##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527889_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2561099 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97035881861654 33.0 31.0 33.0 31.0 34.0 2 31.132188954819785 31.0 31.0 33.0 30.0 33.0 3 31.872962349366425 31.0 31.0 34.0 30.0 34.0 4 36.298175900267815 37.0 37.0 37.0 35.0 37.0 5 36.189096946271896 37.0 37.0 37.0 35.0 37.0 6 36.15226627318975 37.0 37.0 37.0 35.0 37.0 7 36.574750527019845 37.0 37.0 37.0 35.0 37.0 8 36.63684886839595 37.0 37.0 37.0 35.0 37.0 9 38.48172874223136 39.0 39.0 39.0 37.0 39.0 10 37.84519770614099 39.0 38.0 39.0 35.0 39.0 11 37.12263368186861 39.0 35.0 39.0 34.0 39.0 12 36.987980160079715 39.0 37.0 39.0 33.0 39.0 13 36.75482907923512 39.0 35.0 39.0 33.0 39.0 14 37.7013774164919 40.0 37.0 40.0 33.0 40.0 15 37.78956963397354 40.0 37.0 40.0 33.0 40.0 16 37.85805195347778 40.0 37.0 40.0 34.0 40.0 17 37.801153723460125 40.0 37.0 40.0 33.0 40.0 18 37.78529529705802 40.0 37.0 40.0 33.0 40.0 19 37.72119859482199 40.0 37.0 40.0 33.0 40.0 20 37.720272820379066 40.0 36.0 40.0 33.0 40.0 21 37.7596211626337 40.0 37.0 40.0 33.0 40.0 22 37.66059765749001 40.0 36.0 40.0 33.0 40.0 23 37.6823188014208 40.0 36.0 40.0 34.0 40.0 24 37.616595453748566 40.0 36.0 40.0 34.0 40.0 25 37.47915640902597 40.0 36.0 40.0 33.0 40.0 26 37.24612207493736 40.0 35.0 40.0 33.0 40.0 27 37.11922264621555 39.0 35.0 40.0 33.0 40.0 28 37.02762876405793 39.0 35.0 40.0 33.0 40.0 29 36.964270416723444 39.0 35.0 40.0 33.0 40.0 30 36.763991161606796 39.0 35.0 40.0 32.0 40.0 31 36.67736897324156 39.0 35.0 40.0 32.0 40.0 32 36.512900906993444 39.0 35.0 40.0 31.0 40.0 33 36.242723143463024 39.0 35.0 40.0 31.0 40.0 34 36.088724801345045 39.0 35.0 40.0 30.0 40.0 35 35.959542758792225 38.0 35.0 40.0 30.0 40.0 36 35.82547531352751 38.0 35.0 40.0 30.0 40.0 37 35.70745020008988 38.0 35.0 40.0 29.0 40.0 38 35.32183293187807 38.0 35.0 40.0 27.0 40.0 39 35.346726932461415 38.0 34.0 40.0 27.0 40.0 40 35.20730045968547 38.0 34.0 40.0 27.0 40.0 41 34.87365541121214 38.0 34.0 40.0 25.0 40.0 42 34.907668543855586 38.0 34.0 40.0 26.0 40.0 43 34.92524498272031 38.0 34.0 40.0 26.0 40.0 44 34.839162406451294 38.0 34.0 40.0 26.0 40.0 45 34.71356632445681 38.0 34.0 40.0 25.0 40.0 46 34.40749928058228 37.0 34.0 40.0 23.0 40.0 47 34.18442941877686 37.0 33.0 40.0 23.0 40.0 48 34.19906610404362 37.0 33.0 40.0 23.0 40.0 49 34.150548260727135 36.0 33.0 40.0 24.0 40.0 50 33.98282065628857 36.0 33.0 40.0 23.0 40.0 51 34.24228934531621 36.0 34.0 40.0 24.0 40.0 52 33.971509496509114 36.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 9.0 15 30.0 16 94.0 17 239.0 18 519.0 19 1118.0 20 2133.0 21 3824.0 22 6296.0 23 10349.0 24 15011.0 25 20394.0 26 28350.0 27 37063.0 28 42758.0 29 44384.0 30 48434.0 31 60292.0 32 79801.0 33 118264.0 34 222627.0 35 173964.0 36 225815.0 37 360378.0 38 792141.0 39 266809.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 99.28714196522664 0.5097811525442788 0.15540203639140854 0.047674845837665784 8 98.07816878613438 1.6043893656590393 0.16543679100261255 0.15200505720395815 9 90.71917953972103 4.358363343236634 3.2116681159143003 1.7107890011280313 10 39.2589665608397 46.72646391256254 6.389522622905244 7.625046903692516 11 31.246742121253412 26.409678032750783 25.360558104157626 16.983021741838172 12 30.307145487152194 21.592253950354905 25.281060982023735 22.81953958046917 13 25.29378989254222 21.54664852861994 27.760387240009077 25.39917433882876 14 24.241897716566207 24.219329280125447 28.469731158381617 23.06904184492673 15 26.10129479571075 24.6115827619315 26.503075437536776 22.784047004820977 16 29.505692673340622 25.72708044476219 23.884160666963673 20.88306621493351 17 28.039798539611315 26.75339766248786 23.02347546892955 22.183328328971275 18 27.864678405637576 25.727158536237766 23.987553780623085 22.420609277501573 