##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527885_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 793971 Sequences flagged as poor quality 0 Sequence length 50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.62635033269477 34.0 31.0 34.0 31.0 34.0 2 32.90825609499591 34.0 31.0 34.0 31.0 34.0 3 33.216220743578795 34.0 34.0 34.0 31.0 34.0 4 36.438853560142626 37.0 37.0 37.0 35.0 37.0 5 36.46983454055627 37.0 37.0 37.0 35.0 37.0 6 36.370534943971506 37.0 37.0 37.0 35.0 37.0 7 36.65825200164741 37.0 37.0 37.0 35.0 37.0 8 36.71829575639413 37.0 37.0 37.0 35.0 37.0 9 38.673820580348654 39.0 39.0 39.0 39.0 39.0 10 38.20919907654058 39.0 39.0 39.0 37.0 39.0 11 37.264158262707326 39.0 35.0 39.0 35.0 39.0 12 37.0575424039417 39.0 35.0 39.0 34.0 39.0 13 36.99594569574959 39.0 35.0 39.0 33.0 39.0 14 37.82688410533886 40.0 36.0 40.0 34.0 40.0 15 37.93179599758681 40.0 36.0 40.0 34.0 40.0 16 37.97966928263123 40.0 36.0 40.0 34.0 40.0 17 37.87181773641606 40.0 36.0 40.0 34.0 40.0 18 37.8517729236962 40.0 36.0 40.0 34.0 40.0 19 37.827358933764586 40.0 36.0 40.0 34.0 40.0 20 37.705334325812906 40.0 36.0 40.0 34.0 40.0 21 37.7213009039373 40.0 36.0 40.0 34.0 40.0 22 37.749471958043806 40.0 36.0 40.0 34.0 40.0 23 37.67791518833811 40.0 35.0 40.0 34.0 40.0 24 37.62011584805994 40.0 35.0 40.0 34.0 40.0 25 37.569603927599374 40.0 35.0 40.0 34.0 40.0 26 37.466622836350446 40.0 35.0 40.0 34.0 40.0 27 37.34100741714748 40.0 35.0 40.0 33.0 40.0 28 37.19940148947506 40.0 35.0 40.0 33.0 40.0 29 37.22528656588213 40.0 35.0 40.0 33.0 40.0 30 37.36976791343764 40.0 35.0 40.0 33.0 40.0 31 37.41732254704517 40.0 35.0 40.0 34.0 40.0 32 37.39489477575378 40.0 35.0 40.0 34.0 40.0 33 37.328874732200546 40.0 35.0 40.0 33.0 40.0 34 37.033937007774846 40.0 35.0 40.0 33.0 40.0 35 37.03708069942101 40.0 35.0 40.0 33.0 40.0 36 36.984059871204366 40.0 35.0 40.0 33.0 40.0 37 36.931083125202306 40.0 35.0 40.0 33.0 40.0 38 36.869480119550964 39.0 35.0 40.0 33.0 40.0 39 36.7437400106553 39.0 35.0 40.0 33.0 40.0 40 36.5243717969548 39.0 35.0 40.0 32.0 40.0 41 36.427602519487486 39.0 35.0 40.0 32.0 40.0 42 36.33488502728689 39.0 35.0 40.0 32.0 40.0 43 36.261573785440525 38.0 35.0 40.0 32.0 40.0 44 35.95242647401479 38.0 35.0 40.0 31.0 40.0 45 35.94605470476881 38.0 35.0 40.0 31.0 40.0 46 35.77675381090745 37.0 35.0 40.0 31.0 40.0 47 35.69419537993201 37.0 35.0 40.0 31.0 40.0 48 35.58215728282267 37.0 35.0 40.0 30.0 40.0 49 35.52821576606702 36.0 35.0 40.0 30.0 40.0 50 35.03838175449733 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 1.0 14 2.0 15 9.0 16 36.0 17 61.0 18 128.0 19 258.0 20 450.0 21 664.0 22 1088.0 23 1602.0 24 2108.0 25 3052.0 26 3927.0 27 5054.0 28 6619.0 29 8478.0 30 11027.0 31 14160.0 32 18048.0 33 26190.0 34 63001.0 35 79968.0 36 52876.0 37 97898.0 38 222806.0 39 174457.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 100.0 0.0 0.0 0.0 7 98.83648143320096 0.7446115790123318 0.2399331965525189 0.17897379123418866 8 98.67954874926163 0.9187993012339241 0.23502117835538075 0.16663077114907218 9 93.77773243607133 2.6785613076548134 2.4709970515295896 1.072709204744254 10 52.829259506959325 32.6226020849628 6.952898783456826 7.59523962462105 11 34.20641308057851 24.518149907238428 23.073008963803467 18.202428048379602 12 29.53646921613006 17.63439722609516 26.388999094425365 26.44013446334942 13 23.429445156057337 19.0869691714181 29.736854368736388 27.746731303788174 14 24.024806951387394 19.97730395694553 30.192664467593904 25.80522462407317 15 25.736708267682324 20.16144166474594 27.668516860187587 26.433333207384145 16 30.105507631890838 19.844805414807343 25.07207442085416 24.97761253244766 17 28.059715027375056 20.54206010043188 25.405713810705933 25.992511061487132 18 28.646512278156255 20.34431988070093 24.191185824167384 26.817982016975435 19 28.274962183757342 21.510105532821726 23.88261032203947 26.33232196138146 20 29.982203380224213 20.95668481594416 23.830089512085454 25.231022291746175 21 30.94571464197055 19.41179211835193 26.521245738194466 23.12124750148305 22 29.1042116147819 18.479768152741094 