##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527914_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2478909 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.617143267461614 31.0 31.0 34.0 30.0 34.0 2 32.131914886750586 33.0 31.0 34.0 30.0 34.0 3 32.40538115759796 34.0 31.0 34.0 30.0 34.0 4 35.98535000679735 37.0 35.0 37.0 35.0 37.0 5 36.04131817666562 37.0 35.0 37.0 35.0 37.0 6 36.10853443994919 37.0 35.0 37.0 35.0 37.0 7 36.05889647421507 37.0 35.0 37.0 35.0 37.0 8 35.03923742259195 35.0 35.0 37.0 33.0 37.0 9 37.8214218432383 39.0 37.0 39.0 35.0 39.0 10 37.52934819309624 39.0 37.0 39.0 35.0 39.0 11 38.09543149829219 39.0 38.0 39.0 37.0 39.0 12 38.13147719420116 39.0 39.0 39.0 37.0 39.0 13 38.09076573605566 39.0 39.0 39.0 37.0 39.0 14 38.62744174957612 40.0 39.0 40.0 36.0 40.0 15 36.94498265164231 39.0 35.0 40.0 33.0 40.0 16 36.6579914793161 39.0 35.0 40.0 31.0 40.0 17 36.68009515476365 39.0 35.0 40.0 31.0 40.0 18 36.8990390530673 39.0 35.0 40.0 32.0 40.0 19 37.10593652288164 39.0 35.0 40.0 33.0 40.0 20 37.17249806265579 39.0 35.0 40.0 33.0 40.0 21 37.188767719992946 39.0 35.0 40.0 33.0 40.0 22 37.123820600110776 39.0 35.0 40.0 33.0 40.0 23 37.04562369978083 39.0 35.0 40.0 32.0 40.0 24 37.00559923740646 39.0 35.0 40.0 32.0 40.0 25 36.93279019116878 39.0 35.0 40.0 32.0 40.0 26 36.9135615708362 39.0 35.0 40.0 32.0 40.0 27 36.80185476756105 39.0 35.0 40.0 32.0 40.0 28 36.552040433916694 39.0 35.0 40.0 31.0 40.0 29 36.64325515781338 39.0 35.0 40.0 32.0 40.0 30 36.634518249762294 39.0 35.0 40.0 32.0 40.0 31 36.57549631712983 39.0 35.0 40.0 32.0 40.0 32 36.47048278093306 39.0 35.0 40.0 31.0 40.0 33 36.342619273236735 38.0 35.0 40.0 31.0 40.0 34 36.25425580366201 38.0 35.0 40.0 31.0 40.0 35 36.02835521594379 38.0 35.0 40.0 31.0 40.0 36 35.515136295846276 38.0 35.0 40.0 29.0 40.0 37 35.54251809969628 37.0 35.0 40.0 30.0 40.0 38 35.40809848203383 37.0 35.0 40.0 29.0 40.0 39 35.205492012816926 37.0 34.0 40.0 29.0 40.0 40 34.96089045624507 36.0 34.0 40.0 28.0 40.0 41 34.71145975911177 36.0 34.0 40.0 27.0 40.0 42 34.30179929961124 35.0 34.0 40.0 26.0 40.0 43 34.059560072596454 35.0 33.0 39.0 24.0 40.0 44 33.80512677149504 35.0 33.0 39.0 23.0 40.0 45 33.37748864520642 35.0 33.0 39.0 23.0 40.0 46 33.34369918379416 35.0 33.0 39.0 23.0 40.0 47 33.24590091850891 35.0 33.0 38.0 23.0 40.0 48 33.060406412659766 35.0 33.0 38.0 22.0 40.0 49 32.92454785552838 35.0 33.0 37.0 22.0 40.0 50 32.67093225285801 35.0 33.0 37.0 20.0 40.0 51 32.572144842751385 35.0 33.0 37.0 20.0 40.0 52 32.07878022146033 35.0 32.0 36.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 7.0 13 10.0 14 6.0 15 25.0 16 75.0 17 263.0 18 692.0 19 1392.0 20 2510.0 21 4215.0 22 6765.0 23 10061.0 24 14543.0 25 19947.0 26 27008.0 27 35376.0 28 44440.0 29 55574.0 30 66275.0 31 75173.0 32 85168.0 33 110196.0 34 187404.0 35 321220.0 36 237535.0 37 429616.0 38 544192.0 39 199220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.75542869867349 18.739937609650053 34.85960961051818 16.645024081158283 2 24.7735596587047 20.91839595564016 34.23086527177884 20.077179113876305 3 21.41256496305431 22.534671502665084 36.48621228128987 19.56655125299073 4 17.251177836701547 21.205135000921775 36.21294690527163 25.330740257105038 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 100.0 0.0 0.0 0.0 8 0.0 0.0 100.0 0.0 9 0.0 0.0 100.0 0.0 10 100.0 0.0 0.0 0.0 11 99.54484008892621 0.3425297177104928 0.0484487328901545 