##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527922_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3801710 Sequences flagged as poor quality 0 Sequence length 59 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39159299367916 31.0 31.0 34.0 30.0 34.0 2 31.89298315757909 31.0 31.0 34.0 30.0 34.0 3 32.088652737846914 33.0 31.0 34.0 30.0 34.0 4 35.815727396355854 37.0 35.0 37.0 35.0 37.0 5 35.668612808446724 37.0 35.0 37.0 33.0 37.0 6 35.73435927516828 37.0 35.0 37.0 33.0 37.0 7 35.72935889376097 37.0 35.0 37.0 33.0 37.0 8 35.704440896333494 37.0 35.0 37.0 33.0 37.0 9 37.21659595287384 39.0 37.0 39.0 33.0 39.0 10 37.58061793245671 39.0 37.0 39.0 35.0 39.0 11 37.94429348898259 39.0 37.0 39.0 35.0 39.0 12 37.89363418040829 39.0 37.0 39.0 35.0 39.0 13 37.868391855244084 39.0 38.0 39.0 35.0 39.0 14 38.230131440851615 40.0 38.0 40.0 34.0 40.0 15 37.64967422554587 40.0 37.0 40.0 33.0 40.0 16 37.16555260659019 39.0 36.0 40.0 32.0 40.0 17 37.13995649326224 39.0 36.0 40.0 32.0 40.0 18 36.7619823710909 39.0 36.0 40.0 31.0 40.0 19 37.138330908985694 39.0 36.0 40.0 32.0 40.0 20 37.28997398539079 39.0 36.0 40.0 32.0 40.0 21 37.318962782537334 40.0 36.0 40.0 32.0 40.0 22 37.313980813896904 40.0 36.0 40.0 32.0 40.0 23 37.269157826346564 40.0 36.0 40.0 32.0 40.0 24 37.245521094454865 40.0 36.0 40.0 32.0 40.0 25 37.22509528606864 40.0 36.0 40.0 32.0 40.0 26 37.06130320303232 40.0 36.0 40.0 31.0 40.0 27 36.89204226519119 39.0 36.0 40.0 31.0 40.0 28 36.86090127863514 39.0 36.0 40.0 31.0 40.0 29 36.79370125548766 39.0 35.0 40.0 31.0 40.0 30 36.66671603041789 39.0 35.0 40.0 31.0 40.0 31 36.6347567278935 39.0 35.0 40.0 30.0 40.0 32 36.428204939356235 39.0 35.0 40.0 30.0 40.0 33 36.271352628159434 39.0 35.0 40.0 30.0 40.0 34 36.19222034295093 39.0 35.0 40.0 30.0 40.0 35 36.10506929776337 39.0 35.0 40.0 30.0 40.0 36 35.8881782145403 38.0 35.0 40.0 29.0 40.0 37 35.764147712476756 38.0 35.0 40.0 29.0 40.0 38 35.59261516528089 38.0 35.0 40.0 28.0 40.0 39 35.417700718887026 38.0 34.0 40.0 27.0 40.0 40 35.18865957687462 38.0 34.0 40.0 26.0 40.0 41 34.99785017794624 38.0 34.0 40.0 26.0 40.0 42 34.75752648150438 37.0 34.0 40.0 25.0 40.0 43 34.408934926651426 37.0 33.0 40.0 24.0 40.0 44 34.15639856801282 37.0 33.0 40.0 24.0 40.0 45 33.877041910087826 36.0 33.0 40.0 23.0 40.0 46 33.59934108598499 36.0 33.0 39.0 23.0 40.0 47 33.42983157579089 35.0 33.0 39.0 22.0 40.0 48 33.162723353438324 35.0 32.0 39.0 20.0 40.0 49 33.01359940658283 35.0 32.0 39.0 20.0 40.0 50 32.74290516635935 35.0 32.0 39.0 20.0 40.0 51 32.52308776839896 35.0 31.0 38.0 20.0 40.0 52 32.26403039684774 35.0 31.0 38.0 18.0 40.0 53 31.97523535461674 35.0 31.0 38.0 18.0 40.0 54 31.682009148514748 35.0 30.0 38.0 16.0 40.0 55 31.407243319453613 35.0 30.0 37.0 15.0 40.0 56 31.06346170539047 35.0 29.0 37.0 13.0 40.0 57 30.757746119509378 34.0 29.0 37.0 11.0 39.0 58 30.36982226419164 34.0 28.0 36.0 10.0 39.0 59 29.739700818842046 34.0 27.0 36.0 10.