E-5 0.0 7.606516137262018E-6 7.606516137262018E-6 44 0.3165299560198844 1.5213032274524036E-5 0.0 7.606516137262018E-6 7.606516137262018E-6 45 0.32714865254750214 1.5213032274524036E-5 0.0 7.606516137262018E-6 7.606516137262018E-6 46 0.3382769856563165 1.5213032274524036E-5 0.0 7.606516137262018E-6 7.606516137262018E-6 47 0.34897174734530684 1.5213032274524036E-5 0.0 7.606516137262018E-6 7.606516137262018E-6 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGTG 1361420 0.0 50.86975 5 ATTGTGG 1354300 0.0 50.84094 6 TTGTGGG 1315155 0.0 50.772045 7 ATATTGT 298095 0.0 50.744667 4 TTATTGT 540590 0.0 50.712704 4 GTATTGT 282865 0.0 50.583885 4 GTTATTG 110855 0.0 50.468452 3 TGTGGGG 698635 0.0 50.41879 8 TCTATTG 105440 0.0 50.31331 3 TTTATTG 205280 0.0 50.26325 3 TATATTG 112475 0.0 50.22454 3 CTATTGT 255420 0.0 50.219482 4 CGTATTG 57225 0.0 50.12888 3 AATATTG 76200 0.0 50.05092 3 ACGTATT 9470 0.0 50.033794 2 CTTATTG 115845 0.0 50.001038 3 TGTATTG 101935 0.0 49.901165 3 CATATTG 59150 0.0 49.886307 3 GTGGGGG 255095 0.0 49.874165 9 CGGTATT 12240 0.0 49.644196 2 >>END_MODULE