##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527901_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 569012 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.903850885394334 31.0 31.0 34.0 31.0 34.0 2 32.658915804939085 34.0 31.0 34.0 31.0 34.0 3 33.03718023521472 34.0 31.0 34.0 31.0 34.0 4 36.345201858660275 37.0 37.0 37.0 35.0 37.0 5 36.19464264374038 37.0 37.0 37.0 35.0 37.0 6 36.245131912859485 37.0 37.0 37.0 35.0 37.0 7 36.38694614524825 37.0 36.0 37.0 35.0 37.0 8 36.50979592697518 37.0 37.0 37.0 35.0 37.0 9 38.64197943101376 39.0 39.0 39.0 38.0 39.0 10 37.99907910553732 39.0 38.0 39.0 37.0 39.0 11 37.72712350530393 39.0 38.0 39.0 35.0 39.0 12 37.223707057144665 39.0 37.0 39.0 34.0 39.0 13 36.95237886019979 39.0 37.0 39.0 33.0 39.0 14 37.91890329202196 40.0 38.0 40.0 33.0 40.0 15 37.99939368589766 40.0 38.0 40.0 34.0 40.0 16 38.1135582377876 40.0 38.0 40.0 34.0 40.0 17 38.08340773129565 40.0 38.0 40.0 34.0 40.0 18 38.043151989764716 40.0 38.0 40.0 34.0 40.0 19 38.0321487068814 40.0 38.0 40.0 34.0 40.0 20 38.01492235664626 40.0 38.0 40.0 34.0 40.0 21 37.99704927136862 40.0 38.0 40.0 34.0 40.0 22 37.87622580894603 40.0 38.0 40.0 34.0 40.0 23 37.8686284296289 40.0 37.0 40.0 34.0 40.0 24 37.83483476622637 40.0 37.0 40.0 34.0 40.0 25 37.803359155870176 40.0 37.0 40.0 34.0 40.0 26 37.61132981378248 40.0 37.0 40.0 33.0 40.0 27 37.51449178576199 40.0 36.0 40.0 33.0 40.0 28 37.41575748841852 40.0 36.0 40.0 33.0 40.0 29 37.31982629540326 40.0 36.0 40.0 33.0 40.0 30 37.212466520916955 40.0 36.0 40.0 33.0 40.0 31 37.14905836783758 40.0 35.0 40.0 33.0 40.0 32 37.000720547194085 39.0 35.0 40.0 32.0 40.0 33 36.68629132601773 39.0 35.0 40.0 31.0 40.0 34 36.60372891960099 39.0 35.0 40.0 31.0 40.0 35 36.47761910117889 39.0 35.0 40.0 31.0 40.0 36 36.36355472292324 39.0 35.0 40.0 31.0 40.0 37 36.34261667592248 38.0 35.0 40.0 31.0 40.0 38 35.94375338305695 38.0 35.0 40.0 30.0 40.0 39 36.03362494991318 38.0 35.0 40.0 30.0 40.0 40 35.88119934201739 38.0 35.0 40.0 30.0 40.0 41 35.521614658390334 38.0 34.0 40.0 29.0 40.0 42 35.567197176860944 38.0 34.0 40.0 29.0 40.0 43 35.538452616113545 38.0 34.0 40.0 29.0 40.0 44 35.34436883580663 37.0 34.0 40.0 29.0 40.0 45 35.25198238349982 37.0 34.0 40.0 29.0 40.0 46 34.9211756518316 37.0 34.0 40.0 28.0 40.0 47 34.56105670882161 36.0 33.0 40.0 26.0 40.0 48 34.58522667360267 36.0 33.0 40.0 27.0 40.0 49 34.36370058979424 35.0 33.0 39.0 27.0 40.0 50 34.29075133740589 35.0 33.0 39.0 27.0 40.0 51 34.56243277821909 35.0 33.0 39.0 28.0 40.0 52 34.28828917492074 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 0.0 14 2.0 15 3.0 16 17.0 17 50.0 18 98.0 19 173.0 20 327.0 21 487.0 22 921.0 23 1255.0 24 1852.0 25 2681.0 26 3542.0 27 4704.0 28 6047.0 29 7670.0 30 9943.0 31 12696.0 32 16445.0 33 23251.0 34 39469.0 35 45129.0 36 64976.0 37 94923.0 38 164967.0 39 67382.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.46187426627206 0.4024519693785017 0.04463877738958054 0.09103498695985321 8 99.5467582405995 0.3542983276275368 0.0692428279192706 0.029700603853697286 9 99.14377904156679 0.510006818836861 0.14973322179497095 0.19648091780138205 10 65.82181043633526 25.982053102570774 3.157051169395373 5.039085291698593 11 36.994650376441975 28.080602869535266 17.396293927017357 17.528452827005406 12 29.885837205542238 18.258314411646854 26.189605843110513 25.666242539700395 13 24.54781269990791 16.757115842899623 30.93678164959614 27.758289807596327 14 24.295269695542448 18.864277027549505 30.68441438844875 26.156038888459292 15 22.67017215805642 19.755119399942355 29.040160840193174 28.534547601808047 16 28.569520502203822 20.76581864705841 23.55257885598195 27.112081994755822 17 30.87263537500088 