##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527924_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3738432 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.804535430897232 33.0 31.0 34.0 30.0 34.0 2 32.31480337210895 34.0 31.0 34.0 30.0 34.0 3 32.43449686927568 34.0 31.0 34.0 30.0 34.0 4 36.03678360339308 37.0 35.0 37.0 35.0 37.0 5 35.986979835396234 37.0 35.0 37.0 35.0 37.0 6 36.0146160208344 37.0 35.0 37.0 35.0 37.0 7 36.00962756578159 37.0 35.0 37.0 35.0 37.0 8 35.973470428243715 37.0 35.0 37.0 35.0 37.0 9 37.5489550164347 39.0 37.0 39.0 35.0 39.0 10 37.890720762073514 39.0 38.0 39.0 35.0 39.0 11 38.209644845753516 39.0 39.0 39.0 37.0 39.0 12 38.1441922709842 39.0 39.0 39.0 37.0 39.0 13 38.108361205981545 39.0 39.0 39.0 37.0 39.0 14 38.70564851788129 40.0 39.0 40.0 36.0 40.0 15 38.14268334959684 40.0 38.0 40.0 34.0 40.0 16 37.604712349990585 40.0 37.0 40.0 33.0 40.0 17 37.651970398284625 40.0 37.0 40.0 33.0 40.0 18 37.335701170972214 40.0 36.0 40.0 32.0 40.0 19 37.72511389801927 40.0 37.0 40.0 33.0 40.0 20 37.79417467002209 40.0 37.0 40.0 33.0 40.0 21 37.67298616104292 40.0 37.0 40.0 33.0 40.0 22 37.767471228579254 40.0 37.0 40.0 33.0 40.0 23 37.69803757297177 40.0 37.0 40.0 33.0 40.0 24 37.65607158295243 40.0 37.0 40.0 33.0 40.0 25 37.840042563299264 40.0 37.0 40.0 33.0 40.0 26 37.81660519704518 40.0 38.0 40.0 33.0 40.0 27 37.73841252161334 40.0 37.0 40.0 33.0 40.0 28 37.68922853217606 40.0 37.0 40.0 33.0 40.0 29 37.66017597752213 40.0 37.0 40.0 33.0 40.0 30 37.54631406964203 40.0 37.0 40.0 33.0 40.0 31 37.47730920343074 40.0 36.0 40.0 33.0 40.0 32 37.35165866331125 40.0 36.0 40.0 33.0 40.0 33 37.26765553044699 40.0 36.0 40.0 33.0 40.0 34 37.17409304221663 40.0 36.0 40.0 32.0 40.0 35 37.119650163491 40.0 36.0 40.0 32.0 40.0 36 37.00970995326383 40.0 35.0 40.0 32.0 40.0 37 36.881144019738755 39.0 35.0 40.0 32.0 40.0 38 36.71504978557855 39.0 35.0 40.0 31.0 40.0 39 36.56316257725164 39.0 35.0 40.0 31.0 40.0 40 36.37599801200075 39.0 35.0 40.0 31.0 40.0 41 36.16737872990601 39.0 35.0 40.0 30.0 40.0 42 35.89580069933063 38.0 35.0 40.0 30.0 40.0 43 35.588141498895794 38.0 35.0 40.0 29.0 40.0 44 35.327661971650144 38.0 35.0 40.0 28.0 40.0 45 35.09482344469553 37.0 35.0 40.0 27.0 40.0 46 34.885542655316456 37.0 34.0 40.0 27.0 40.0 47 34.699761022803145 37.0 34.0 40.0 26.0 40.0 48 34.47731615821821 36.0 34.0 40.0 25.0 40.0 49 34.27645601150429 36.0 34.0 40.0 24.0 40.0 50 34.05751341738996 36.0 33.0 40.0 24.0 40.0 51 33.84089024489412 35.0 33.0 39.0 23.0 40.0 52 33.16042367495249 35.0 33.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 6.0 14 11.0 15 17.0 16 54.0 17 144.0 18 391.0 19 892.0 20 1978.0 21 3550.0 22 5881.0 23 9057.0 24 13478.0 25 19664.0 26 27298.0 27 36752.0 28 49068.0 29 63378.0 30 79573.0 31 94187.0 32 107873.0 33 131074.0 34 178833.0 35 304114.0 36 321306.0 37 609302.0 38 1145366.0 39 535180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.649648836731547 20.69450507592488 37.085976152568776 15.569869934774793 2 19.33235645318679 22.048361452074026 38.41848668104703 20.20079541369216 3 23.705366314005445 23.839245972643074 32.11632577508431 20.339061938267168 4 26.06047134199579 27.7071242702823 36.398682656258025 9.833721731463886 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.08750513584305 0.6222127351788129 0.12871706640645061 0.1615650625716878 12 99.00626786845395 0.6240316795918717 0.22587009740982317 0.14383035454436513 13 96.59210064540427 