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 3.0 14 20.0 15 58.0 16 233.0 17 681.0 18 1913.0 19 4037.0 20 7526.0 21 11929.0 22 18053.0 23 25500.0 24 35005.0 25 46575.0 26 59677.0 27 74119.0 28 87902.0 29 96902.0 30 108613.0 31 129006.0 32 157225.0 33 196687.0 34 264180.0 35 358945.0 36 434310.0 37 660302.0 38 841782.0 39 180521.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.758695429162138 21.146115826825294 36.51456844420011 15.580620299812454 2 19.00302758495519 22.589597838867245 38.20052029218431 20.206854283993255 3 23.57917884320477 24.071772965323497 31.995286331677057 20.353761859794673 4 26.062955880380144 27.944845871989184 36.16980253622712 9.822395711403553 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 0.0 0.0 0.0 100.0 8 0.0 0.0 0.0 100.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.0767575643592 0.6261918978564909 0.12812655357720604 0.1689239842071068 12 98.99973959086832 0.6212204507971413 0.22129515402279498 0.15774480431174392 13 96.56415139503012 2.46628490863322 0.38527399512324717 0.5842897012134013 14 53.19624589987137 33.495663793398236 5.553343100867767 7.754747205862625 15 38.135733656696594 27.18979090988003 15.904132614007906 18.770342819415472 16 27.251421071044348 30.183943541195934 22.61248227771187 19.952153110047846 17 31.078856619784258 18.54397100252255 26.03917710714389 24.337995270549307 18 20.392086718871244 19.720231159136283 36.40411814683392 23.483563975158546 19 23.85473905163729 21.502455473984075 25.610054422878125 29.03275105150051 20 27.55917731757551 19.706211152349866 25.278966570306522 27.455644959768104 21 29.33348414266212 22.93020772231443 21.032298623514155 26.704009511509298 22 27.849862298807643 23.897509278719316 21.471548329567483 26.78108009290556 23 23.15463304670793 20.448219353922315 20.51345315660584 35.88369444276391 24 24.405990988265806 21.790431148088622 28.655341938233057 25.14823592541251 25 26.591481201880207 18.330409210592073 20.167266835187323 34.91084275234039 26 27.228036857098516 20.856325179984797 16.531245150208722 35.384392812707965 27 27.284827090966964 32.5752095767431 17.88581980214167 22.254143530148276 28 27.163644780901226 22.631184388077997 27.509252415360457 22.695918415660323 29 37.613494979890625 20.86342724721244 17.444044916629622 24.07903285626731 30 38.55144132508792 20.7820165136215 16.98869719152697 23.677844969763605 31 35.000802270557195 20.861664882381874 18.30197463772881 25.835558209332117 32 31.151139881790037 27.97022918633983 17.056298349953046 23.822332581917085 33 28.750693766752327 29.0908564830037 18.28713920840885 23.871310541835122 34 25.84831562638918 31.40626191897857 18.50756633199271 24.23785612263955 35 28.449566116300296 29.406951082539173 17.70106083841219 24.44242196274834 36 28.023784034026793 28.466979332984366 19.97761533625658 23.53162129673226 37 27.725497210465814 30.07596581538308 19.834390313832458 22.364146660318646 38 27.04148922458578 29.957861067782655 20.85587801278898 22.144771694842582 39 