##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527910_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5762370 Sequences flagged as poor quality 0 Sequence length 59 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.96167427638281 31.0 31.0 33.0 30.0 33.0 2 31.327515588204157 31.0 31.0 33.0 30.0 34.0 3 31.921501222587235 31.0 31.0 34.0 30.0 34.0 4 35.79623904747526 37.0 35.0 37.0 35.0 37.0 5 35.872689015110105 37.0 35.0 37.0 35.0 37.0 6 33.54409053913581 35.0 33.0 35.0 30.0 37.0 7 35.01852761971203 35.0 35.0 37.0 33.0 37.0 8 35.46305652014709 37.0 35.0 37.0 33.0 37.0 9 34.0817660094718 35.0 32.0 37.0 28.0 39.0 10 36.24838200254409 37.0 35.0 39.0 32.0 39.0 11 36.99343429873472 37.0 37.0 39.0 34.0 39.0 12 37.70740320389007 39.0 37.0 39.0 35.0 39.0 13 37.873653548800235 39.0 37.0 39.0 35.0 39.0 14 37.986960399974315 40.0 38.0 40.0 33.0 40.0 15 37.21324732705467 39.0 36.0 40.0 32.0 40.0 16 36.57987997993881 38.0 35.0 40.0 31.0 40.0 17 36.519576320159935 38.0 35.0 40.0 31.0 40.0 18 36.32542374057896 38.0 35.0 40.0 30.0 40.0 19 36.78784163460521 39.0 35.0 40.0 31.0 40.0 20 36.98637852133758 39.0 36.0 40.0 32.0 40.0 21 36.92643530352962 39.0 36.0 40.0 31.0 40.0 22 36.94653554006425 39.0 35.0 40.0 31.0 40.0 23 36.92254037835127 39.0 35.0 40.0 31.0 40.0 24 36.85179223132149 39.0 35.0 40.0 31.0 40.0 25 36.82593134422122 39.0 35.0 40.0 31.0 40.0 26 36.73223309159252 39.0 35.0 40.0 31.0 40.0 27 36.68237669569986 39.0 35.0 40.0 31.0 40.0 28 36.69170514909664 39.0 35.0 40.0 31.0 40.0 29 36.69859762562973 39.0 35.0 40.0 31.0 40.0 30 36.68143021013923 39.0 35.0 40.0 31.0 40.0 31 36.70997176508971 39.0 35.0 40.0 31.0 40.0 32 36.59483875558147 39.0 35.0 40.0 31.0 40.0 33 36.49924892014918 39.0 35.0 40.0 30.0 40.0 34 36.459305806465046 39.0 35.0 40.0 30.0 40.0 35 36.3211817359871 39.0 35.0 40.0 30.0 40.0 36 36.22756053498821 38.0 35.0 40.0 30.0 40.0 37 36.09875155534962 38.0 35.0 40.0 30.0 40.0 38 35.87556283265393 38.0 35.0 40.0 29.0 40.0 39 35.79090096609555 38.0 34.0 40.0 29.0 40.0 40 35.69672270263798 38.0 34.0 40.0 29.0 40.0 41 35.63974128700517 38.0 34.0 40.0 29.0 40.0 42 35.563378089223704 38.0 34.0 40.0 28.0 40.0 43 35.40456565614495 38.0 34.0 40.0 28.0 40.0 44 35.30960195197462 38.0 34.0 40.0 28.0 40.0 45 35.12146356447087 38.0 34.0 40.0 27.0 40.0 46 34.97290906345827 37.0 33.0 40.0 27.0 40.0 47 34.91726442418658 37.0 33.0 40.0 27.0 40.0 48 34.76142455274479 37.0 33.0 40.0 26.0 40.0 49 34.67662767229456 37.0 33.0 40.0 26.0 40.0 50 34.5077483743668 36.0 33.0 40.0 26.0 40.0 51 34.36215619614846 36.0 33.0 39.0 26.0 40.0 52 34.23746965224378 36.0 33.0 39.0 26.0 40.0 53 34.04379812472993 36.0 33.0 39.0 25.0 40.0 54 33.92696772334994 35.0 33.0 39.0 25.0 40.0 55 33.76060683364657 35.0 33.0 39.0 25.0 40.0 56 33.59377756027468 35.0 32.0 39.0 25.0 40.0 57 33.4504228294955 35.0 32.0 38.0 25.0 40.0 58 33.27296303430707 35.0 32.0 38.0 24.0 40.0 59 32.646327118876435 35.0 31.