0.06418146047313555 12 99.43325874406847 0.35608406762813805 0.07321769375156571 0.13743949455183713 13 95.98315226577499 2.107338349249609 0.9101584608390223 0.9993509241363842 14 56.642055033081085 27.569789774453195 5.955926578991 9.832228613474719 15 33.44850496730618 28.654904234080398 17.354973498422087 20.541617300191334 16 30.052172145084793 21.13171560553453 25.768029403257643 23.048082846123034 17 22.705835510702492 21.58118753048216 28.19179727856085 27.521179680254498 18 22.728869837497058 22.393843420633836 28.994408427255703 25.882878314613407 19 25.414325414930524 21.87575259922813 26.29991661654381 26.41000536929754 20 27.46688159992965 22.186857202099795 24.776383481604206 25.569877716366353 21 29.787337897437943 23.002014192533892 20.707859788318167 26.50278812170999 22 30.28578297952849 23.323486259479473 20.818472965324663 25.57225779566737 23 27.83849669350509 23.491221339710332 20.02187252537306 28.648409441411527 24 28.68072204344734 25.376445847749956 19.416001152119744 26.52683095668296 25 31.019129786531092 21.569650196921305 22.67913021413856 24.732089802409043 26 31.76195657041061 21.878253699510548 20.869947222750007 25.48984250732883 27 30.938247430623715 23.77432975554972 20.08266539836678 25.204757415459785 28 30.40732838518881 24.325943388805317 19.989075839411612 25.277652386594262 29 31.053540085577968 23.99753278559237 19.015381363333628 25.93354576549603 30 30.74703427999979 24.673112244136433 18.30732794144521 26.272525534418566 31 29.84631545571056 24.557537206892224 19.784227658215773 25.811919679181443 32 30.396960921114896 24.797320111387712 18.918443557226183 25.88727541027121 33 28.68632934891922 26.419606367155872 18.764625889857193 26.129438394067712 34 28.533237807438677 26.124758916119955 18.878304931726014 26.463698344715358 35 30.25625386006505 26.37962910296425 18.834132273512257 24.52998476345844 36 30.82009061244281 25.78448825672907 19.03498676232165 24.360434368506468 37 31.309539801582066 26.44764289451529 18.80835480447245 23.434462499430193 38 31.024454709713023 27.03265831863937 19.314303187410268 22.628583784237343 39 30.64150398421241 27.276071852577083 20.459161671525656 21.62326249168485 40 31.782731838885574 26.39729816624975 19.27618157826689 22.543788416597785 41 30.95458526311373 26.672499877970512 17.787220103682706 24.58569475523305 42 31.723552578977284 25.731763449162514 18.969716113015846 23.574967858844353 43 32.15382250820824 25.86319223497111 18.239354490221302 23.74363076659934 44 30.272188289283715 26.59766857113351 19.912550238834907 23.217592900747867 45 30.384616781011324 25.385199698738436 19.580266964216918 24.649916556033318 46 29.252707541906542 24.401460481203628 20.48413233402275 25.861699642867087 47 29.481558217748212 23.220174681684565 21.68756497313939 25.61070212742783 48 29.165491754638833 23.682999254914158 21.281620261171348 25.869888729275658 49 29.51217652604432 22.47113548742612 21.592603843061607 26.42408414346795 50 29.186428384422342 23.425385925824628 21.824762425728412 25.563423264024614 51 28.052260086997947 24.64660864920818 22.124571737002043 25.176559526791824 52 29.892182407664013 24.18676926018664 20.9574857326348 24.963562599514542 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 1.5 8 2.0 9 53.5 10 105.0 11 386.0 12 667.0 13 1211.0 14 2033.0 15 2311.0 16 3002.5 17 3694.0 18 4039.0 19 4384.0 20 5010.0 21 5636.0 22 7156.0 23 8676.0 24 11018.0 25 13360.0 26 16397.5 