##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527893_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 920758 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36207342211526 33.0 31.0 34.0 31.0 34.0 2 32.64360885270614 34.0 31.0 34.0 31.0 34.0 3 32.69122179769277 34.0 31.0 34.0 31.0 34.0 4 36.352252166150066 37.0 37.0 37.0 35.0 37.0 5 36.25862387293947 37.0 37.0 37.0 35.0 37.0 6 36.309727420234196 37.0 37.0 37.0 35.0 37.0 7 36.46905049969699 37.0 37.0 37.0 35.0 37.0 8 36.601670580108994 37.0 37.0 37.0 35.0 37.0 9 38.62737548845625 39.0 39.0 39.0 38.0 39.0 10 38.01439248966612 39.0 38.0 39.0 35.0 39.0 11 37.71733289311632 39.0 38.0 39.0 35.0 39.0 12 37.46904941363529 39.0 37.0 39.0 35.0 39.0 13 37.389918958075846 39.0 37.0 39.0 35.0 39.0 14 38.26712773606094 40.0 38.0 40.0 35.0 40.0 15 38.31142167648829 40.0 38.0 40.0 35.0 40.0 16 38.32023941144144 40.0 38.0 40.0 35.0 40.0 17 38.30490096203346 40.0 38.0 40.0 35.0 40.0 18 38.2805710078001 40.0 38.0 40.0 35.0 40.0 19 38.198525562634266 40.0 38.0 40.0 34.0 40.0 20 38.19875797983835 40.0 38.0 40.0 34.0 40.0 21 38.15600516096521 40.0 38.0 40.0 34.0 40.0 22 38.12589953060413 40.0 38.0 40.0 34.0 40.0 23 38.037514743287595 40.0 38.0 40.0 34.0 40.0 24 37.96821531824866 40.0 38.0 40.0 34.0 40.0 25 37.84735620000043 40.0 37.0 40.0 34.0 40.0 26 37.66008658083883 40.0 37.0 40.0 33.0 40.0 27 37.55447794100078 40.0 37.0 40.0 33.0 40.0 28 37.34396985961566 40.0 37.0 40.0 33.0 40.0 29 37.24742657679868 40.0 36.0 40.0 33.0 40.0 30 37.18733478286369 40.0 36.0 40.0 33.0 40.0 31 37.0296418820146 39.0 36.0 40.0 32.0 40.0 32 36.754798763627356 39.0 35.0 40.0 31.0 40.0 33 36.62440293757969 39.0 35.0 40.0 31.0 40.0 34 36.504357279545765 39.0 35.0 40.0 31.0 40.0 35 36.36035310038034 39.0 35.0 40.0 31.0 40.0 36 36.228127260365916 39.0 35.0 40.0 30.0 40.0 37 36.00655655449097 38.0 35.0 40.0 30.0 40.0 38 35.94719350795757 38.0 35.0 40.0 30.0 40.0 39 35.778029623418966 38.0 35.0 40.0 30.0 40.0 40 35.50943570406122 38.0 35.0 40.0 28.0 40.0 41 35.336034006763995 38.0 34.0 40.0 28.0 40.0 42 35.20751163715113 38.0 34.0 40.0 28.0 40.0 43 35.02640215995951 37.0 34.0 40.0 27.0 40.0 44 34.8936973667348 37.0 34.0 40.0 27.0 40.0 45 34.77840322864422 37.0 34.0 40.0 27.0 40.0 46 34.509041463663635 36.0 34.0 40.0 26.0 40.0 47 34.271444831323755 36.0 33.0 39.0 26.0 40.0 48 33.91622011429713 35.0 33.0 39.0 24.0 40.0 49 34.1596565004051 35.0 33.0 39.0 26.0 40.0 50 34.200468527017954 35.0 33.0 39.0 26.0 40.0 51 34.12580069898931 35.0 33.0 39.0 26.0 40.0 52 33.60705744614763 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 4.0 15 10.0 16 25.0 17 45.0 18 141.0 19 337.0 20 660.0 21 1064.0 22 1952.0 23 3024.0 24 4294.0 25 5935.0 26 8179.0 27 10831.0 28 12735.0 29 14448.0 30 15964.0 31 19267.0 32 24241.0 33 31843.0 34 48768.0 35 66232.0 36 101839.0 37 173194.0 38 259472.0 39 116252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 98.79012726471016 0.8705870597920409 0.09101197057207214 0.24827370492572423 8 97.97699286891887 1.5397096739859986 0.26467323661591863 0.21862422047921387 9 94.25712293566822 3.6570955669133474 0.906970126786843 1.1788113706315884 10 48.52534542192411 35.27408939156651 7.080362049528757 9.120203136980617 11 29.341260135670826 34.15327371578634 19.027040764239896 