##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527915_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2502111 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.653313142382572 31.0 31.0 34.0 30.0 34.0 2 32.281429161216266 33.0 31.0 34.0 30.0 34.0 3 32.469921997865 34.0 31.0 34.0 31.0 34.0 4 36.01821581856281 37.0 35.0 37.0 35.0 37.0 5 36.05723207323736 37.0 35.0 37.0 35.0 37.0 6 36.12387659860014 37.0 36.0 37.0 35.0 37.0 7 36.05120795999858 37.0 35.0 37.0 35.0 37.0 8 35.072894048265645 35.0 35.0 37.0 33.0 37.0 9 37.82268932113723 39.0 37.0 39.0 35.0 39.0 10 37.52673282680105 39.0 37.0 39.0 35.0 39.0 11 38.09997558061973 39.0 38.0 39.0 37.0 39.0 12 38.145101076650874 39.0 39.0 39.0 37.0 39.0 13 38.08137808434558 39.0 39.0 39.0 37.0 39.0 14 38.596082667795315 40.0 39.0 40.0 36.0 40.0 15 36.91512886518624 39.0 35.0 40.0 33.0 40.0 16 36.61318582588862 39.0 35.0 40.0 31.0 40.0 17 36.617369493199945 39.0 35.0 40.0 31.0 40.0 18 36.82078253123063 39.0 35.0 40.0 31.0 40.0 19 37.03933038941918 39.0 35.0 40.0 32.0 40.0 20 37.12937155865587 39.0 35.0 40.0 33.0 40.0 21 36.95579732473899 39.0 35.0 40.0 32.0 40.0 22 36.987974953948886 39.0 35.0 40.0 32.0 40.0 23 36.93877529813825 39.0 35.0 40.0 32.0 40.0 24 36.89343478366867 39.0 35.0 40.0 32.0 40.0 25 36.96458270636275 39.0 35.0 40.0 32.0 40.0 26 36.95212562512215 39.0 35.0 40.0 32.0 40.0 27 36.83666791761037 39.0 35.0 40.0 32.0 40.0 28 36.73988084461481 39.0 35.0 40.0 32.0 40.0 29 36.730488775278154 39.0 35.0 40.0 32.0 40.0 30 36.64943082061507 39.0 35.0 40.0 32.0 40.0 31 36.54670596148612 39.0 35.0 40.0 32.0 40.0 32 36.44705250886152 39.0 35.0 40.0 31.0 40.0 33 36.31982354100198 38.0 35.0 40.0 31.0 40.0 34 36.21327111387145 38.0 35.0 40.0 31.0 40.0 35 36.04738278997215 38.0 35.0 40.0 31.0 40.0 36 35.89671441434852 38.0 35.0 40.0 31.0 40.0 37 35.71647740647797 37.0 35.0 40.0 30.0 40.0 38 35.46760515420779 37.0 35.0 40.0 30.0 40.0 39 35.22472624116196 37.0 35.0 40.0 29.0 40.0 40 34.97176264362373 36.0 34.0 40.0 28.0 40.0 41 34.69367945706645 36.0 34.0 40.0 27.0 40.0 42 34.42719487664616 35.0 34.0 40.0 26.0 40.0 43 34.17765358930919 35.0 34.0 39.0 25.0 40.0 44 33.926763840612985 35.0 33.0 39.0 24.0 40.0 45 33.7217545504576 35.0 33.0 39.0 23.0 40.0 46 33.54632828040003 35.0 33.0 39.0 23.0 40.0 47 33.375807468173875 35.0 33.0 38.0 23.0 40.0 48 33.19134762606455 35.0 33.0 38.0 23.0 40.0 49 33.04050379859247 35.0 33.0 37.0 23.0 40.0 50 32.84497370420417 35.0 33.0 37.0 22.0 40.0 51 32.66330710348182 35.0 33.0 37.0 22.0 40.0 52 32.040435056638174 35.0 32.0 36.0 20.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 12.0 15 15.0 16 94.0 17 277.0 18 729.0 19 1423.0 20 2654.0 21 4433.0 22 6814.0 23 10047.0 24 14684.0 25 20078.0 26 27105.0 27 34620.0 28 44054.0 29 55483.0 30 65513.0 31 74010.0 32 84475.0 33 107939.0 34 186766.0 35 325933.0 36 235781.0 37 433607.0 38 563317.0 39 202242.