##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527907_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3619967 Sequences flagged as poor quality 0 Sequence length 59 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.512528429126565 31.0 31.0 34.0 30.0 34.0 2 31.981730220192613 33.0 31.0 34.0 30.0 34.0 3 32.181870166219745 34.0 31.0 34.0 30.0 34.0 4 35.84938923476374 37.0 35.0 37.0 35.0 37.0 5 35.82191605614084 37.0 35.0 37.0 35.0 37.0 6 35.92120618779121 37.0 35.0 37.0 35.0 37.0 7 36.083977561121415 37.0 35.0 37.0 35.0 37.0 8 35.85548487044219 37.0 35.0 37.0 33.0 37.0 9 36.77398302249717 39.0 37.0 39.0 32.0 39.0 10 37.54719531973634 39.0 37.0 39.0 35.0 39.0 11 37.93401928802113 39.0 37.0 39.0 35.0 39.0 12 37.966093889806174 39.0 38.0 39.0 35.0 39.0 13 37.941207475095766 39.0 38.0 39.0 35.0 39.0 14 38.34829875520965 40.0 38.0 40.0 35.0 40.0 15 37.73585753682285 40.0 38.0 40.0 33.0 40.0 16 37.18597904345537 39.0 36.0 40.0 32.0 40.0 17 37.07894408982181 39.0 36.0 40.0 32.0 40.0 18 37.06299173445504 39.0 36.0 40.0 32.0 40.0 19 37.18394394203041 40.0 36.0 40.0 32.0 40.0 20 37.317663116818466 40.0 36.0 40.0 32.0 40.0 21 37.26532589937975 40.0 36.0 40.0 32.0 40.0 22 37.25884351984424 40.0 36.0 40.0 32.0 40.0 23 37.20383086365152 40.0 36.0 40.0 32.0 40.0 24 37.15784425659129 39.0 36.0 40.0 32.0 40.0 25 37.10633494725228 39.0 36.0 40.0 32.0 40.0 26 36.968897782769844 39.0 36.0 40.0 31.0 40.0 27 36.86093077644078 39.0 36.0 40.0 31.0 40.0 28 36.87018583318577 39.0 35.0 40.0 31.0 40.0 29 36.83981870552964 39.0 35.0 40.0 31.0 40.0 30 36.793953094047545 39.0 35.0 40.0 31.0 40.0 31 36.780645790417424 39.0 35.0 40.0 31.0 40.0 32 36.66304748081958 39.0 35.0 40.0 31.0 40.0 33 36.53245071018603 39.0 35.0 40.0 30.0 40.0 34 36.47468333274861 39.0 35.0 40.0 30.0 40.0 35 36.33806219780457 39.0 35.0 40.0 30.0 40.0 36 36.17796432950908 39.0 35.0 40.0 30.0 40.0 37 36.04655567302133 38.0 35.0 40.0 30.0 40.0 38 35.850843115420666 38.0 35.0 40.0 29.0 40.0 39 35.706712519755015 38.0 35.0 40.0 29.0 40.0 40 35.5514547508306 38.0 34.0 40.0 28.0 40.0 41 35.44607174595791 38.0 34.0 40.0 28.0 40.0 42 35.289825017741876 38.0 34.0 40.0 28.0 40.0 43 35.11000956638555 38.0 34.0 40.0 27.0 40.0 44 34.93746351831384 37.0 34.0 40.0 26.0 40.0 45 34.703209725392526 37.0 33.0 40.0 26.0 40.0 46 34.526910051942465 37.0 33.0 40.0 26.0 40.0 47 34.403970809678654 36.0 33.0 40.0 25.0 40.0 48 34.222559763666354 36.0 33.0 40.0 24.0 40.0 49 34.096613864159536 36.0 33.0 39.0 24.0 40.0 50 33.90938563804587 36.0 33.0 39.0 24.0 40.0 51 33.75372178807155 35.0 33.0 39.0 24.0 40.0 52 33.56240043072216 35.0 33.0 39.0 23.0 40.0 53 33.317170570891946 35.0 32.0 39.0 23.0 40.0 54 33.12123287311735 35.0 32.0 38.0 23.0 40.0 55 32.95979162240982 35.0 32.0 38.0 22.0 40.0 56 32.74896677234903 35.0 32.0 38.0 22.0 40.0 57 32.58120225957861 35.0 31.0 38.0 22.0 40.0 58 32.391054393589776 35.0 31.0 37.0 21.0 40.0 59 31.78943261084977 34.0 30.0 37.0 20.