17.478425384302934 12 25.9388460377211 24.400113819266302 25.743463537650502 23.917576605362104 13 22.787529405120562 22.54707534444447 26.9779898735607 27.68740537687427 14 22.556089656565568 25.21194494101599 24.597559836569435 27.634405565849008 15 24.59451886380569 24.476681169210586 23.981545639570875 26.94725432741285 16 27.086487437524298 24.51284702386512 22.638738952037343 25.761926586573235 17 27.387760953475286 25.185336429333223 20.151983474485153 27.274919142706334 18 27.36984093540322 25.205754389318365 22.466598172375367 24.957806502903043 19 28.76304088587881 21.63641260787308 22.38872754838948 27.211818957858636 20 27.246355719961162 22.46171089471935 22.706509202200795 27.58542418311869 21 30.387680584909386 20.908642661806905 24.67586488523586 24.027811868047845 22 27.349640187758347 20.737805156186536 22.917856809281048 28.99469784677407 23 24.34548491568903 24.716157774355477 24.83975159596767 26.098605713987823 24 25.31892201859772 22.9399038618182 27.91222014905111 23.82895397053297 25 23.447746313363556 24.89405468103454 24.74537283412145 26.912826171480454 26 25.42068600001303 24.789032514515213 23.891076699849474 25.89920478562228 27 25.720221817241878 22.0994007111532 25.000380121595466 27.17999735000945 28 28.81093620690779 25.526577015893427 22.965752130310026 22.696734646888757 29 28.73773564823765 24.86245028552562 20.951650705179865 25.44816336105687 30 28.238147265622455 23.76813451525808 20.92167540222295 27.072042816896513 31 28.50325492691891 26.58820232895071 19.352424849960574 25.556117894169805 32 28.70200421826365 26.20112993859407 21.096965760818804 23.999900082323478 33 28.153325846748007 26.804220001346717 20.460424997664965 24.582029154240313 34 26.85743702471225 26.09969177568916 23.879238627304893 23.163632572293697 35 25.7882092797456 26.40737305567804 24.38034749630196 23.4240701682744 36 25.711641929801317 27.29511989035121 21.49750531627203 25.495732863575444 37 27.199763672973788 25.471079262955087 22.58639077803288 24.742766286038243 38 27.87160144142109 26.144871942464796 22.03249931035082 23.951027305763294 39 26.85396162726797 26.091763525269396 20.956320770495612 26.09795407696702 40 25.22541210611257 23.75759971675511 25.45402809424409 25.56296008288823 41 24.181055174106554 23.704274087219442 26.050384574448444 26.064286164225564 42 24.201907558772227 20.710219188972566 26.362518707412807 28.725354544842403 43 22.371459167338216 22.794806018519523 28.010291520681875 26.823443293460386 44 22.244389948281743 23.23205445947795 25.008416978185366 29.51513861405494 45 24.09297557012809 22.31292044163613 26.91423805169219 26.679865936543585 46 23.26941498200396 21.598183235986003 25.00591903627229 30.126482745737746 47 26.121956040566573 23.108677850206025 23.305580836658493 27.463785272568902 48 27.996172718564488 23.004633139217905 25.205102752297563 23.794091389920045 49 25.696219853642326 22.506239424474185 26.828764995796938 24.96877572608655 50 24.032156114853198 24.533264983850263 24.579531212327236 26.855047688969307 51 26.09534752888381 24.75721090666603 23.407562030414073 25.739879534036085 52 27.283281817806632 24.66543869290302 22.84628534316292 25.20499414612743 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 11.0 6 22.0 7 80.0 8 138.0 9 144.0 10 