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.689889857004747 18.73665876533855 34.94900905675248 16.62444232090423 2 24.748302533340848 20.827733062202277 34.34515894778449 20.078805456672384 3 21.373312375030523 22.566025248280354 36.477838113496965 19.582824263192162 4 17.22237742450275 21.26104717176816 36.20790604413633 25.308669359592763 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.54686262919591 0.34311027768152574 0.04508193281593023 0.06494516030663706 12 99.42924194809902 0.3531817733106165 0.07305830956340466 0.14451796902695363 13 95.984550645435 2.1053022827524437 0.9154669796823562 0.9946800921302053 14 56.65416122626055 27.55089602339784 5.9419426236485915 9.85300012669302 15 33.33673046479553 28.651047055866023 17.37792607921871 20.63429640011974 16 30.02017096763493 21.021769218072258 25.85964411650802 23.09841569778479 17 22.68816211590933 21.490013832319992 28.24546952553264 27.576354526238045 18 22.75522548759827 22.320752356709995 28.967220079364985 25.956802076326753 19 25.444274854313022 21.828607923469423 26.276891792570357 26.450225429647205 20 27.465687973075536 22.0991394866175 24.794503521226677 25.640669019080285 21 30.107377330582057 22.830481941048976 20.751197688671684 26.310943039697282 22 30.22639683051631 23.353959916246723 20.80487236577434 25.61477088746263 23 27.839812062694264 23.453755648730212 20.049350328582545 28.65708195999298 24 28.746846163099875 25.312665984842397 19.397780514133867 26.54270733792386 25 31.039989832585363 21.496648230234392 22.73140560111042 24.73195633606982 26 31.788717606852774 21.774413685084316 20.877371147802794 25.559497560260112 27 30.912937115899336 23.753142846180687 20.11845197914881 25.215468058771172 28 30.34641548676298 24.27570159757101 20.034083220128924 25.34379969553709 29 31.018567921247296 23.941583726701175 19.01334513137107 26.026503220680457 30 30.733448675938035 24.623727724309592 18.3373159703946 26.30550762935777 31 29.881887733997413 24.47829053147522 19.835450945221854 25.80437078930551 32 30.44529199543905 24.73399461494714 18.904357160813408 25.916356228800403 33 28.725304353004322 26.35146881972862 18.740695356840682 26.182531470426373 34 28.642174547811827 26.05831635766759 18.842689233211477 26.45681986130911 35 30.275395456076886 26.22849266079722 18.902598645703566 24.59351323742232 36 30.83636177611625 25.863121180475208 18.988805852338288 24.31171119107026 37 31.380941932632084 26.381723272868392 18.801404094382704 23.43593070011682 38 31.069884589452666 27.014548914896263 19.292189675038397 22.623376820612677 39 30.707630476825372 27.210023855856114 20.528665594771773 21.55368007254674 40 31.7895169319027 26.341397324099532 19.302620866939957 22.56646487705781 41 30.930841997017716 26.660367985273236 17.78002654558491 24.628763472124138 42 31.659506712531936 25.71540591124854 18.924220388304118 23.700866987915404 43 32.233182300865145 25.804730485577977 18.222452960719966 23.739634252836904 44 30.131996542119833 26.563929417999443 19.98316621444852 23.320907825432204 45 30.34261869277582 25.325575084398732 19.567357323476056 24.76444889934939 46 29.149186426981053 24.32853698337124 20.53605935148361 25.986217238164095 47 29.517395511230315 23.12431382940245 21.737964462807604 25.620326196559624 48 29.080524405192254 23.668494323393325 21.335943928946396 25.915037342468022 49 29.45736619998074 22.42658299332044 21.626458618342674 26.489592188356152 50 29.158658428822704 23.367868172115465 21.809743852291124 25.663729546770707 51 28.085844313062054 24.596710537622034 22.158329506564655 25.15911564275126 52 29.8598663288719 24.152565573629627 21.013736001320485 24.973832096177986 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 2.5 8 4.0 9 58.0 10 112.0 11 390.5 12 669.0 13 1224.5 14 2102.5 15 2425.0 16 3053.5 17 3682.0 18 3982.5 19 4283.0 20 5014.0 