19 26.408858072257264 27.355053436044447 24.353880892538708 21.882207599159578 20 27.902084222437324 27.835862651150933 23.33603659991277 20.926016526498977 21 26.84039156627682 26.878148794716644 25.43259749037425 20.848862148632286 22 25.95987113344701 25.424983571505827 25.97213149511206 22.643013799935105 23 25.382150397153723 26.0328866631083 26.924339902518412 21.66062303721957 24 26.056821700371597 27.66218720947531 23.990677439646028 22.29031365050707 25 25.433925045459 27.77846541660436 22.663668995224313 24.123940542712326 26 25.574294472802496 28.13464063669542 23.726845389420713 22.56421950108137 27 24.57339603037602 25.376254490747918 23.799743781868642 26.25060569700742 28 24.417993993984613 28.212575929317847 23.529273956219576 23.840156120477968 29 27.920474764934898 26.58171355343936 23.27594520945891 22.22186647216683 30 25.930157326991264 25.70388727651684 24.441499528132262 23.924455868359637 31 27.835667422461995 26.760777306929562 23.262982024513697 22.140573246094743 32 28.698109678696525 26.536381451868905 23.89868568142036 20.86682318801421 33 29.282155824511275 25.716108592444105 23.717123000711805 21.28461258233282 34 26.0319886111392 26.659922166226295 26.111173367370803 21.196915855263697 35 24.44852776093388 29.155257176704218 26.52076315675419 19.87545190560771 36 25.87276009244469 29.41292000035922 23.558675396773026 21.155644510423063 37 27.005281716950417 28.632278564788006 23.024295429423074 21.338144288838503 38 27.1663844310587 27.78486891760139 23.51670122865223 21.53204542268768 39 27.03624498701534 26.272588447381377 22.890641868978904 23.80052469662438 40 26.358879527890178 26.008092619613688 23.189966494852403 24.44306135764373 41 24.552311331971158 27.0635379577283 23.975527693384755 24.408623016915783 42 24.272939078106702 26.231434239754105 24.27356380991129 25.2220628722279 43 23.928165213449383 25.636767653261355 25.044639039724743 25.39042809356452 44 24.711696033616818 25.56769574311653 24.344509915469885 25.376098307796767 45 25.67530579645691 24.302574793086873 25.03097303149937 24.991146378956845 46 25.21706501779119 26.41186459406684 24.137957962577783 24.233112425564183 47 24.91004838157369 25.989897305805048 24.83707189765019 24.262982414971074 48 25.524159745484265 25.399525750468843 24.772490247350845 24.303824256696053 49 26.06349852153314 25.058226956474545 24.992825345681677 23.88544917631064 50 24.205468043211138 25.657071436910485 25.32108286325519 24.816377656623192 51 22.89782628473167 26.089581074374713 25.847224179932134 25.165368460961485 52 23.896225799939792 25.567227194263086 25.763783438281767 24.77276356751535 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 22.0 4 44.0 5 102.5 6 161.0 7 1444.0 8 2727.0 9 6401.5 10 10076.0 11 8408.5 12 6741.0 13 7540.5 14 7843.0 15 7346.0 16 8141.5 17 8937.0 18 9746.5 19 10556.0 20 11285.5 21 12015.0 22 14301.5 23 16588.0 24 19956.5 25 23325.0 26 27091.0 27 30857.0 28 34424.0 29 37991.0 30 42923.5 31 47856.0 32 51980.5 33 56105.0 34 57954.0 35 59803.0 36 65707.0 37 71611.0 38 78327.5 39 89036.5 40 93029.0 41 96953.0 42 100877.0 43 108052.0 44 115227.0 45 114607.5 46 113988.0 47 121984.5 48 129981.0 49 134838.0 50 139695.0 51 149329.5 52 158964.0 53 163740.5 54 168517.0 55 178571.5 56 188626.0 57 187076.5 58 185527.0 59 179656.0 60 173785.0 61 165886.0 62 157987.0 63 131497.5 64 95316.5 65 85625.0 66 67068.0 67 48511.0 68 40339.5 69 32168.0 70 29841.5 71 27515.0 72 24084.5 73 20654.0 74 15560.5 75 10467.0 76 7866.5 77 5266.0 78 3742.0 79 2218.0 80 1639.0 81 1060.0 82 629.0 83 198.0 84 128.5 85 59.0 86 38.0 87 17.0 88 10.0 89 2.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2561099.