2.4440995583174976 0.39187552428397787 0.5719242719942478 14 53.50938575317138 33.222270727406574 5.504420034923733 7.763923484498314 15 38.04116271206752 27.040133403523186 15.930769905671681 18.98793397873761 16 27.231871544005614 29.87875665519662 22.8082789789944 20.081092821803363 17 30.892122686730694 18.511290294968585 26.19156908564874 24.40501793265198 18 20.4188280006163 19.609558231900433 36.368937565268006 23.60267620221526 19 23.88597679454916 21.39939953435023 25.60926613082704 29.10535754027357 20 27.570863934398165 19.650965966480065 25.22857176484687 27.549598334274904 21 29.64076917809392 22.711928423467377 20.933428774416655 26.71387362402205 22 27.940805128995255 23.741076472702993 21.390304812284935 26.927813586016814 23 23.336842826083235 20.39063436221389 20.417062554568332 35.85546025713454 24 24.550667231609403 21.70107681509253 28.447595141492478 25.300660811805592 25 26.76675675791348 18.299998502045778 20.15936092992998 34.77388381011076 26 27.47582408881585 20.764079699724377 16.52297005803503 35.237126153424754 27 27.415718675637272 32.29707000154075 17.790373076198794 22.49683824662318 28 27.277719642887714 22.550764598633865 27.27309203430743 22.89842372417099 29 37.42454055604061 20.812843459503878 17.525582918186018 24.237033066269493 30 38.41720272028486 20.654461549655043 17.03452142502525 23.893814305034837 31 34.92568542105353 20.71071508054714 18.373558754044474 25.990040744354854 32 31.32037709927585 27.54866211288583 17.13905723041104 23.991903557427285 33 28.79894565422081 28.663701787273382 18.436900818310992 24.10045174019482 34 25.977495377741256 31.00620795028504 18.58246986972078 24.433826802252923 35 28.626092436615135 29.02187334155068 17.757257588208105 24.594776633626076 36 28.283114418023388 28.115691284474348 19.90976430760276 23.69142998989951 37 28.016772807423006 29.631299967472994 19.878762005033128 22.473165220070875 38 27.379714275931725 29.546371312892678 20.8151171400202 22.25879727115539 39 28.777733552462635 30.391377989488642 19.49317253864722 21.337715919401504 40 27.822707488059166 31.202948187903377 17.974621445568623 22.999722878468834 41 27.626528983274273 29.752687757862116 17.840046308184824 24.780736950678786 42 29.41990117782001 29.268688048893228 18.509712093198434 22.801698680088336 43 28.016665810692825 29.661419547018642 17.151656095389725 25.170258546898804 44 27.595446433157 29.34834711451218 17.647933679146767 25.408272773184056 45 26.19015137897386 31.286806875181895 18.15975253796244 24.36328920788181 46 25.693365560748465 28.89668716724017 21.5245589594782 23.885388312533166 47 28.758099652474623 26.92297198397617 20.65702947117936 23.661898892369848 48 28.49783010631195 27.15194498656121 20.31271399346036 24.03751091366648 49 27.607296321024428 27.73681586290723 20.372177426257853 24.283710389810487 50 27.31613146902231 28.899388834677215 19.97356110797254 23.81091858832794 51 26.016361939979117 29.98628836902744 20.073897291698767 23.92345239929468 52 27.68296975844418 29.521628319038566 19.98682870251485 22.808573220002394 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.5 6 3.0 7 12.5 8 22.0 9 27.0 10 32.0 11 198.0 12 364.0 13 683.0 14 2009.0 15 3016.0 16 3561.0 17 4106.0 18 4586.5 19 5067.0 20 5918.5 21 6770.0 22 8665.0 23 10560.0 24 13355.5 25 16151.0 26 20617.5 27 25084.0 28 31064.0 29 37044.0 30 46726.5 31 56409.0 32 68596.0 33 80783.0 34 84947.0 35 89111.0 36 85848.0 37 82585.0 38 76450.0 39 66533.0 40 62751.0 