25.868954911451425 26.54706532102558 23 28.34335259096365 20.69735544497217 24.68301738980391 26.276274574260267 24 28.271057759036538 21.11714407705067 25.10091678411428 25.510881379798505 25 28.256321704445124 21.639329396161823 23.28447764464949 26.81987125474356 26 28.047623905659023 21.868808810397358 24.363484308620844 25.72008297532278 27 28.198007232002176 19.90437937909571 23.716861195182194 28.180752193719922 28 28.463004316278557 22.681432949062373 22.408375116975304 26.44718761768377 29 29.23796964876551 21.393224689566747 23.26571121615273 26.103094445515012 30 27.68614974602347 21.264252724595735 25.13026294411257 25.919334585268228 31 29.732446147277418 21.960247918374854 22.670601319191757 25.63670461515597 32 31.084006846597674 22.244641177070697 22.317817653289605 24.353534323042027 33 30.693186526963835 21.633661682857433 23.281077016666856 24.39207477351188 34 27.687787085422517 23.495946325495513 25.531537046063395 23.284729543018575 35 28.06235996025044 24.496360698312657 24.673445251778716 22.767834089658187 36 28.39398416314954 23.78411805972762 22.876150388364312 24.945747388758534 37 28.40305250443656 23.560306358796478 23.103992463200797 24.932648673566163 38 29.526393281366698 24.247862957211282 22.762544223907422 23.463199537514594 39 30.332216164066445 22.694279765885657 22.058866129871245 24.914637940176657 40 27.4100691335074 22.9810660590878 23.695071986256426 25.91379282114838 41 25.638971700477725 23.439521090820698 24.518527754792053 26.402979453909523 42 26.44983255055915 21.622200307064112 24.587421958736527 27.34054518364021 43 27.192302993434268 20.361952766536813 25.537330708552325 26.908413531476587 44 26.135337436757766 21.481515067930694 24.854308280781037 27.528839214530503 45 26.989272907952554 20.666875742313007 25.211626117326702 27.13222523240773 46 27.09670756236689 23.012805253592386 23.626051833127406 26.264435350913324 47 25.80887715042489 23.277298541130595 24.055160704862015 26.8586636035825 48 27.100360088718606 22.121714772957702 26.296930240525157 24.48099489779853 49 27.815373609363565 22.246404465654287 24.29421225712274 25.644009667859407 50 25.087314272183747 22.14224449003805 24.529485333847205 28.240955903931 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 5.0 6 10.0 7 8.5 8 7.0 9 53.0 10 99.0 11 334.5 12 570.0 13 838.0 14 1106.0 15 1545.5 16 1985.0 17 1667.0 18 1349.0 19 1477.0 20 1605.0 21 1850.0 22 2095.0 23 2229.5 24 2364.0 25 2482.0 26 2600.0 27 2876.5 28 3153.0 29 4052.5 30 4952.0 31 5450.0 32 5948.0 33 7146.0 34 8344.0 35 10932.5 36 13521.0 37 12645.0 38 11769.0 39 13555.0 40 15341.0 41 18027.5 42 20714.0 43 22076.5 44 23439.0 45 24528.5 46 25618.0 47 29282.0 48 32946.0 49 35322.5 50 37699.0 51 41560.0 52 45421.0 53 45821.0 54 46221.0 55 49585.0 56 52949.0 57 63340.5 58 73732.0 59 71537.0 60 69342.0 61 69749.5 62 70157.0 63 69545.0 64 68933.0 65 59930.0 66 50927.0 67 42449.5 68 33972.0 69 28022.5 70 22073.0 71 18729.5 72 15386.0 73 12717.0 74 10048.0 75 10257.0 76 10466.0 77 7827.0 78 5188.0 79 3186.5 80 1185.0 81 837.0 82 489.0 83 335.0 84 181.0 85 116.0 86 51.0 87 33.0 88 15.0 89 8.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 793971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.072660084562282 #Duplication Level Percentage of deduplicated Percentage of total 1 68.83487133318329 6.933502609037358 2 8.696576387325882 1.751953156979285 3 3.231050091279666 0.9763580785696203 4 1.5204941606021958 0.6126168336123108 5 0.840273088753845 0.4231892600611358 6 0.5551804336409333 0.3355286276199005 7 0.39762922949958734 0.2803628847905024 8 0.3626178508015105 0.29220210813745084 9 0.3101007827543952 0.28111857989775446 >10 9.565608822867432 28.380759498772623 >50 4.101332933203291 28.161481968484996 >100 1.5254957861304925 25.295508274231675 >500 0.03626178508015105 2.4390059586559207 >1k 0.021256908495260962 3.1021284152695756 >5k 0.001250406382074174 0.7342837458798873 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5830 0.7342837458798873 No Hit CTTCTGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3067 