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 2.0 14 20.0 15 62.0 16 247.0 17 702.0 18 1547.0 19 2990.0 20 5363.0 21 8545.0 22 12946.0 23 18360.0 24 25453.0 25 32904.0 26 42440.0 27 53671.0 28 65117.0 29 77649.0 30 92309.0 31 111913.0 32 137322.0 33 173801.0 34 243548.0 35 347148.0 36 397334.0 37 613316.0 38 900975.0 39 254278.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.04233685003206 20.60582320225571 35.41062667145861 17.941213276253624 2 23.556402585990423 21.077263964008512 36.8682366441462 18.49809680585486 3 23.893670853905576 21.1005514691156 36.11455574042526 18.891221936553563 4 26.520462755599706 21.69787735634054 37.610315232155436 14.171344655904322 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 0.0 0.0 100.0 0.0 8 100.0 0.0 0.0 0.0 9 0.0 100.0 0.0 0.0 10 0.0 0.0 100.0 0.0 11 99.48505055432825 0.3934290008721074 0.047127501438549026 0.07439294336108589 12 99.47629356842204 0.33246159426315214 0.15339918844564052 0.037845648869174776 13 97.81470383569794 1.1628282799263086 0.39019692720955745 0.6322709571661841 14 57.65732118552462 29.719221197320305 4.799629388886694 7.82382822826838 15 34.7317254549558 23.956931099095655 20.47010373298983 20.84123971295871 16 29.66864062572946 18.001683440760647 27.70514206344975 24.62453387006014 17 24.300967384509306 17.28612443152106 29.53040732139271 28.882500862576926 18 25.170395199735246 18.563926135238248 30.338591484397508 25.927087180628995 19 25.651062564934985 18.84008887373835 27.923320847952482 27.58552771337418 20 29.36849976809181 18.939040052022573 24.41723916267745 27.275221017208167 21 30.986995185315223 20.67927691053537 21.10267856032942 27.231049343819986 22 30.664837552386526 20.85513486725155 22.193903977577698 26.286123602784222 23 29.338803364782056 20.956903750780047 21.56265512917659 28.141637755261307 24 29.358030059390046 21.76287794888738 22.039013062826264 26.84007892889631 25 31.165090731490093 21.097208897208176 23.160321627241352 24.577378744060375 26 31.30478813757142 20.615519423243363 21.714617840438876 26.36507459874634 27 29.99433420249411 21.704092882614674 22.090339497570007 26.211233417321207 28 30.317016702085958 21.813016527498732 20.843974544519327 27.025992225895983 29 29.345295136668376 21.353564825314706 20.855770232159575 28.445369805857347 30 29.489992588330228 21.355443295477556 20.886074375816133 28.268489740376086 31 29.121784811850493 20.896709831885207 21.417239438923062 28.564265917341235 32 29.113248822434016 22.99656322833882 19.710290176678406 28.179897772548756 33 30.113561808712618 22.783909356079764 20.935052722856312 26.167476112351302 34 29.321455140336916 21.83395594490226 21.427405277451424 27.4171836373094 35 30.948569420660466 22.768964468460624 20.129271896677512 26.153194214201402 36 31.914876572079248 22.957861218071876 20.314908948064996 