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 16.0 14 44.0 15 185.0 16 558.0 17 1283.0 18 2549.0 19 4604.0 20 7854.0 21 12292.0 22 17909.0 23 24868.0 24 33687.0 25 45061.0 26 59280.0 27 76664.0 28 97315.0 29 121973.0 30 152460.0 31 192445.0 32 244358.0 33 317850.0 34 471252.0 35 550953.0 36 672880.0 37 989248.0 38 1470349.0 39 194427.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.13334096908043 18.32412705189011 30.767045503846507 18.775486475182955 2 30.438638962787877 19.24350571032405 31.245338289627355 19.07251703726071 3 22.262263617226942 22.83883193894179 33.44084118166657 21.4580632621647 4 26.620574520553177 20.251892884351406 32.36331578846898 20.76421680662644 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 100.0 0.0 0.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 0.0 100.0 0.0 10 0.0 100.0 0.0 0.0 11 99.10080400946138 0.7604162870485581 0.11564686057993498 0.02313284291012205 12 99.02718846585692 0.7453009785904064 0.1088614580459082 0.11864909750675502 13 98.11870810100704 1.0403878959525334 0.2993907020895916 0.5415133009508241 14 56.10710523621357 24.722050128679694 7.846563132877618 11.324281502229118 15 34.419483649956526 27.476732663817145 18.64892396704828 19.454859719178046 16 29.307993065353315 19.23205208967838 25.93340934372489 25.526545501243415 17 23.619482955797704 18.926257772409617 27.990601089482283 29.463658182310404 18 22.376140372797998 20.090882744426338 30.740146849299855 26.792830033475813 19 25.37409086886125 21.375267468073034 28.492894416707017 24.7577472463587 20 30.00944056004734 21.135123221868778 25.449372393650528 23.40606382443335 21 30.349508969399743 21.610327000869432 23.80142198435713 24.238742045373694 22 29.958957859353006 21.973771208721413 23.87498546604956 24.192285465876022 23 29.071944356228425 22.625811948902967 23.083574987374984 25.21866870749362 24 28.95088305679781 23.590848904183524 22.88726687109644 24.571001167922226 25 28.888009621041345 22.73561052136534 24.819058824754396 23.557321032838917 26 28.24287576118854 21.20084270881599 24.90740788946215 25.64887364053332 27 28.184844083250464 22.685596377879243 24.37073634632972 24.758823192540568 28 28.483557980483727 22.56751996140477 23.23259353356345 25.71632852454806 29 29.09145021926742 22.08303180809285 22.36480822994705 26.46070974269268 30 26.824032472749927 22.67502780973801 22.779325173496325 27.721614544015743 31 25.957895796347685 21.997528794575842 23.876981172677215 28.167594236399257 32 26.567644909993632 23.594128804641144 22.78980697178418 27.048419313581046 33 28.015486683430602 23.8694842573455 22.580309837792438 25.534719221431462 34 28.096633850308116 22.533853258294766 23.913441865065938 25.456071026331177 35 29.33588089622846 22.296260045779775 22.9012541714607 25.466604886531062 36 31.25177661274788 22.089834564597552 22.5330549756437 24.125333847010864 37 30.897443239500415 22.0397857131701 22.55755878223717 24.505212265092315 