28.38304341993471 30.89375570466974 19.387091598254468 21.336109277141077 40 27.56670024804627 31.793114151263513 17.884899163797343 22.75528643689287 41 27.37281381273164 30.1590336979938 17.727338487154466 24.7408140021201 42 29.114267000902228 29.774390997735228 18.46221831754658 22.649123683815965 43 27.719394693440584 30.12460182391608 17.071738770184997 25.084264712458342 44 27.314287517985324 29.819265541032852 17.448385068824294 25.418061872157526 45 25.898819215563524 31.904037919778204 18.07975884536169 24.11738401929658 46 25.45399307153886 29.397455355616287 21.47686172801187 23.671689844832983 47 28.543629051137515 27.419292897143656 20.444852447977357 23.592225603741472 48 28.37202206375552 27.66357770582185 20.045163886777264 23.91923634364536 49 27.443071670379908 28.230191150824236 20.194044259030804 24.132692919765052 50 27.073632654779033 29.46973861762207 19.76418506408958 23.692443663509316 51 25.82017039700556 30.436856046358084 19.957019341296416 23.785954215339938 52 27.38457167958629 30.03324819620644 19.878160091116893 22.704020033090373 53 25.968892945542926 29.70615854444447 19.698109534919812 24.626838975092788 54 25.185561234286673 29.395166911731824 20.314937225616895 25.104334628364604 55 25.179485021214138 29.86774372584968 20.609278456273625 24.343492796662556 56 25.252583705753462 29.043325240483885 20.89015206315053 24.81393899061212 57 26.73802052234389 27.502729035092106 20.121839908883107 25.6374105336809 58 26.319472027061508 27.743489114109178 20.805584855236198 25.131454003593117 59 26.76540293709936 27.448648108351243 20.973614505051675 24.812334449497726 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.5 5 1.0 6 11.0 7 21.0 8 18.5 9 121.5 10 227.0 11 481.0 12 735.0 13 1292.5 14 2140.0 15 2430.0 16 2377.0 17 2324.0 18 2355.0 19 2639.5 20 2893.0 21 3718.5 22 4544.0 23 6239.0 24 7934.0 25 12197.5 26 25181.0 27 33901.0 28 44849.5 29 55798.0 30 64908.5 31 76705.0 32 79391.0 33 76966.0 34 74541.0 35 69238.0 36 64077.5 37 64220.0 38 64695.5 39 65171.0 40 69066.0 41 72961.0 42 76786.5 43 83514.5 44 86417.0 45 90734.0 46 95051.0 47 107316.0 48 124247.0 49 128913.0 50 153215.5 51 177518.0 52 186555.0 53 208737.5 54 221883.0 55 230483.5 56 239084.0 57 255111.5 58 282386.0 59 293633.0 60 287050.0 61 280467.0 62 253543.0 63 226619.0 64 213279.5 65 175477.5 66 151015.0 67 127047.0 68 103079.0 69 101220.5 70 88476.0 71 77590.0 72 67882.0 73 58174.0 74 48816.5 75 27748.0 76 16037.0 77 11805.0 78 7573.0 79 6137.0 80 4701.0 81 2938.0 82 1121.5 83 1068.0 84 621.0 85 174.0 86 128.0 87 45.5 88 9.0 89 5.5 90 2.0 91 1.5 92 0.5 93 0.0 94 0.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 3801710.