##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527903_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 373883 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.298205588379254 33.0 31.0 34.0 31.0 34.0 2 32.98748538981446 34.0 31.0 34.0 31.0 34.0 3 33.28403003078503 34.0 34.0 34.0 31.0 34.0 4 36.508092103679495 37.0 37.0 37.0 35.0 37.0 5 36.413412752117644 37.0 37.0 37.0 35.0 37.0 6 36.514043163235556 37.0 37.0 37.0 35.0 37.0 7 36.52328669664039 37.0 37.0 37.0 35.0 37.0 8 36.644656215982 37.0 37.0 37.0 35.0 37.0 9 38.76887956927702 39.0 39.0 39.0 39.0 39.0 10 38.32810264173552 39.0 39.0 39.0 37.0 39.0 11 38.10440431899819 39.0 39.0 39.0 37.0 39.0 12 37.639205312892 39.0 37.0 39.0 35.0 39.0 13 37.52714886742644 39.0 37.0 39.0 35.0 39.0 14 38.340288271999526 40.0 38.0 40.0 35.0 40.0 15 38.3764707141004 40.0 38.0 40.0 35.0 40.0 16 38.46303522759794 40.0 38.0 40.0 35.0 40.0 17 38.41900541078359 40.0 38.0 40.0 35.0 40.0 18 38.31529382186406 40.0 38.0 40.0 35.0 40.0 19 38.338958979145886 40.0 38.0 40.0 35.0 40.0 20 38.2523169012766 40.0 38.0 40.0 34.0 40.0 21 38.19778379867498 40.0 38.0 40.0 34.0 40.0 22 38.21971311880989 40.0 38.0 40.0 34.0 40.0 23 38.15646338560459 40.0 38.0 40.0 34.0 40.0 24 38.062428620718244 40.0 38.0 40.0 34.0 40.0 25 38.03983331683976 40.0 38.0 40.0 34.0 40.0 26 37.89948994738996 40.0 37.0 40.0 34.0 40.0 27 37.806361883262944 40.0 37.0 40.0 34.0 40.0 28 37.608208985163806 40.0 37.0 40.0 33.0 40.0 29 37.64892493106132 40.0 37.0 40.0 34.0 40.0 30 37.752443946368246 40.0 37.0 40.0 34.0 40.0 31 37.786901249856236 40.0 37.0 40.0 34.0 40.0 32 37.726296729190686 40.0 37.0 40.0 34.0 40.0 33 37.64506543490878 40.0 36.0 40.0 34.0 40.0 34 37.293000751572016 40.0 35.0 40.0 33.0 40.0 35 37.23244704894312 40.0 35.0 40.0 33.0 40.0 36 37.25010230473169 40.0 35.0 40.0 33.0 40.0 37 37.16015170521259 40.0 35.0 40.0 33.0 40.0 38 37.04437216990342 40.0 35.0 40.0 33.0 40.0 39 36.96771717355429 40.0 35.0 40.0 33.0 40.0 40 36.773284690665264 39.0 35.0 40.0 33.0 40.0 41 36.60900067668228 39.0 35.0 40.0 32.0 40.0 42 36.50452681721287 39.0 35.0 40.0 32.0 40.0 43 36.38765603143229 39.0 35.0 40.0 32.0 40.0 44 36.04523340189311 38.0 35.0 40.0 31.0 40.0 45 36.032865896550526 38.0 35.0 40.0 31.0 40.0 46 35.843333342248776 38.0 35.0 40.0 31.0 40.0 47 35.6781533260405 37.0 35.0 40.0 30.0 40.0 48 35.62728447134531 37.0 35.0 40.0 30.0 40.0 49 35.385679477269626 37.0 35.0 40.0 30.0 40.0 50 35.00798645565592 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 4.0 16 18.0 17 24.0 18 55.0 19 80.0 20 151.0 21 273.0 22 427.0 23 592.0 24 835.0 25 1160.0 26 1489.0 27 2064.0 28 2797.0 29 3567.0 30 4604.0 31 6017.0 32 7522.0 33 10271.0 34 20830.0 35 26443.0 36 33143.0 37 55738.0 38 115264.0 39 80514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.38670653653683 0.40948639012739274 0.07997154189947123 0.12383553143630495 8 99.44902549728124 0.41563804719658287 0.10885758378958123 0.02647887173260084 9 99.12058050245665 0.5116573901461152 0.16101293720227985 0.20674917019495404 10 65.83423156441988 25.854612271753464 3.2194563539930945 5.091699809833558 11 37.12578533926389 28.03631082450927 17.45599559220398 17.381908244022863 12 29.88234287196797 18.337554796554002 26.25019056763747 25.529911763840555 13 24.305999470422567 16.914382306764416 30.996060264842214 27.78355795797081 14 24.373400234832822 18.91581056105787 30.67644156059516 26.03434764351415 15 22.675007957034687 19.86958487013317 29.02512283254387 28.43028434028827 16 28.60039103141892 20.8672231687453 23.352760088048935 27.17962571178684 17 30.697838628661906 20.7792277263208 23.312640585423782 