24.81235326178388 37 32.10043074978308 22.668853058605233 20.826653944635407 24.404062246976284 38 29.651209527600663 24.502543807719796 22.78349498766149 23.06275167701805 39 29.345764754209085 25.391004945625195 22.468050123108856 22.795180177056864 40 29.59513166832736 25.22017465905076 19.973248374916125 25.211445297705755 41 30.261960951577738 25.1092896703202 19.032079574206062 25.596669803896006 42 31.33694312682961 25.038681291846032 19.46056414326429 24.16381143806007 43 31.323213719904075 24.512737270809374 19.441420322339955 24.722628686946592 44 29.597894124449205 24.760391462132112 20.617839886385706 25.02387452703298 45 28.006581275464665 24.47422863247096 20.638392559932175 26.8807975321322 46 27.481106871968723 22.850208303003868 22.31205422590869 27.35663059911872 47 28.07641616622472 22.109731939545306 22.82415834177494 26.989693552455034 48 28.175118723457977 21.617407009511414 22.946369400605032 27.26110486642558 49 28.706366660248563 21.23497258400422 22.45680692669298 27.60185382905424 50 28.20467700396164 22.683659823418278 22.003349754293342 27.10831341832674 51 28.24522985983021 22.179843075917542 23.051094112183897 26.52383295206835 52 28.693272618231052 22.229484412426963 22.876506885283764 26.200736084058224 53 28.729074049570062 22.227412570335588 23.064657771742116 25.97885560835223 54 26.49278294525889 22.68479243042823 22.883081530853737 27.93934309345914 55 26.578446709597074 22.862832727480665 23.227615058369317 27.331105504552944 56 27.799037947031007 22.7036876303016 22.31440231361225 27.18287210905514 57 27.31127106959815 21.301326780050758 23.879665201367857 27.507736948983236 58 28.042465580487335 21.945421049418407 22.70236165136312 27.30975171873114 59 27.405857567209868 21.698623219493438 22.204318437157024 28.69120077613967 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 0.5 5 0.0 6 4.5 7 9.0 8 61.0 9 227.5 10 342.0 11 730.5 12 1119.0 13 1193.0 14 1459.0 15 1651.0 16 1635.5 17 1620.0 18 1826.5 19 2362.5 20 2692.0 21 3787.0 22 4882.0 23 6283.0 24 7684.0 25 9713.5 26 14543.5 27 17344.0 28 19376.5 29 21409.0 30 25604.5 31 30010.0 32 30220.0 33 32048.5 34 33877.0 35 37900.5 36 46722.0 37 51520.0 38 52287.0 39 53054.0 40 56766.0 41 60478.0 42 72781.0 43 94246.5 44 103409.0 45 114850.0 46 126291.0 47 129919.0 48 140791.0 49 148035.0 50 161554.0 51 175073.0 52 198607.5 53 232966.0 54 243790.0 55 268289.5 56 292789.0 57 297528.5 58 304212.5 59 306157.0 60 280379.5 61 254602.0 62 232970.5 63 211339.0 64 192167.0 65 155439.0 66 137883.0 67 126902.0 68 115921.0 69 95540.5 70 67748.5 71 60337.0 72 49117.0 73 37897.0 74 28944.0 75 15033.5 76 10076.0 77 7597.0 78 5118.0 79 4049.5 80 2981.0 81 2201.5 82 948.5 83 475.0 84 373.0 85 271.0 86 189.0 87 64.0 88 21.0 89 12.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 54 0.0 55 0.0 56 0.0 57 0.0 58 0.0 59 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 59 3619967.