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.212769036076764 #Duplication Level Percentage of deduplicated Percentage of total 1 83.281277873768 18.49907790439339 2 6.628756122519778 2.9448605749202317 3 2.817736994927217 1.8776922321818181 4 1.6558468505115491 1.4712377459811266 5 1.0528952935265692 1.1693859987138966 6 0.6953079350280946 0.926682874183832 7 0.48893332918744214 0.760239418069652 8 0.360467740842591 0.6405589337834279 9 0.25439104589714834 0.5085656592623423 >10 1.628117137709754 6.523064890694662 >50 0.1959574340739536 3.2284067675779013 >100 0.8393082091647694 45.52257769570997 >500 0.09172192099789124 13.350761530041295 >1k 0.009282111845325876 2.57688777448646 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.006444468410268011 0.0 0.0 0.0 0.0 12 0.009863982260614303 0.0 0.0 0.0 0.0 13 0.024015508810508956 0.0 0.0 0.0 0.0 14 0.15274705329969934 0.0 0.0 0.0 0.0 15 0.2377088205044572 0.0 0.0 0.0 0.0 16 0.3054678026467037 0.0 0.0 0.0 0.0 17 0.35704985388154276 0.0 0.0 0.0 0.0 18 0.4299644107520037 0.0 0.0 0.0 0.0 19 0.48854331340370516 0.0 0.0 0.0 0.0 20 0.536679546835503 0.0 0.0 0.0 0.0 21 0.5994670819183999 0.0 0.0 0.0 0.0 22 0.638107588427313 0.0 0.0 0.0 0.0 23 0.6800097850704026 0.0 0.0 0.0 5.260790538994295E-5 24 0.7405614841742268 0.0 0.0 0.0 5.260790538994295E-5 25 0.7847784286544739 0.0 0.0 0.0 5.260790538994295E-5 26 0.8377545893821464 0.0 0.0 0.0 5.260790538994295E-5 27 0.9154827695957871 0.0 0.0 0.0 5.260790538994295E-5 28 0.9876345118380939 0.0 0.0 0.0 5.260790538994295E-5 29 1.041820654389735 0.0 0.0 0.0 5.260790538994295E-5 30 1.10200409815583 0.0 0.0 0.0 5.260790538994295E-5 31 1.161819286584195 0.0 0.0 0.0 5.260790538994295E-5 32 1.2938388251602568 0.0 0.0 0.0 5.260790538994295E-5 33 1.3821411943572761 0.0 0.0 0.0 5.260790538994295E-5 34 1.4720218007159935 0.0 0.0 0.0 5.260790538994295E-5 35 1.539964910527105 0.0 0.0 0.0 5.260790538994295E-5 36 1.6069347740885023 0.0 0.0 0.0 5.260790538994295E-5 37 1.6755091787642928 0.0 0.0 0.0 5.260790538994295E-5 38 1.7427683858053349 0.0 0.0 0.0 5.260790538994295E-5 39 1.8134734106494184 0.0 0.0 0.0 5.260790538994295E-5 40 1.8955417430577293 0.0 0.0 0.0 5.260790538994295E-5 41 1.9838967201601385 0.0 0.0 0.0 5.260790538994295E-5 42 2.0815106886111776 0.0 0.0 0.0 5.260790538994295E-5 43 2.1811763653724245 0.0 0.0 0.0 5.260790538994295E-5 44 2.2871023828750747 0.0 0.0 0.0 5.260790538994295E-5 45 2.4007091545646566 0.0 0.0 0.0 5.260790538994295E-5 46 2.51252725747098 0.0 0.0 0.0 5.260790538994295E-5 47 2.6150074571705892 0.0 0.0 0.0 5.260790538994295E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATTA 20 3.1391668E-4 53.000004 47 CGTTAGT 20 3.1391668E-4 53.000004 18 TACTAAC 20 3.1391668E-4 53.000004 50 CACGTAA 20 3.1391668E-4 53.000004 50 CGTTTAG 20 3.1391668E-4 53.000004 15 ACTATCG 15 0.0066974503 53.0 36 GCGAATA 15 0.0066974503 53.0 36 TTCGTTA 30 7.0148053E-7 53.0 19 TACGGGT 25 1.4793839E-5 53.0 37 CTTATAC 30 7.0148053E-7 53.0 46 TACGATT 30 7.0148053E-7 53.0 29 TATTCGC 25 1.4793839E-5 53.0 15 CGATCAA 145 0.0 53.0 41 GCGTATA 105 0.0 53.0 24 GCGTAAT 30 7.0148053E-7 53.0 14 TACGTAA 35 3.3447577E-8 53.0 18 ACGGTTA 25 1.4793839E-5 53.0 26 CAATGCG 270 0.0 51.037033 44 CGATACA 235 0.0 50.74468 50 AACGATA 230 0.0 50.695652 48 >>END_MODULE