25.210293059593507 18 27.298646902908132 21.223216888705824 23.461885135189352 28.016251073196695 19 29.895716039509683 22.104508629705013 21.433978009163294 26.565797321622004 20 29.095198230462472 21.467143464666755 21.99297641240709 27.444681892463684 21 30.39988445583244 20.885678139952873 23.921387171922767 24.793050232291918 22 30.31456364691628 20.454527218407897 22.686776344471397 26.544132790204422 23 28.516140075906097 21.65249556679496 23.56780062211975 26.263563735179186 24 29.487566966136463 22.524961017216615 22.317141993618325 25.670330023028594 25 28.20802229574493 22.914655119382267 21.690207899262603 27.187114685610204 26 27.142448306020867 22.638632941321216 21.901236483070907 28.317682269587007 27 26.629186135769743 21.906853213438428 23.04758440474694 28.416376246044884 28 29.159656898013548 21.602212456838103 20.245370878055436 28.992759767092913 29 29.6373464426037 22.533519844443315 23.118729656068876 24.710404056884105 30 28.9101135916851 20.206053765482785 22.51907682349826 28.364755819333855 31 28.10932831928705 23.064969522551173 21.99217402235459 26.83352813580719 32 31.715536678586613 23.125683703190568 21.680044291930898 23.478735326291915 33 32.757038966735585 21.760550760532038 21.064343658310218 24.41806661442216 34 28.17218220673312 25.856751978560137 23.17008261942907 22.800983195277666 35 27.72016914382307 24.985891308243488 25.744684834560545 21.5492547133729 36 29.54052470960167 23.532227996458786 21.944833009256907 24.98241428468264 37 27.678712324443744 26.03434764351415 21.18898157979903 25.09795845224308 38 31.695744390624874 25.552111221959812 21.122650668792108 21.629493718623205 39 28.859830481728245 24.70585717991992 20.44115405086618 25.993158287485656 40 27.651163599307804 23.96311145465293 22.097019655881653 26.288705290157615 41 27.831968824471826 23.991997496543036 23.492108493833634 24.683925185151505 42 27.025834285057087 23.076202983286215 21.609166503959795 28.2887962276969 43 26.79902536354956 20.985174506463252 25.151718585760786 27.064081544226404 44 26.15417122468794 20.393545574417665 25.376655263812474 28.075627937081922 45 27.371664397685908 20.271314823086367 25.3916332114592 26.965387567768527 46 28.06733657320606 22.931772773835664 22.8627672293204 26.138123423637875 47 26.984912392379435 24.597801986182844 22.56695276329761 25.850332858140114 48 30.025435764664348 23.606582807990737 21.952589446431105 24.415391980913814 49 27.565040400339143 22.852603621988695 24.550460973085166 25.031895004586996 50 25.5061075256163 24.091493863053415 23.424707729423375 26.977690881906906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.5 4 11.0 5 18.0 6 25.0 7 15.0 8 5.0 9 79.0 10 153.0 11 776.0 12 1399.0 13 1508.5 14 1618.0 15 1396.5 16 1175.0 17 994.0 18 813.0 19 873.0 20 933.0 21 1045.0 22 1157.0 23 1855.0 24 2553.0 25 2122.5 26 1692.0 27 2009.5 28 2327.0 29 2556.0 30 2785.0 31 3295.0 32 3805.0 33 3836.0 34 3867.0 35 4656.5 36 5446.0 37 6149.5 38 6853.0 39 7659.0 40 8465.0 41 9092.0 42 9719.0 43 10269.5 44 10820.0 45 11914.5 46 13009.0 47 14313.5 48 15618.0 49 16608.0 50 17598.0 51 17871.0 52 18144.0 53 20381.0 54 22618.0 55 28065.5 56 33513.0 57 33067.5 58 32622.0 59 35466.5 60 38311.0 61 35221.0 62 32131.0 63 28823.5 64 25516.0 65 20997.0 66 16478.0 67 14982.5 68 13487.0 69 11928.0 70 10369.0 71 8421.5 72 6474.0 73 6689.0 74 6904.0 75 5174.0 76 3444.0 77 2354.5 78 1265.0 79 874.0 80 483.0 81 338.5 82 194.0 83 116.5 84 39.0 85 39.5 86 40.0 87 22.0 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 373883.