27 19435.0 28 22692.0 29 25949.0 30 29237.5 31 32526.0 32 34379.5 33 36233.0 34 37351.0 35 38469.0 36 38551.5 37 38634.0 38 38228.5 39 39779.0 40 41735.0 41 44976.5 42 48218.0 43 48872.0 44 49526.0 45 56803.0 46 64080.0 47 69302.0 48 74524.0 49 89178.5 50 103833.0 51 110379.5 52 116926.0 53 130372.5 54 143819.0 55 154612.5 56 165406.0 57 182204.5 58 199003.0 59 205996.0 60 212989.0 61 214872.5 62 216756.0 63 199188.0 64 176095.5 65 170571.0 66 149397.0 67 128223.0 68 111592.5 69 94962.0 70 90060.5 71 85159.0 72 68878.0 73 52597.0 74 41311.5 75 30026.0 76 23668.0 77 17310.0 78 13279.0 79 9248.0 80 5220.5 81 1193.0 82 1155.0 83 1117.0 84 643.5 85 170.0 86 163.5 87 157.0 88 117.0 89 40.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2478909.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.021826935361092 #Duplication Level Percentage of deduplicated Percentage of total 1 80.63689577158706 11.306765971139447 2 6.6434411989482385 1.8630636549380002 3 3.043331167562836 1.280191888156695 4 1.802670104880043 1.011069129287088 5 1.2218983023438603 0.8566623264038568 6 0.851268003670403 0.7161799573846035 7 0.5984587067787436 0.5874039090088088 8 0.4648937282919252 0.5214927521155327 9 0.3361270648581583 0.4241803978558791 >10 2.0188563625780507 5.304248911911957 >50 0.4281191732923943 4.499031378217968 >100 1.8087430403932014 57.68842997416805 >500 0.132740811559387 11.787112767068702 >1k 0.012556563255617688 2.154166982343425 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 8.874871969886752E-4 0.0 0.0 0.0 0.0 12 0.006373771687464122 0.0 0.0 0.0 0.0 13 0.028157548340822514 0.0 0.0 0.0 0.0 14 0.08189086408577322 0.0 0.0 0.0 0.0 15 0.1484927441870597 0.0 0.0 0.0 0.0 16 0.192463700765135 0.0 0.0 0.0 0.0 17 0.22029852648887072 0.0 0.0 0.0 0.0 18 0.25446678357293473 0.0 0.0 0.0 0.0 19 0.28577087743035345 0.0 0.0 0.0 0.0 20 0.3180834794661684 0.0 0.0 0.0 0.0 21 0.3455149019185456 0.0 0.0 0.0 0.0 22 0.3812967720880436 0.0 0.0 0.0 0.0 23 0.42187914118670755 0.0 0.0 0.0 0.0 24 0.4679074544487111 0.0 0.0 0.0 0.0 25 0.5187766069670166 0.0 0.0 0.0 0.0 26 0.5752934052843408 0.0 0.0 0.0 0.0 27 0.632092585891616 0.0 0.0 0.0 0.0 28 0.6903843586029177 0.0 0.0 0.0 0.0 29 0.7525084623921249 0.0 0.0 0.0 0.0 30 0.8215711024486982 0.0 0.0 0.0 0.0 31 0.8833724836208187 0.0 0.0 0.0 0.0 32 0.9394051980125128 0.0 0.0 0.0 0.0 33 0.9929368121217842 0.0 0.0 0.0 0.0 34 1.0428781371159652 0.0 0.0 0.0 0.0 35 1.0866473920583613 0.0 0.0 0.0 0.0 36 1.1292467775138175 0.0 0.0 0.0 0.0 37 1.1689416594154929 0.0 0.0 0.0 0.0 38 1.2088785832799833 0.0 0.0 0.0 0.0 39 1.2514376284083037 0.0 0.0 0.0 0.0 40 1.2989585337743337 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATAAG 40 5.6152203E-9 46.000004 44 AACCGTA 20 6.3128734E-4 46.000004 18 AACGTAC 20 6.3128734E-4 46.000004 40 CAAACTA 35 1.0202166E-7 46.000004 33 AAATCGT 20 6.3128734E-4 46.000004 35 CGAACCT 35 1.0202166E-7 46.000004 26 TACCATA 20 6.3128734E-4 46.000004 36 CTATCGA 35 1.0202166E-7 46.000004 43 CGTGCAA 20 6.3128734E-4 46.000004 21 GACGTAA 20 6.3128734E-4 46.000004 43 CCGGATA 35 1.0202166E-7 46.000004 24 TAAACCC 20 6.3128734E-4 46.000004 29 GTGATAG 20 6.3128734E-4 46.000004 23 CGATTTC 75 0.0 46.000004 35 GTCTAAC 20 6.3128734E-4 46.000004 42 CAATTCA 20 6.3128734E-4 46.000004 26 TAGCCTA 20 6.3128734E-4 46.000004 38 TTATCGT 20 6.3128734E-4 46.000004 27 CGTTCGA 35 1.0202166E-7 46.000004 23 CGTTAAC 20 6.3128734E-4 46.000004 29 >>END_MODULE