150.0 11 555.5 12 961.0 13 1022.0 14 1109.0 15 1135.0 16 1132.0 17 1129.0 18 1468.5 19 1808.0 20 1833.5 21 1859.0 22 2443.5 23 3028.0 24 3842.5 25 4657.0 26 5707.5 27 6758.0 28 6988.5 29 7219.0 30 8478.0 31 9737.0 32 11291.5 33 12846.0 34 12602.0 35 12358.0 36 14300.5 37 16243.0 38 17964.5 39 24524.0 40 29362.0 41 27667.5 42 25973.0 43 27102.0 44 28231.0 45 30285.5 46 32340.0 47 34833.0 48 37326.0 49 36717.5 50 36109.0 51 42091.0 52 48073.0 53 49285.0 54 50497.0 55 58114.0 56 65731.0 57 71119.0 58 76507.0 59 98584.0 60 120661.0 61 93522.0 62 66383.0 63 57902.5 64 47466.5 65 45511.0 66 40668.0 67 35825.0 68 28164.0 69 20503.0 70 19313.0 71 18123.0 72 15308.0 73 12493.0 74 10858.0 75 9223.0 76 8379.0 77 7535.0 78 4795.0 79 2055.0 80 1760.5 81 1466.0 82 943.5 83 421.0 84 255.0 85 89.0 86 70.5 87 52.0 88 37.5 89 13.5 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 920758.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.864310221243164 #Duplication Level Percentage of deduplicated Percentage of total 1 74.35099976175003 8.077723266712288 2 8.971999971250169 1.9494918198529314 3 3.746000307726734 1.2209312829604677 4 1.8829999946734048 0.8182998435492438 5 1.0989999964801862 0.5969938447452944 6 0.6559999978979216 0.427619248937873 7 0.47399999848111674 0.36047781198573486 8 0.3199999989745936 0.2781263407725983 9 0.2629999991572441 0.25715822211278916 >10 3.507999988758982 10.315662522014927 >50 2.5829999917230473 20.365366730666057 >100 2.0429999934534213 39.77021979774987 >500 0.07399999976287477 5.254197692361094 >1k 0.024999999919890124 5.47713333738663 >5k 9.99999996795605E-4 0.776798178329718 >10k+ 0.00199999999359121 4.053800059862485 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCTACCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 19967 2.1685393990603394 No Hit TCTACCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 17346 1.8838826271398128 No Hit TCTACCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 7150 0.776534116456224 No Hit TCTACCGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 4417 0.47971345348071914 No Hit TCTACCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 4109 0.44626275307952795 No Hit TCTACCGGGGCTGGCCTGCACTTAAGAGCCCTAGACCCATTTCCTCAAGGTA 3687 0.40043094928309064 No Hit TCTACCGGGACAAACACCTCAGCCTTCAGAGGAGACTGAGCTCCTCAGACGA 3544 0.3849002669539662 No Hit TCTACCGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 3196 0.3471053197474255 No Hit TCTACCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCTACCGGGAAG 2739 0.2974722999963074 No Hit TCTACCGGGAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAAC 2518 0.2734703363967514 No Hit TCTACCAAAGCTGTGCTCAGCCAATTTCAAGCAGATTTGGACAATTTGGAGA 2234 0.2426261840787699 No Hit TCTACCGGGGACAAACACCTCAGCCTTCAGAGGAGACTGAGCTCCTCAGACG 2188 0.23763030025261794 No Hit TCTACCGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 2147 0.23317744727713471 No Hit TCTACCGGGGCTTACACAGTATGGCCGGCGACATTAGCTAGCGCTCGCTCAA 1989 0.21601767239600414 No Hit TCTACCGGGTATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1903 0.20667754176450273 No Hit TCTACCGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1670 0.18137230412334185 No Hit TCTACCGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 1380 0.14987651478455793 No Hit