38 29.013843262407658 23.17523866048171 24.62965758880461 23.181260488306027 39 27.62103092998193 25.24692097175294 23.967707731367476 23.164340366897648 40 28.004033062784934 26.255377561662996 22.302559537134893 23.43802983841718 41 28.84766163922136 24.927052584266544 21.960478067184162 24.264807709327933 42 28.96757757658741 24.9277120351522 21.835321230674186 24.2693891575862 43 28.711519739273943 23.80732233438672 21.648436320472307 25.832721605867032 44 28.469102122911234 23.91804066729488 22.286385636465553 25.326471573328334 45 26.22325536194309 24.56890133747052 22.446996635065087 26.760846665521303 46 25.273767564387565 24.142548985920723 23.249079805704945 27.33460364398676 47 26.42417963442125 22.134087189819468 23.68249522331957 27.759237952439708 48 27.17100776243108 22.38037474164276 22.832046536407763 27.616570959518395 49 26.7988692152708 22.575919283211597 22.982054258924713 27.643157242592892 50 26.996357401555265 23.77506130290141 22.45973444954073 26.768846846002596 51 25.50697022232172 23.593521415667514 24.632000374845767 26.267507987165 52 26.419650248075012 23.31021784439389 24.042659530713927 26.22747237681718 53 26.91746625086553 23.39563408805752 23.63383468954614 26.05306497153081 54 26.18627405043411 23.460659416177716 23.934943434732585 26.418123098655588 55 24.729321442392628 24.103797569402868 24.693659032654967 26.47322195554954 56 25.454960372207964 23.711580478171307 24.741729531425438 26.09172961819529 57 25.70690531847139 23.117987911224027 25.260838856234503 25.914267914070077 58 25.2273109848899 23.36783302703575 24.765469763309195 26.639386224765154 59 26.454549083102957 22.472749927547174 23.722548187638072 27.350152801711797 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 4.0 9 46.0 10 84.0 11 198.0 12 312.0 13 514.0 14 958.5 15 1201.0 16 1542.0 17 1883.0 18 2264.0 19 2625.0 20 2605.0 21 3007.5 22 3410.0 23 4090.0 24 4770.0 25 6507.0 26 9491.0 27 10738.0 28 14579.5 29 18421.0 30 21769.5 31 31679.5 32 38241.0 33 43707.5 34 49174.0 35 59034.5 36 74865.0 37 80835.0 38 91566.5 39 102298.0 40 109516.5 41 116735.0 42 130119.5 43 155102.5 44 166701.0 45 186951.0 46 207201.0 47 224086.5 48 250017.0 49 259062.0 50 284647.5 51 310233.0 52 332875.5 53 373146.0 54 390774.0 55 401618.0 56 412462.0 57 432429.5 58 460015.5 59 467634.0 60 448381.0 61 429128.0 62 399455.0 63 369782.0 64 328225.5 65 253752.0 66 220835.0 67 188019.5 68 155204.0 69 137822.5 70 100521.0 71 80601.0 72 69804.5 73 59008.0 74 52275.0 75 38292.0 76 31042.0 77 20894.5 78 10747.0 79 7519.5 80 4292.0 81 3472.0 82 2176.5 83 1701.0 84 1181.0 85 661.0 86 462.0 87 236.5 88 210.0 89 241.5 90 273.0 91 234.5 92 263.5 93 331.0 94 166.0 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 5762370.