0.38628614899032837 No Hit CTTCTGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2052 0.2584477266801936 No Hit CTTCTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1880 0.23678446693896882 No Hit CTTCTGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 1676 0.21109083329239986 No Hit CTTCTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1624 0.20454147569621559 No Hit CTTCTGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1584 0.19950350831453545 No Hit CTTCTGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1423 0.17922568960327268 No Hit CTTCTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1353 0.17040924668533233 No Hit CTTCTGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1330 0.16751241544086623 No Hit CTTCTGGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 1181 0.14874598694410754 No Hit CTTCTGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 1163 0.14647890162235144 No Hit CTTCTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1128 0.14207068016338129 No Hit CTTCTGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 1094 0.1377884078889531 No Hit CTTCTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1025 0.1290979141555548 No Hit CTTCTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 1022 0.1287200666019288 No Hit CTTCTGGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 1020 0.1284681682328448 No Hit CTTCTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 1008 0.1269567780183407 No Hit CTTCTGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 932 0.11738463999314837 No Hit CTTCTGGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 927 0.11675489407043833 No Hit CTTCTGGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 908 0.11436185956414024 No Hit CTTCTGGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 886 0.11159097750421615 No Hit CTTCTGGGGGAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCATCC 872 0.1098276889206281 No Hit CTTCTGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 820 0.10327833132444385 No Hit CTTCTGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 812 0.10227073784810779 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0062974592271002345 0.0 0.0 0.0 0.0 8 0.008564544548856318 0.0 0.0 0.0 0.0 9 0.013602511930536505 0.0 0.0 0.0 0.0 10 0.03262083879637921 0.0 0.0 0.0 0.0 11 0.048238537679587794 0.0 0.0 0.0 0.0 12 0.056299285490276095 0.0 0.0 0.0 0.0 13 0.06347838900917036 0.0 0.0 0.0 0.0 14 0.07922203707692095 0.0 0.0 0.0 0.0 15 0.09320239656108346 0.0 0.0 0.0 0.0 16 0.107560603598872 0.0 0.0 0.0 0.0 17 0.12028147123761447 0.0 0.0 0.0 0.0 18 0.13325423724544094 0.0 0.0 0.0 0.0 19 0.1530282592185357 0.0 0.0 0.0 0.0 20 0.16562317767273615 0.0 0.0 0.0 0.0 21 0.1770845534660586 0.0 0.0 0.0 0.0 22 0.1909389637656791 0.0 0.0 0.0 0.0 23 0.20542311998800963 0.0 0.0 0.0 0.0 24 0.22116676805576022 0.0 0.0 0.0 0.0 25 0.23376168650996068 0.0 0.0 0.0 0.0 26 0.24963128376225327 0.0 0.0 0.0 0.0 27 0.2653749318300039 0.0 0.0 0.0 0.0 28 0.28099263071321245 0.0 0.0 0.0 0.0 29 0.2932097016137869 0.0 0.0 0.0 0.0 30 0.30819765457428544 0.0 0.0 0.0 0.0 31 0.3178957417840198 0.0 0.0 0.0 0.0 32 0.3313723045300143 0.0 0.0 0.0 0.0 33 0.3440931721687568 0.0 0.0 0.0 0.0 34 0.36109631208192744 0.0 0.0 0.0 0.0 35 0.3789810962868921 0.0 0.0 0.0 0.0 36 0.39333930332468064 0.0 0.0 0.0 0.0 37 0.4056823234097971 0.0 0.0 0.0 0.0 38 0.4170177500185775 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 25 4.441593E-5 44.0 35 AACCGAT 20 7.8550103E-4 44.0 44 GATACGA 25 4.441593E-5 44.0 9 CGTATGT 45 4.802132E-10 44.0 23 CGTATGA 20 7.8550103E-4 44.0 41 CGAAAGG 20 7.8550103E-4 44.0 30 TCCGATA 30 2.5267236E-6 44.0 29 CCGATAG 30 2.5267236E-6 44.0 30 CTATCAC 30 2.5267236E-6 44.0 44 ACCGATA 20 7.8550103E-4 44.0 26 TTCGTAA 45 4.802132E-10 44.0 42 TTATCGA 20 7.8550103E-4 44.0 43 ATCGTAA 20 7.8550103E-4 44.0 33 TTATAGT 20 7.8550103E-4 44.0 26 CGTTAGA 20 7.8550103E-4 44.0 29 TTATAGG 20 7.8550103E-4 44.0 24 CGAATCG 20 7.8550103E-4 44.0 30 TTAACCG 20 7.8550103E-4 44.0 18 TAGGCTA 20 7.8550103E-4 44.0 17 CGGTAGG 45 4.802132E-10 44.0 31 >>END_MODULE