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.274174473114412 #Duplication Level Percentage of deduplicated Percentage of total 1 80.91841989583327 9.932068038901901 2 7.020540543350156 1.7234267904930656 3 2.9787754595138862 1.0968602911891498 4 1.6879836454819739 0.828744230896378 5 1.059895219713152 0.650466942498958 6 0.6934219385310317 0.510670911420906 7 0.4673016317265733 0.40150192315681127 8 0.3424310915968292 0.3362447170622803 9 0.2384504758683505 0.2634104469604763 >10 1.5811523715257347 4.073670195556424 >50 0.630856173938434 5.855317503176608 >100 2.2152159422625153 60.231133635678006 >500 0.151683505918897 11.960841185030603 >1k 0.013872104739209471 2.1356431879784097 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.004944796458089259 0.0 0.0 0.0 0.0 12 0.010773578875166542 0.0 0.0 0.0 0.0 13 0.01922669460798952 0.0 0.0 0.0 0.0 14 0.053895518937051086 0.0 0.0 0.0 0.0 15 0.0772382731665786 0.0 0.0 0.0 0.0 16 0.09386825902004078 0.0 0.0 0.0 0.0 17 0.10464183789520733 0.0 0.0 0.0 0.0 18 0.11895136060632597 0.0 0.0 0.0 0.0 19 0.13127191490972157 0.0 0.0 0.0 0.0 20 0.1466035463859201 0.0 0.0 0.0 0.0 21 0.1633440304842558 0.0 0.0 0.0 0.0 22 0.18033313563355688 0.0 0.0 0.0 0.0 23 0.19784710744600711 0.0 0.0 0.0 0.0 24 0.2160516932889167 0.0 0.0 0.0 0.0 25 0.23657674227416992 0.0 0.0 0.0 0.0 26 0.2602786157995363 0.0 0.0 0.0 0.0 27 0.28273738407007576 0.0 0.0 0.0 0.0 28 0.3058315172486379 0.0 0.0 0.0 0.0 29 0.33550029599717346 0.0 0.0 0.0 0.0 30 0.3711083554076598 0.0 0.0 0.0 0.0 31 0.4030147236148838 0.0 0.0 0.0 0.0 32 0.4326282532409826 0.0 0.0 0.0 0.0 33 0.4542306601137524 0.0 0.0 0.0 0.0 34 0.4771314213637859 0.0 0.0 0.0 0.0 35 0.49771171947147586 0.0 0.0 0.0 0.0 36 0.5189826316096252 0.0 0.0 0.0 0.0 37 0.5372148420137531 0.0 0.0 0.0 0.0 38 0.5579608874887534 0.0 0.0 0.0 0.0 39 0.5807511504939133 0.0 0.0 0.0 0.0 40 0.6086795818856913 0.0 0.0 0.0 0.0 41 0.6377958694098592 0.0 0.0 0.0 0.0 42 0.6620778587208116 0.0 0.0 0.0 0.0 43 0.6847852480423164 0.0 0.0 0.0 0.0 44 0.7076031356086948 0.0 0.0 0.0 0.0 45 0.7296475354609586 0.0 0.0 0.0 0.0 46 0.7545372651187152 0.0 0.0 0.0 0.0 47 0.7767474123382893 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAG 20 3.1391467E-4 53.000004 50 CCGTATA 20 3.1391467E-4 53.000004 24 CTTATCG 40 1.6025297E-9 53.000004 30 CATAACG 20 3.1391467E-4 53.000004 19 CGTAACG 20 3.1391467E-4 53.000004 18 ACCGTAC 20 3.1391467E-4 53.000004 36 CGGTATA 20 3.1391467E-4 53.000004 27 CGTATAA 45 7.6397555E-11 53.0 39 TCCGATA 15 0.0066974233 53.0 47 TACGATA 50 3.6379788E-12 53.0 28 CGTAAAT 60 0.0 53.0 51 ACGTAAC 35 3.3447577E-8 53.0 34 TCATACG 60 0.0 53.0 52 ATACGTA 70 0.0 53.0 17 TTACCGC 25 1.4793699E-5 53.0 19 GCGTATT 35 3.3447577E-8 53.0 15 ATCGAAC 45 7.6397555E-11 53.0 28 ACGCGTA 45 7.6397555E-11 53.0 26 CGCATGA 20920 0.0 51.16324 3 CACGCAT 1595 0.0 50.840126 1 >>END_MODULE