20.51257266982067 23.20267410880614 25.412117846372308 18 27.366909660956185 21.08356238532755 23.515848523405484 28.03367943031078 19 29.978629624682785 22.018340562237704 21.34085045658088 26.662179356498633 20 28.92996984246378 21.317476608577675 22.174400539883166 27.57815300907538 21 30.575629336463905 20.552114893886245 23.850463610609264 25.021792159040583 22 30.60146358952008 20.201331430620094 22.727640190365054 26.469564789494775 23 28.648429207116898 21.56685623501789 23.49388062114683 26.290833936718382 24 29.557548874188942 22.145578652119816 22.399176115793693 25.897696357897548 25 28.20063548747654 22.823420244212773 21.697609189261385 27.2783350790493 26 27.185894146344893 22.385468144784294 22.12589541169606 28.302742297174753 27 26.623515848523404 21.62080940296514 23.082290004428728 28.673384744082725 28 29.234884325813866 21.52889569991494 20.23085629125572 29.005363683015474 29 29.67547257351339 22.33046051752863 23.082641490864866 24.911425418093117 30 28.902026670790775 20.081123069460748 22.62377594848615 28.39307431126233 31 28.216803863538907 22.873507061362503 21.906743618763752 27.002945456334842 32 31.864705841001594 22.942046916409495 21.617646025039893 23.575601217549014 33 32.89860319290278 21.517999620394647 21.136988323620592 24.446408863081974 34 28.192199813009218 25.526702424553438 23.411632795090437 22.86946496734691 35 27.8806070873725 24.64007788939425 25.820545085165165 21.65876993806809 36 29.765804587600964 23.20724343247594 21.941365032723386 25.085586947199705 37 27.912592353061093 25.847258054311684 21.226441621617823 25.013707971009396 38 31.68861113649624 25.403506428686917 21.154211158991373 21.753671275825464 39 29.047190568915948 24.433052378508712 20.464594771287775 26.055162281287565 40 27.655128538589697 23.978228930145587 22.04856839574561 26.318074135519108 41 28.019444229647178 23.761713285484312 23.409875362909744 24.808967121958762 42 26.978165662587077 22.75329870020316 21.8317012646482 28.436834372561563 43 26.917007022698996 20.784798914609883 25.090683500523713 27.207510562167407 44 26.005778437010115 20.25370290960472 25.42811047921661 28.312408174168556 45 27.536853352829116 19.86794654594279 25.389095484805242 27.206104616422856 46 28.269175342523532 22.580015887186914 23.043099266799295 26.107709503490263 47 27.192572388631525 24.206870856853634 22.77790275073285 25.82265400378199 48 29.977750908592437 23.322530983529347 22.121501831244334 24.578216276633885 49 27.654777052153555 22.519384476953032 24.799476988183024 25.026361482710378 50 25.410184670973546 23.927263396905513 23.441333398944135 27.221218533176806 51 25.545331205668774 23.604247362094295 22.940113741010734 27.910307691226194 52 28.145803603438946 23.51356386157058 23.454338397081255 24.886294137909218 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.0 4 10.0 5 22.5 6 35.0 7 27.5 8 20.0 9 105.5 10 191.0 11 1053.0 12 1915.0 13 1974.5 14 1859.5 15 1685.0 16 1398.5 17 1112.0 18 1274.5 19 1437.0 20 1398.0 21 1359.0 22 2088.0 23 2817.0 24 2720.5 25 2624.0 26 2622.5 27 2621.0 28 3072.5 29 3524.0 30 4347.0 31 5170.0 32 5245.5 33 5321.0 34 5819.0 35 6317.0 36 7742.0 37 9167.0 38 9589.0 39 11096.5 40 12182.0 41 14001.5 42 15821.0 43 15431.0 44 15041.0 45 17434.0 46 19827.0 47 21361.0 48 22895.0 49 22635.5 50 22376.0 51 25860.5 52 29345.0 53 30901.5 54 32458.0 55 38205.5 56 43953.0 57 50024.0 58 56095.0 59 53265.0 60 50435.0 61 49574.0 62 48713.0 63 44925.0 64 35442.5 65 29748.0 66 25564.0 67 21380.0 68 18053.5 69 14727.0 70 14246.5 71 13766.0 72 12805.0 73 11844.0 74 8862.5 75 5881.0 76 3921.0 77 1961.0 78 1691.0 79 1421.0 80 946.5 81 472.0 82 304.5 83 137.0 84 75.5 85 14.0 86 10.0 87 6.0 88 5.5 89 2.