##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527874_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 617581 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.947056337549245 31.0 31.0 34.0 30.0 34.0 2 32.35102601925901 34.0 31.0 34.0 31.0 34.0 3 32.66099993361195 34.0 31.0 34.0 31.0 34.0 4 35.70922032899328 37.0 35.0 37.0 35.0 37.0 5 36.10865133480466 37.0 35.0 37.0 35.0 37.0 6 36.119887107925926 37.0 35.0 37.0 35.0 37.0 7 36.30455438234013 37.0 35.0 37.0 35.0 37.0 8 36.44120690241442 37.0 37.0 37.0 35.0 37.0 9 38.41813948291803 39.0 39.0 39.0 37.0 39.0 10 37.435960627027065 39.0 37.0 39.0 34.0 39.0 11 37.43029983111527 39.0 37.0 39.0 34.0 39.0 12 37.2467190538569 39.0 37.0 39.0 34.0 39.0 13 36.881312734685814 39.0 37.0 39.0 33.0 39.0 14 37.88900889114141 40.0 38.0 40.0 33.0 40.0 15 38.0096084562187 40.0 38.0 40.0 33.0 40.0 16 37.306963782888396 40.0 37.0 40.0 32.0 40.0 17 37.791562564262826 40.0 37.0 40.0 33.0 40.0 18 37.887051253195935 40.0 37.0 40.0 33.0 40.0 19 36.90587145653768 40.0 36.0 40.0 31.0 40.0 20 37.4351234898742 40.0 37.0 40.0 32.0 40.0 21 37.64871652463402 40.0 37.0 40.0 33.0 40.0 22 37.57907707652923 40.0 37.0 40.0 32.0 40.0 23 37.61079275431077 40.0 37.0 40.0 33.0 40.0 24 37.62493826720706 40.0 37.0 40.0 33.0 40.0 25 37.41485408391774 40.0 37.0 40.0 32.0 40.0 26 36.841957573176636 40.0 36.0 40.0 31.0 40.0 27 36.76984719413324 40.0 36.0 40.0 30.0 40.0 28 36.61182419795946 39.0 35.0 40.0 30.0 40.0 29 36.601427181211854 39.0 35.0 40.0 30.0 40.0 30 36.058167268746935 39.0 35.0 40.0 29.0 40.0 31 35.99298229705901 39.0 35.0 40.0 29.0 40.0 32 34.89305694313782 38.0 34.0 40.0 24.0 40.0 33 35.03710444459917 38.0 34.0 40.0 25.0 40.0 34 34.884575464594924 38.0 34.0 40.0 24.0 40.0 35 35.09908821676833 38.0 34.0 40.0 25.0 40.0 36 34.70041824473227 38.0 33.0 40.0 24.0 40.0 37 34.02406809794991 38.0 33.0 40.0 18.0 40.0 38 33.84446898463521 38.0 32.0 40.0 20.0 40.0 39 33.90847678280258 38.0 33.0 40.0 21.0 40.0 40 33.478672433251674 37.0 32.0 40.0 15.0 40.0 41 33.07733398533958 37.0 31.0 40.0 15.0 40.0 42 33.178213060311116 37.0 31.0 40.0 15.0 40.0 43 33.25230536561196 37.0 31.0 40.0 18.0 40.0 44 32.730879026394916 36.0 31.0 40.0 14.0 40.0 45 32.655763373549384 36.0 31.0 40.0 15.0 40.0 46 32.49268840848407 36.0 31.0 39.0 14.0 40.0 47 32.38744553346039 35.0 31.0 39.0 14.0 40.0 48 32.40783314253515 35.0 30.0 39.0 17.0 40.0 49 32.32783068131953 35.0 30.0 39.0 17.0 40.0 50 31.43306869868082 35.0 29.0 39.0 12.0 40.0 51 31.81670420560218 35.0 30.0 39.0 12.0 40.0 52 31.525433910693497 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 7.0 16 18.0 17 48.0 18 142.0 19 272.0 20 712.0 21 1465.0 22 2739.0 23 4553.0 24 6811.0 25 8905.0 26 11185.0 27 14137.0 28 16835.0 29 17727.0 30 18976.0 31 19836.0 32 22268.0 33 26699.0 34 36195.0 35 43028.0 36 61140.0 37 94080.0 38 158605.0 39 51195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.22892705572225 0.497262707240022 0.22426208060157293 0.04954815643615979 8 98.68260195828563 0.9397957514884687 0.21875672988644407 0.15884556033945346 9 96.26154302026778 2.230638572106331 0.7730160092360354 0.7348023983898468 10 43.44417979180059 37.38456979732213 5.47442359787623 13.696826813001048 11 25.557943006666335 35.447495955996054 17.715408990885408 21.279152046452207 12 35.54335382727124 16.62097765313376 26.159159689174377 21.676508830420623 13 19.602448909535752 20.070565642401565 24.450557902526146 35.87642754553654 14 25.356188095164846 29.305467622870523 23.989079974934462 21.34926430703017 15 39.8339650993149 16.571429496697597 22.17458114805993 21.420024255927565 16 27.006336010984793 19.96612590089397 33.09104392784105 19.93649416028019 17 39.9035915936533 16.38214258534508 17.584575950361167 26.129689870640448 18 39.658117720590496 17.480136208853576 23.38543446122857 19.47631160932736 19 30.3417689339536 16.376961078789666 32.3431258409828 20.938144146273928 20 28.438212963157874 31.118671073106203 20.582887103068263 19.860228860667668 21 29.471437754723674 16.870337656113126 33.74407567590324 19.91414891325996 22 26.710504371086547 18.81113570527591 18.98682116192046 35.49153876171708 23 24.632882164444826 33.531471985051354 18.64953746957889 23.18610838092493 24 24.11246459978529 33.06092642098769 19.140323293624643 23.686285685602375 25 24.4181734865548 20.8099018590274 17.316271064038563 37.45565359037924 