TCTACCGGGCATATTCGTAGGAGTAAACATAACATTCTTCCCTCAACATTTC 1362 0.14792160372215066 No Hit TCTACCGGGGTATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1297 0.14086220266345773 No Hit TCTACCGGGGACTGTCGAGTCGCGTCCACCCGCGAGCACAGCTTCTTTGCAG 1264 0.13727819904904437 No Hit TCTACCGGGGAGTGCAGTGCTTCTACCGGGGGAGGAGCGGAGGGGCTGGGGC 1227 0.13325977075409606 No Hit TCTACCGGGGAGAGGAGACTGAGCTCCTCAGACGACAAGAGTGGACCCGTGT 1120 0.12163891054978615 No Hit TCTACCGGGGATAGCAGCAGTGTTCTGGGCAGCTCAGCCTCACGTTGTTCCC 1111 0.12066145501858253 No Hit TCTACCGGGGCCATTACTGCCGGAAAAGGTCCAGCAGAGCTCAGCAGCCAAG 1095 0.11892375629644271 No Hit TCTACCGGGAGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCTTCA 1083 0.11762048225483787 No Hit TCTACCGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATT 1078 0.11707745140416917 No Hit TCTACCGGGGGCTGGCCTGCACTTAAGAGCCCTAGACCCATTTCCTCAAGGT 1034 0.11229877991828473 No Hit TCTACCGGGGTGGACTCAGGGCATGGACGCGACCATCCTCCTCTTAGGAGTG 1022 0.11099550587667986 No Hit TCTACCGGGATGGTCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGGTGACA 986 0.10708568375186532 No Hit TCTACCGGGAAGCCAGCACTGCTGTGCGGGGCTCTGGCTGCGCCTGGTCTGG 937 0.10176398141531218 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.008797099780832748 0.0 0.0 0.0 0.0 8 0.018028624242200447 0.0 0.0 0.0 0.0 9 0.0210695970059451 0.0 0.0 0.0 0.0 10 0.03627446082466837 0.0 0.0 0.0 0.0 11 0.053868660386333866 0.0 0.0 0.0 0.0 12 0.07613292526375008 0.0 0.0 0.0 0.0 13 0.09861440248143377 0.0 0.0 0.0 0.0 14 0.12706921905647303 0.0 0.0 0.0 0.0 15 0.15921664541605937 0.0 0.0 0.0 0.0 16 0.2011386270876821 0.0 0.0 0.0 0.0 17 0.23589260153047814 0.0 0.0 0.0 0.0 18 0.2659765106575235 0.0 0.0 0.0 0.0 19 0.2961690259547025 0.0 0.0 0.0 0.0 20 0.32647014742201536 0.0 0.0 0.0 0.0 21 0.35742290591013054 0.0 0.0 0.0 0.0 22 0.38881008907878073 0.0 0.0 0.0 0.0 23 0.4267136424554552 0.0 0.0 0.0 0.0 24 0.47048192901935143 0.0 0.0 0.0 0.0 25 0.5048014787816125 0.0 0.0 0.0 0.0 26 0.551393525768986 0.0 0.0 0.0 0.0 27 0.5863647125520495 0.0 0.0 0.0 0.0 28 0.6407764037890521 0.0 0.0 0.0 0.0 29 0.6619546069651309 0.0 0.0 0.0 0.0 30 0.690083605029769 0.0 0.0 0.0 0.0 31 0.7171265413930696 0.0 0.0 0.0 0.0 32 0.7502514232838596 0.0 0.0 0.0 0.0 33 0.775339448584753 0.0 0.0 0.0 0.0 34 0.8036856589896585 0.0 0.0 0.0 0.0 35 0.8509293429978344 0.0 0.0 0.0 0.0 36 0.8726505770245819 0.0 0.0 0.0 0.0 37 0.8979558146657428 0.0 0.0 0.0 0.0 38 0.9235868708173048 0.0 0.0 0.0 0.0 39 0.9432445876115114 0.0 0.0 0.0 0.0 40 0.962467879725183 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 20 6.310796E-4 46.000004 39 GTACCGT 20 6.310796E-4 46.000004 46 CGAACCC 20 6.310796E-4 46.000004 29 CCGATTA 20 6.310796E-4 46.000004 27 CGACGCC 20 6.310796E-4 46.000004 36 ACATTCG 20 6.310796E-4 46.000004 25 CGTCTCG 40 5.6097633E-9 46.000004 42 ATTCGCA 20 6.310796E-4 46.000004 27 GTAGGTA 20 6.310796E-4 46.000004 10 TAGTTCG 20 6.310796E-4 46.000004 37 ATCCGAT 40 5.6097633E-9 46.000004 11 TAGCACG 20 6.310796E-4 46.000004 28 CGTAGTA 20 6.310796E-4 46.000004 41 CGAATTC 20 6.310796E-4 46.000004 34 TGTTACG 20 6.310796E-4 46.000004 30 CGAATCT 20 6.310796E-4 46.000004 44 CCCCATA 20 6.310796E-4 46.000004 29 GCGATAC 20 6.310796E-4 46.000004 9 TACTCGA 20 6.310796E-4 46.000004 44 CTATTAC 40 5.6097633E-9 46.000004 20 >>END_MODULE