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 569012.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.4608971339796 #Duplication Level Percentage of deduplicated Percentage of total 1 74.42457407198465 9.27396961751246 2 9.770957914927225 2.435098029567039 3 3.6274399187633986 1.3560346706220607 4 1.6303734627101434 0.8126366403520487 5 0.8955771183572153 0.5579847173697567 6 0.6050434390161344 0.45236304331015864 7 0.35682048967618185 0.3112412392005793 8 0.2623265260069954 0.26150590848699146 9 0.18052578133814734 0.20245618721573536 >10 3.523073451427282 12.52592212466521 >50 2.9025160780774004 26.006305666664325 >100 1.741791718379781 36.28306608647972 >500 0.06064537966828388 5.177746690755203 >1k 0.016924292000451313 3.397467891714059 >5k 0.001410357666704276 0.946201486084652 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CAACAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 5384 0.946201486084652 No Hit CAACAAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4258 0.7483146225387163 No Hit CAACAAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 2458 0.4319768300141298 No Hit CAACAAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 1621 0.28487975649019703 No Hit CAACAAGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 1498 0.26326334066768364 No Hit CAACAAGGGGAACCTGGCGCTAAACCATTCGTAGACGACCTGCTTCTGGGTC 1371 0.24094395197289337 No Hit CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 1359 0.2388350333560628 No Hit CAACAAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1217 0.21387949639023432 No Hit CAACAAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1181 0.2075527405397426 No Hit CAACAAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1145 0.20122598468925085 No Hit CAACAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1107 0.19454774240262068 No Hit CAACAAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 1096 0.19261456700385932 No Hit CAACAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1021 0.17943382564866822 No Hit CAACAAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 1000 0.17574321806921472 No Hit CAACAAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 984 0.17293132658010726 No Hit CAACAAGGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGGAAGTGCAGCGGA 924 0.1623867334959544 No Hit CAACAAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 920 0.16168376062367754 No Hit CAACAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 905 0.1590476123526393 No Hit CAACAAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 868 0.15254511328407835 No Hit CAACAAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 849 0.1492059921407633 No Hit CAACAAGGGGGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 826 0.14516389812517133 No Hit CAACAAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 818 0.14375795238061764 No Hit CAACAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 808 0.14200052019992548 No Hit CAACAAGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTCT 742 0.1304014678073573 No Hit CAACAAGGGGACGGGGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAG 725 0.12741383310018067 No Hit CAACAAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 715 0.12565640091948851 No Hit CAACAAGGGGGAGCTGGTGAGATGGCTCCGCAGTTAAGAGCACTGACTACTC 700 0.1230202526484503 No Hit CAACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 696 0.12231727977617343 No Hit CAACAAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 687 0.1207355908135505 No Hit CAACAAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGA 685 0.12038410437741208 No Hit CAACAAGGGTAGCAAATCTACTCAAGAATGACCCCATGGTCTGTGGGGTGGG 679 0.11932964506899679 No Hit CAACAAGGGGAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGATGG 677 0.11897815863285835 No Hit CAACAAGGGATGTGTGTATGTATGTGTGTCTGTGTGTGTCTGTGTGTCCATG 676 0.11880241541478914 No Hit CAACAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 671 0.11792369932444306 No Hit CAACAAGGGAGATTTCTACCACTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 663 0.11651775357988935 No Hit CAACAAGGGGAGCACAGCTGGCCATCAGAGTCACCAATCCCAACGCCAGGCT 652 0.114584578181128 No Hit CAACAAGGGGAGCATCAGTTCCTGGGTCCTGTCCGAAGGCACGCTCAGGAGC 644 0.11317863243657426 No Hit CAACAAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 641 0.11265140278236663 No Hit CAACAAGGGGAGCAGGACGGTGGCCATGGAAGTCGGAATCCGCTAAGGAGTG 632 0.11106971381974369 No Hit CAACAAGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCTGACTGCTC 624 0.10966376807518999 No Hit CAACAAGGGAGTGAGCACACTGCTTCAAATAAGGTCATGTGTGAAAGAACAT 622 0.10931228163905155 No Hit CAACAAGGGGGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCTGGT 621 0.10913653842098234 No Hit CAACAAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 620 0.10896079520291312 No Hit CAACAAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 607 0.10667613336801332 No Hit CAACAAGGGAAGGAAAAGGCAGAGAAGCTGAAGCAGTCCCTACCCCCGGGTT 603 0.10597316049573648 No Hit CAACAAGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAACAC 596 0.10474295796925195 No Hit CAACAAGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGAGA 592 0.10403998509697511 No Hit CAACAAGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 577 0.10140383682593689 No Hit CAACAAGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 573 0.10070086395366003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0418268859004731 0.0 0.0 0.0 0.0 7 0.04217837233661153 0.0 0.0 0.0 0.0 8 0.05869823483511771 0.0 0.0 0.0 0.0 9 0.08013890743956191 0.0 0.0 0.0 0.0 10 0.1337405889506724 0.0 0.0 0.0 0.0 11 0.1864635543714368 0.0 0.0 0.0 0.0 12 0.20333490330608142 0.0 0.0 0.0 0.0 13 0.2161641582251341 0.0 0.0 0.0 0.0 14 0.23092658854294812 0.0 0.0 0.0 0.0 15 0.2449860459884853 0.0 0.0 0.0 0.0 16 0.25851827377981484 0.0 0.0 0.0 0.0 17 0.27169901513500594 0.0 0.0 0.0 0.0 18 0.28400104039985097 0.0 0.0 0.0 0.0 19 0.3117684688547869 0.0 0.0 0.0 0.0 20 0.32319177802928584 0.0 0.0 0.0 0.0 21 0.33848143800130753 0.0 0.0 0.0 0.0 22 0.3525408954468447 0.0 0.0 0.0 0.0 23 0.37239987908866595 0.0 0.0 0.0 0.0 24 0.39173163307627956 0.0 0.0 0.0 0.0 25 0.4040336583411246 0.0 0.0 0.0 0.0 26 0.4228381826745306 0.0 0.0 0.0 0.0 27 0.4386550723007599 0.0 0.0 0.0 0.0 28 0.45412047549085083 0.0 0.0 0.0 0.0 29 0.47134331086163384 0.0 0.0 0.0 0.0 30 0.4864572276155863 0.0 0.0 0.0 0.0 31 0.499286482534639 0.0 0.0 0.0 0.0 32 0.5175637772138373 0.0 0.0 0.0 0.0 33 0.5298658024786823 0.0 0.0 0.0 0.0 34 0.5530639072638187 0.0 0.0 0.0 0.0 35 0.5702867426346018 0.0 0.0 0.0 0.0 36 0.5857521458246926 0.0 0.0 0.0 0.0 37 0.6031507244135449 0.0 0.0 0.0 0.0 38 0.6179131547313589 0.0 0.0 0.0 0.0 39 0.635135990102142 0.0 0.0 0.0 0.0 40 0.6488439611115407 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAACT 35 1.0183612E-7 46.000004 33 CTCAACG 35 1.0183612E-7 46.000004 22 TTTACCG 35 1.0183612E-7 46.000004 15 TACGGTT 35 1.0183612E-7 46.000004 39 TGTGCGA 35 1.0183612E-7 46.000004 19 TCGGAAT 70 0.0 46.000004 33 TACGAGT 35 1.0183612E-7 46.000004 31 CGTAGCG 75 0.0 46.000004 12 CCATAAG 35 1.0183612E-7 46.000004 22 ACGCGAA 25 3.4149656E-5 46.0 39 TCACGCA 20 6.3087547E-4 46.0 25 CTATGTC 25 3.4149656E-5 46.0 15 CAGGTAA 40 5.6024874E-9 46.0 31 AACCGTT 30 1.8597348E-6 46.0 19 TAATAGT 25 3.4149656E-5 46.0 19 ACCGGTA 20 6.3087547E-4 46.0 38 CATATTG 30 1.8597348E-6 46.0 32 GATCGTA 20 6.3087547E-4 46.0 9 GGTCGTA 20 6.3087547E-4 46.0 17 ATAGGTA 30 1.8597348E-6 46.0 23 >>END_MODULE