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.421096085496595 #Duplication Level Percentage of deduplicated Percentage of total 1 74.31242430127867 9.230417625923746 2 8.680630500051102 2.156458910476542 3 3.5814764718008303 1.3345759015255034 4 1.8017876461953586 0.8952070991621317 5 1.031664866486097 0.6407204217327412 6 0.6013237471522391 0.4481460025121293 7 0.43135722553563655 0.3750550681885957 8 0.28659956554205457 0.2847904593327551 9 0.24948738471518117 0.27890160998998675 >10 4.404718962213443 15.53733225740175 >50 3.0406147156947947 26.695808991310415 >100 1.5135769257512803 32.85108125559132 >500 0.04792501217935206 3.985529826039823 >1k 0.014771407863498922 3.3414845152252437 >5k 9.847605242332613E-4 0.921054923480712 >10k+ 6.565070161555076E-4 1.0234351321066557 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 13799 0.5387921357198608 No Hit GTAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 11302 0.4412949284662561 No Hit GTAATGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 9488 0.37046596012102617 No Hit GTAATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7514 0.2933896737299105 No Hit GTAATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5588 0.2181875827525605 No Hit GTAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 4633 0.18089890316617985 No Hit GTAATGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTAATGGGGAAG 3471 0.13552775585793442 No Hit GTAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3327 0.12990516961663723 No Hit GTAATGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3203 0.12506349813107576 No Hit GTAATGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3104 0.12119797009018393 No Hit GTAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 2926 0.11424782876413601 No Hit GTAATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2778 0.10846905957169169 No Hit GTAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 2699 0.10538444628653558 No Hit GTAATGGGGAACAGACACTGTTGACTTTGCAACTAAGTTATGACCTGGTACG 2632 0.10276838185482091 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.10967947744308205 0.0 0.0 0.0 0.0 8 0.14724147719397024 0.0 0.0 0.0 0.0 9 0.20237405894891217 0.0 0.0 0.0 0.0 10 0.2887432309332829 0.0 0.0 0.0 0.0 11 0.3343096069304623 0.0 0.0 0.0 0.0 12 0.36702993519578897 0.0 0.0 0.0 0.0 13 0.384912883102137 0.0 0.0 0.0 0.0 14 0.41447050660673407 0.0 0.0 0.0 0.0 15 0.44590232552509684 0.0 0.0 0.0 0.0 16 0.47979402592402715 0.0 0.0 0.0 0.0 17 0.512865765829435 0.0 0.0 0.0 0.0 18 0.5455080026191881 0.0 0.0 0.0 0.0 19 0.5881849940201452 0.0 0.0 0.0 0.0 20 0.6262936341000485 0.0 0.0 0.0 0.0 21 0.6642460912288045 0.0 0.0 0.0 0.0 22 0.7050879329537827 0.0 0.0 0.0 0.0 23 0.7463592777944156 0.0 0.0 0.0 0.0 24 0.7896219552621746 0.0 0.0 0.0 0.0 25 0.8281600984577324 0.0 0.0 0.0 0.0 26 0.869119077396071 0.0 0.0 0.0 0.0 27 0.9013708568079563 0.0 0.0 0.0 0.0 28 0.9415489209905591 0.0 0.0 0.0 0.0 29 0.9656401412050062 0.0 0.0 0.0 0.0 30 0.9919960142110867 0.0 0.0 0.0 0.0 31 1.0113627001533325 0.0 0.0 0.0 0.0 32 1.0324083528204102 0.0 0.0 0.0 0.0 33 1.0507988953179865 0.0 0.0 0.0 0.0 34 1.0710636332293284 0.0 0.0 0.0 0.0 35 1.101987857556463 0.0 0.0 0.0 0.0 36 1.1219792753032976 0.0 0.0 0.0 0.0 37 1.1407212294409548 0.0 0.0 0.0 0.0 38 1.1585260858717292 0.0 0.0 0.0 0.0 39 1.1747300670532455 0.0 0.0 0.0 0.0 40 1.1940186615199178 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 20 6.312914E-4 46.0 38 CGTAACA 20 6.312914E-4 46.0 29 AATCGCG 25 3.418339E-5 46.0 19 AATGGGG 236450 0.0 44.150856 3 TAATGGG 259780 0.0 44.13365 2 GTAATGG 264860 0.0 44.124294 1 ATGGGGG 95820 0.0 44.022125 4 ATGGGGA 109880 0.0 44.011467 4 TGGGGGG 35545 0.0 43.20467 5 TGGGGAG 30340 0.0 43.111736 5 TGGGGAC 18300 0.0 43.071583 5 ATGGGGT 14145 0.0 43.056908 4 ATGGGGC 18105 0.0 42.874897 4 TGGGGAT 36205 0.0 42.734707 5 TACGTTA 70 0.0 42.714287 28 TGGGGGA 24775 0.0 42.676487 5 AATGGGT 8540 0.0 42.63349 3 TGGGGGC 18885 0.0 42.492455 5 TGGGGGT 19580 0.0 42.017876 5 ATGGGTA 4470 0.0 41.93512 4 >>END_MODULE