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.218972245328084 #Duplication Level Percentage of deduplicated Percentage of total 1 69.4610935168948 7.098209867792865 2 8.901510194466983 1.819285712375262 3 3.3711100060198396 1.033478387623936 4 1.617504645745544 0.6611694032625179 5 0.8270735729054886 0.42259209431827605 6 0.5784280367471929 0.35465640320635067 7 0.36904232208757554 0.26398632727350535 8 0.36380767922108515 0.29741924612779935 9 0.31931321485591646 0.2936747592161184 >10 8.461800193681785 25.123634933923178 >50 4.090873400162274 28.694538130912612 >100 1.5651582170806397 26.828446332141336 >500 0.05496375009814955 3.7372654012083992 >1k 0.018321250032716518 3.37164300061784 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CAACAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3727 0.9968359085596297 No Hit CAACAAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2938 0.785807324751326 No Hit CAACAAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 1745 0.46672354720594406 No Hit CAACAAGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 1070 0.2861857853927566 No Hit CAACAAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 1045 0.2794992016218978 No Hit CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 1043 0.27896427492022907 No Hit CAACAAGGGGAACCTGGCGCTAAACCATTCGTAGACGACCTGCTTCTGGG 1038 0.2776269581660573 No Hit CAACAAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 934 0.24981076967928467 No Hit CAACAAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 846 0.22627399480586174 No Hit CAACAAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 818 0.21878502098249988 No Hit CAACAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 784 0.20969126705413188 No Hit CAACAAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 742 0.19845780631908913 No Hit CAACAAGGGATGTGTGTATGTATGTGTGTCTGTGTGTGTCTGTGTGTCCA 730 0.1952482461090769 No Hit CAACAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 721 0.19284107595156774 No Hit CAACAAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 717 0.1917712225482303 No Hit CAACAAGGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGGAAGTGCAGCG 700 0.18722434558404635 No Hit CAACAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 654 0.17492103144566618 No Hit CAACAAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 632 0.1690368377273104 No Hit CAACAAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 626 0.1674320576223043 No Hit CAACAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 610 0.16315264400895468 No Hit CAACAAGGGAGATTTCTACCACTCCAAAAAAAAAAAAAAAAAAAAAAAAA 608 0.16261771730728597 No Hit CAACAAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 600 0.16047801050061117 No Hit CAACAAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGA 585 0.15646606023809587 No Hit CAACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 576 0.1540588900805867 No Hit CAACAAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 571 0.15272157332641495 No Hit CAACAAGGGGGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 513 0.13720869897802254 No Hit CAACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTG 505 0.1350689921713477 No Hit CAACAAGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGT 501 0.1339991387680103 No Hit CAACAAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 500 0.13373167541717595 No Hit CAACAAGGGGACGGGGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTA 499 0.13346421206634163 No Hit CAACAAGGGGAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 490 0.13105704190883244 No Hit CAACAAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAG 485 0.12971972515466068 No Hit CAACAAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 481 0.12864987175132328 No Hit CAACAAGGGGAGCATCAGTTCCTGGGTCCTGTCCGAAGGCACGCTCAGGA 480 0.12838240840048892 No Hit CAACAAGGGGAGCACAGCTGGCCATCAGAGTCACCAATCCCAACGCCAGG 478 0.12784748169882024 No Hit CAACAAGGGGGAGCTGGTGAGATGGCTCCGCAGTTAAGAGCACTGACTAC 473 0.12651016494464848 No Hit CAACAAGGGAGTGAGCACACTGCTTCAAATAAGGTCATGTGTGAAAGAAC 471 0.12597523824297976 No Hit CAACAAGGGTAGCAAATCTACTCAAGAATGACCCCATGGTCTGTGGGGTG 463 0.12383553143630495 No Hit CAACAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 452 0.12089343457712706 No Hit CAACAAGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAAC 451 0.12062597122629272 No Hit CAACAAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 443 0.1184862644196179 No Hit CAACAAGGGGAGCAGGACGGTGGCCATGGAAGTCGGAATCCGCTAAGGAG 434 0.11607909426210875 No Hit CAACAAGGGGGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTG 427 0.11420685080626826 No Hit CAACAAGGGGTCTGTTTGCTGCTTTAGGTGTCTCTTTTCCTCCCTCTCTA 421 0.11260207070126216 No Hit CAACAAGGGAAGGAAAAGGCAGAGAAGCTGAAGCAGTCCCTACCCCCGGG 418 0.11179968064875911 No Hit CAACAAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 417 0.11153221729792474 No Hit CAACAAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 414 0.1107298272454217 No Hit CAACAAGGGGCTTTTCAGCCAAGATGGCGCCGAAAGCGAAGAAGGAAGCT 401 0.10725280368457511 No Hit CAACAAGGGGGCCTCTCCTTCCTGCGGCGCCTTAGGGACCATGGCCGATC 391 0.1045781701762316 No Hit CAACAAGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGA 389 0.1040432434745629 No Hit CAACAAGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCTGACTGC 388 0.10377578012372855 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.054027596868539085 0.0 0.0 0.0 0.0 7 0.05456252357020779 0.0 0.0 0.0 0.0 8 0.07729690839112771 0.0 0.0 0.0 0.0 9 0.10377578012372854 0.0 0.0 0.0 0.0 10 0.1690368377273104 0.0 0.0 0.0 0.0 11 0.23456535868172665 0.0 0.0 0.0 0.0 12 0.25221793983679386 0.0 0.0 0.0 0.0 13 0.26559110737851144 0.0 0.0 0.0 0.0 14 0.28458100528775043 0.0 0.0 0.0 0.0 15 0.30009387963614287 0.0 0.0 0.0 0.0 16 0.3177464607912101 0.0 0.0 0.0 0.0 17 0.33299187178876816 0.0 0.0 0.0 0.0 18 0.3471674293829888 0.0 0.0 0.0 0.0 19 0.3720415210105835 0.0 0.0 0.0 0.0 20 0.3827400550439576 0.0 0.0 0.0 0.0 21 0.3966481492873439 0.0 0.0 0.0 0.0 22 0.412695950337405 0.0 0.0 0.0 0.0 23 0.4335580917024845 0.0 0.0 0.0 0.0 24 0.4528154529625578 0.0 0.0 0.0 0.0 25 0.4688632540126189 0.0 0.0 0.0 0.0 26 0.4851785184135144 0.0 0.0 0.0 0.0 27 0.5022961728669129 0.0 0.0 0.0 0.0 28 0.5223559241794893 0.0 0.0 0.0 0.0 29 0.5432180655445688 0.0 0.0 0.0 0.0 30 0.5600682566471329 0.0 0.0 0.0 0.0 31 0.5774533744513658 0.0 0.0 0.0 0.0 32 0.5956408823081017 0.0 0.0 0.0 0.0 33 0.6130260001123347 0.0 0.0 0.0 0.0 34 0.6362953116349233 0.0 0.0 0.0 0.0 35 0.653680429439156 0.0 0.0 0.0 0.0 36 0.6705306205417203 0.0 0.0 0.0 0.0 37 0.6892530551001249 0.0 0.0 0.0 0.0 38 0.7058357828518548 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGACTA 65 0.0 44.000004 43 TAGCACG 65 0.0 44.000004 22 CTAGCAC 65 0.0 44.000004 21 TAATCAC 20 7.849659E-4 44.0 23 GCGAGAA 20 7.849659E-4 44.0 20 TCGCCCT 25 4.4370605E-5 44.0 42 TATTTCG 20 7.849659E-4 44.0 37 AACGTTT 20 7.849659E-4 44.0 21 ACTATTC 55 1.8189894E-12 44.0 42 AACCGTA 20 7.849659E-4 44.0 13 CGGAACT 40 8.287316E-9 44.0 33 GGTACTC 25 4.4370605E-5 44.0 9 TCGTTGA 20 7.849659E-4 44.0 14 TACCCGT 35 1.4425859E-7 44.0 35 ACACGCA 20 7.849659E-4 44.0 20 CATATTC 25 4.4370605E-5 44.0 41 GATAATG 20 7.849659E-4 44.0 10 CATATGA 20 7.849659E-4 44.0 25 GTCGATT 25 4.4370605E-5 44.0 44 GTCGATG 25 4.4370605E-5 44.0 42 >>END_MODULE