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.538190101589702 #Duplication Level Percentage of deduplicated Percentage of total 1 76.43156006859226 7.290187496953054 2 8.192318256724072 1.5627977781071625 3 3.7256922350408437 1.0660908239350857 4 2.096876655973416 0.8000163265704061 5 1.2815491067338163 0.6111829502274806 6 0.8186323460939756 0.46849625642128273 7 0.5611701896707095 0.3746783563897064 8 0.3786321892109989 0.2889172639420471 9 0.28696197245146454 0.2463388060652294 >10 2.0366551427867594 4.38269895063532 >50 1.0210962267752028 7.307654740507938 >100 2.954528340446344 61.64171856411382 >500 0.20056481640729323 12.281447699872325 >1k 0.013762453092906673 1.677773986259094 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.019905004364523624 0.0 0.0 0.0 0.0 11 0.020980950546389765 0.0 0.0 0.0 0.0 12 0.021466861725297055 0.0 0.0 0.0 0.0 13 0.023653462030379862 0.0 0.0 0.0 0.0 14 0.028321680142024897 0.0 0.0 0.0 0.0 15 0.039914132553098815 0.0 0.0 0.0 0.0 16 0.04518973963837796 0.0 0.0 0.0 0.0 17 0.05013562128082716 0.0 0.0 0.0 0.0 18 0.05605332528109094 0.0 0.0 0.0 0.0 19 0.06323786914064873 0.0 0.0 0.0 0.0 20 0.07031828917615494 0.0 0.0 0.0 0.0 21 0.07710369171018175 0.0 0.0 0.0 0.0 22 0.08498239439674996 0.0 0.0 0.0 0.0 23 0.09346848605695227 0.0 0.0 0.0 0.0 24 0.10068773785786057 0.0 0.0 0.0 0.0 25 0.1090349977526608 0.0 0.0 0.0 0.0 26 0.11760785926623941 0.0 0.0 0.0 0.0 27 0.1266319240173748 0.0 0.0 0.0 0.0 28 0.13522213950162867 0.0 0.0 0.0 0.0 29 0.14441974395951665 0.0 0.0 0.0 0.0 30 0.15601219637059058 0.0 0.0 0.0 0.0 31 0.1661989771569684 0.0 0.0 0.0 0.0 32 0.17558747529228425 0.0 0.0 0.0 0.0 33 0.18492391151557433 0.0 0.0 0.0 0.0 34 0.19419093185616335 0.0 0.0 0.0 0.0 35 0.2035794299914792 0.0 0.0 0.0 0.0 36 0.21274232650801667 0.0 0.0 1.7353970675260352E-5 0.0 37 0.22190522302455412 0.0 0.0 1.7353970675260352E-5 0.0 38 0.2322828974883598 0.0 0.0 1.7353970675260352E-5 0.0 39 0.2449339421106246 0.0 0.0 1.7353970675260352E-5 0.0 40 0.2644050972082667 0.0 0.0 1.7353970675260352E-5 0.0 41 0.28019721052275365 0.0 0.0 1.7353970675260352E-5 0.0 42 0.29375066162013197 0.0 0.0 1.7353970675260352E-5 0.0 43 0.30527369814850486 0.0 0.0 1.7353970675260352E-5 0.0 44 0.31657113305809936 0.0 0.0 1.7353970675260352E-5 0.0 45 0.32724382502338445 0.0 0.0 1.7353970675260352E-5 0.0 46 0.3389230472878347 0.0 0.0 1.7353970675260352E-5 0.0 47 0.34931807572231566 0.0 0.0 1.7353970675260352E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 20 3.139304E-4 53.0 27 CGTAACA 45 7.6397555E-11 53.0 16 TGGTAGG 585165 0.0 51.251495 6 TGTGGTA 193260 0.0 51.248966 4 GGTAGGG 576005 0.0 51.1878 7 GTAGGGG 326005 0.0 51.10601 8 CGTGGTA 124140 0.0 51.065975 4 GTAGGGA 141890 0.0 51.037106 8 GTGGTAG 593200 0.0 51.005795 5 GTAGGGC 65085 0.0 50.996773 8 TAGGGGG 126210 0.0 50.92762 9 TAGGGGA 82795 0.0 50.881153 9 TTGTGGT 68075 0.0 50.823948 3 TAGGGAT 38370 0.0 50.734688 9 TAGGGGC 73115 0.0 50.633247 9 TAGTGGT 39255 0.0 50.61699 3 TAGGGGT 45870 0.0 50.54469 9 TAGGGAC 22360 0.0 50.487476 9 TAGGGCA 30515 0.0 50.333935 9 ACGTGGT 28240 0.0 50.29745 3 >>END_MODULE