41 67967.0 42 73183.0 43 78624.5 44 84066.0 45 93940.5 46 103815.0 47 115980.0 48 128145.0 49 152975.5 50 177806.0 51 199181.0 52 220556.0 53 238746.5 54 256937.0 55 265505.5 56 274074.0 57 293887.0 58 313700.0 59 310093.0 60 306486.0 61 309857.5 62 313229.0 63 287220.0 64 229309.0 65 197407.0 66 169040.0 67 140673.0 68 127026.5 69 113380.0 70 102832.5 71 92285.0 72 77453.0 73 62621.0 74 50198.5 75 37776.0 76 27936.5 77 18097.0 78 13773.0 79 9449.0 80 5612.0 81 1775.0 82 1055.0 83 335.0 84 283.0 85 231.0 86 123.0 87 15.0 88 10.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3738432.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.991651139897245 #Duplication Level Percentage of deduplicated Percentage of total 1 76.36555226110258 12.212112708651437 2 8.134391664196833 2.6016470745824787 3 3.6559438491387417 1.7539373586743967 4 2.3552747565015832 1.50658928978319 5 1.5490945972518255 1.2386290190975413 6 1.1555992566026267 1.1087964101468284 7 0.8625773856264328 0.965582564247177 8 0.6917959838813751 0.8850368027370341 9 0.5409260468068636 0.7785270569717181 >10 3.056207875699446 8.546934298423366 >50 0.2829201657345276 3.292349351932321 >100 1.195994394378233 47.52087787209449 >500 0.13939032234787652 14.687272788657285 >1k 0.014331440730993423 2.9017074040007507 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.005884820159895913 0.0 0.0 0.0 0.0 12 0.009335464708198517 0.0 0.0 0.0 0.0 13 0.02420801020320819 0.0 0.0 0.0 0.0 14 0.15886339513464467 0.0 0.0 0.0 0.0 15 0.24748343690616814 0.0 0.0 0.0 0.0 16 0.31965273141252804 0.0 0.0 0.0 0.0 17 0.3742745621693801 0.0 0.0 0.0 0.0 18 0.4500549963193125 0.0 0.0 0.0 0.0 19 0.5111501292520501 0.0 0.0 0.0 0.0 20 0.5624550613733245 0.0 0.0 0.0 0.0 21 0.6303177374899424 0.0 0.0 0.0 0.0 22 0.671136990053584 0.0 0.0 0.0 0.0 23 0.714310170681184 0.0 0.0 0.0 8.024754763494428E-5 24 0.7793641826305788 0.0 0.0 0.0 8.024754763494428E-5 25 0.8276464571242703 0.0 0.0 0.0 8.024754763494428E-5 26 0.8852909455087052 0.0 0.0 0.0 8.024754763494428E-5 27 0.9680796654854228 0.0 0.0 0.0 8.024754763494428E-5 28 1.0487017016759967 0.0 0.0 0.0 8.024754763494428E-5 29 1.1066136818858816 0.0 0.0 0.0 8.024754763494428E-5 30 1.1731923972403404 0.0 0.0 0.0 8.024754763494428E-5 31 1.2368287025148512 0.0 0.0 0.0 8.024754763494428E-5 32 1.3780911355348981 0.0 0.0 0.0 8.024754763494428E-5 33 1.4744149418793762 0.0 0.0 0.0 8.024754763494428E-5 34 1.5737346566688921 0.0 0.0 0.0 8.024754763494428E-5 35 1.6430150394603942 0.0 0.0 0.0 8.024754763494428E-5 36 1.7145423535856745 0.0 0.0 0.0 8.024754763494428E-5 37 1.7845717134884358 0.0 0.0 0.0 8.024754763494428E-5 38 1.8551895554071867 0.0 0.0 0.0 8.024754763494428E-5 39 1.9303280091760395 0.0 0.0 0.0 8.024754763494428E-5 40 2.013170227517847 0.0 0.0 0.0 8.024754763494428E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGTA 55 1.8189894E-12 46.0 28 CGAACTA 80 0.0 46.0 16 TTTACGG 120 0.0 46.0 29 GCGAATA 30 1.862536E-6 46.0 36 ACGTTAC 20 6.3132896E-4 46.0 17 CTATAGT 25 3.4186436E-5 46.0 17 CTATACG 20 6.3132896E-4 46.0 24 TAGCGAA 25 3.4186436E-5 46.0 40 ATAGCGG 100 0.0 46.0 20 CGTCTAC 40 5.6170393E-9 46.0 32 CACGACG 45 3.110472E-10 46.0 38 ATCGTTC 55 1.8189894E-12 46.0 40 ACGATTA 20 6.3132896E-4 46.0 40 TACGCTA 20 6.3132896E-4 46.0 24 CTAACGT 20 6.3132896E-4 46.0 23 TACGCGC 105 0.0 46.0 43 CGTAGTG 20 6.3132896E-4 46.0 34 CTACGTC 40 5.6170393E-9 46.0 38 GTACTAG 40 5.6170393E-9 46.0 23 TACCTAG 25 3.4186436E-5 46.0 31 >>END_MODULE