21 5745.0 22 7298.5 23 8852.0 24 11189.5 25 13527.0 26 16555.5 27 19584.0 28 22864.0 29 26144.0 30 29505.0 31 32866.0 32 34417.0 33 35968.0 34 37425.5 35 38883.0 36 38760.5 37 38638.0 38 38411.5 39 39985.5 40 41786.0 41 45058.5 42 48331.0 43 48958.5 44 49586.0 45 56967.0 46 64348.0 47 69958.5 48 75569.0 49 90023.0 50 104477.0 51 111003.5 52 117530.0 53 131531.0 54 145532.0 55 156184.5 56 166837.0 57 184326.0 58 201815.0 59 208217.5 60 214620.0 61 217015.0 62 219410.0 63 201232.0 64 177817.5 65 172581.0 66 150944.5 67 129308.0 68 112656.5 69 96005.0 70 91192.0 71 86379.0 72 69723.5 73 53068.0 74 41751.0 75 30434.0 76 24180.0 77 17926.0 78 13641.0 79 9356.0 80 5264.0 81 1172.0 82 1177.5 83 1183.0 84 690.5 85 198.0 86 189.0 87 180.0 88 129.0 89 39.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2502111.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.389742625293335 #Duplication Level Percentage of deduplicated Percentage of total 1 80.75306205921159 10.812627171771833 2 6.538116606200023 1.7508739722234927 3 2.8766247989076366 1.1555179706072833 4 1.7970049748318964 0.9624573643748328 5 1.2089771767366995 0.8093946618179088 6 0.823829939588612 0.6618522514861482 7 0.6311032087519369 0.5915216674629645 8 0.4476409210612272 0.4795037377247266 9 0.36968869065286397 0.44550327773911813 >10 2.131817904868628 5.2679495216622945 >50 0.4254003301470449 4.2771162142057815 >100 1.8258512789054426 56.953987432642684 >500 0.15403457815115174 13.065791782700508 >1k 0.01684753198528222 2.765902973580418 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0014387850898701137 0.0 0.0 0.0 0.0 12 0.006914161681875824 0.0 0.0 0.0 0.0 13 0.029535060594833722 0.0 0.0 0.0 0.0 14 0.0808916950526975 0.0 0.0 0.0 0.0 15 0.14703584293422634 0.0 0.0 0.0 0.0 16 0.19039922689281172 0.0 0.0 0.0 0.0 17 0.2155779659655387 0.0 0.0 0.0 0.0 18 0.25062836940487454 0.0 0.0 0.0 0.0 19 0.2809227887971397 0.0 0.0 0.0 0.0 20 0.3129757232992461 0.0 0.0 0.0 0.0 21 0.3422310201266051 0.0 0.0 0.0 0.0 22 0.385034876550241 0.0 0.0 0.0 0.0 23 0.4255206903290861 0.0 0.0 0.0 0.0 24 0.47304056454729626 0.0 0.0 0.0 0.0 25 0.5232381776827647 0.0 0.0 0.0 0.0 26 0.5775922810778579 0.0 0.0 0.0 0.0 27 0.6373817948124604 0.0 0.0 0.0 0.0 28 0.6965718147596169 0.0 0.0 0.0 0.0 29 0.7576002823216076 0.0 0.0 0.0 0.0 30 0.8287002455126891 0.0 0.0 0.0 0.0 31 0.8928860470218947 0.0 0.0 0.0 0.0 32 0.9484391379918796 0.0 0.0 0.0 0.0 33 1.0013944225495992 0.0 0.0 0.0 0.0 34 1.0484347017378526 0.0 0.0 0.0 0.0 35 1.0924375457363802 0.0 0.0 0.0 0.0 36 1.1357209971899729 0.0 0.0 0.0 0.0 37 1.174688093373955 0.0 0.0 0.0 0.0 38 1.2157334346877497 0.0 0.0 0.0 0.0 39 1.2589369536363495 0.0 0.0 0.0 0.0 40 1.3068564903795234 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAA 75 0.0 46.000004 25 TAACCGT 75 0.0 46.000004 19 TTAACCG 75 0.0 46.000004 32 ACGCGAA 25 3.418317E-5 46.0 42 TTTAGCG 25 3.418317E-5 46.0 39 AACGTAC 30 1.8622886E-6 46.0 40 ACTATAC 30 1.8622886E-6 46.0 21 ACAGTCG 30 1.8622886E-6 46.0 14 CGAACTG 25 3.418317E-5 46.0 21 CGAACCT 55 1.8189894E-12 46.0 26 TTAATCG 20 6.312886E-4 46.0 38 CGAAAGT 40 5.6152203E-9 46.0 35 CGAAAAC 25 3.418317E-5 46.0 30 ACCATAG 80 0.0 46.0 38 CTATAGT 50 1.6370905E-11 46.0 34 TAGCGAT 60 0.0 46.0 16 CCGGATA 80 0.0 46.0 24 ACCGATA 55 1.8189894E-12 46.0 32 ATAGCCG 20 6.312886E-4 46.0 27 CAACCGT 20 6.312886E-4 46.0 46 >>END_MODULE