26 37.32757322521256 19.16072547568659 19.075716383761808 24.43598491533904 27 26.017963635539303 17.23369080331163 19.40037015387455 37.34797540727451 28 24.97113738926554 33.352710008889524 18.840605523809835 22.835547078035106 29 39.06661636287386 20.03818122643022 17.37035303871071 23.524849371985212 30 27.055236479101524 31.256790607223994 19.19731986573421 22.49065304794027 31 38.50863287568756 21.019267108282154 19.026977837724928 21.445122178305358 32 28.987452658031902 20.047248862902194 29.74557183592112 21.219726643144785 33 39.366981821008096 18.946502564036134 20.03510470691294 21.65141090804283 34 26.76215751456084 22.54764962004984 18.78862853617582 31.901564329213492 35 26.72766811155136 33.479656919497195 20.52993858295511 19.26273638599633 36 36.83759701156609 22.842509727468947 18.821012952147168 21.498880308817792 37 28.185290674421655 23.69033373759879 26.981238088607 21.143137499372553 38 37.99096798638559 21.089865135099686 19.05320921466172 21.865957663853 39 26.359943068196724 20.80585380703098 20.015350213170418 32.81885291160188 40 26.634239071474024 21.95906285977062 28.32065753318188 23.08604053557347 41 27.153685103654418 28.632843303145663 21.768318649699392 22.445152943500528 42 34.362618020955956 22.055406497285375 20.235240397615858 23.346735084142807 43 35.613142243689495 20.620291103515168 21.754231428751854 22.012335224043486 44 26.670023851122366 27.07725788196204 21.865795741773145 24.386922525142452 45 24.042514261287184 20.847143937394446 21.84021205315578 33.27012974816259 46 24.810834530207373 20.28818891772901 29.895511681868452 25.005464870195166 47 34.87785407906007 21.099742381970948 21.652868206761543 22.369535332207434 48 36.83014859589269 20.532691258312674 20.898635158788885 21.738524987005754 49 35.33722701961362 20.07024179824185 22.256027954227868 22.336503227916662 50 27.10494655761754 26.872102606783564 21.235756929050602 24.787193906548293 51 25.63145563092129 30.169159996826327 21.695291791684006 22.50409258056838 52 33.04975379747758 23.1300833412945 21.19333334412814 22.626829517099782 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 31.0 6 62.0 7 41.0 8 20.0 9 55.0 10 90.0 11 380.0 12 670.0 13 736.5 14 1042.0 15 1281.0 16 961.0 17 641.0 18 793.5 19 946.0 20 998.0 21 1050.0 22 1123.5 23 1197.0 24 1349.0 25 1501.0 26 1748.0 27 1995.0 28 2570.5 29 3146.0 30 3612.0 31 4078.0 32 4333.0 33 4588.0 34 4752.0 35 4916.0 36 6026.0 37 7136.0 38 7862.0 39 9494.5 40 10401.0 41 10755.5 42 11110.0 43 11305.0 44 11500.0 45 13131.0 46 14762.0 47 15716.0 48 16670.0 49 18330.0 50 19990.0 51 23736.5 52 27483.0 53 34310.0 54 41137.0 55 56165.5 56 71194.0 57 66722.0 58 62250.0 59 63461.0 60 64672.0 61 58433.5 62 52195.0 63 51083.5 64 43284.0 65 36596.0 66 33525.5 67 30455.0 68 24398.5 69 18342.0 70 15171.5 71 12001.0 72 11059.5 73 10118.0 74 8901.5 75 7685.0 76 5882.0 77 4079.0 78 2764.0 79 1449.0 80 981.5 81 514.0 82 343.5 83 173.0 84 123.0 85 73.0 86 49.0 87 25.0 88 25.0 89 13.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 617581.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.07185949393327 #Duplication Level Percentage of deduplicated Percentage of total 1 79.28540730634975 15.914055553723227 2 8.979951262966798 3.6048864002527643 3 3.299923384511451 1.9870679554397574 4 1.5425161692192733 1.2384467126275782 5 0.8343937840761854 0.8373917398294245 6 0.494864578297275 0.5959711370464467 7 0.35101245174747714 0.4931830828467476 8 0.25782828470688995 0.4140074483358816 9 0.199995914813473 0.361286091134701 >10 2.254566377312846 11.694126723601917 >50 1.5140211491347393 21.827843032407817 >100 0.9533915671209209 32.689127518070855 >500 0.025702215794329797 3.544979064512098 >1k 0.005622359705009642 2.0996774449136186 >5k 0.0 0.0 >10k+ 8.031942435728062E-4 2.697950095257172 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGGACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAGGACTGGGAAG 16735 2.709766006402399 No Hit AGGACTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3693 0.5979782409109089 No Hit AGGACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAGGACTGGGGAG 2209 0.35768587440351957 No Hit AGGACTGGGAAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTC 1470 0.23802545738939507 Illumina Single End Adapter 2 (100% over 25bp) AGGACTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1451 0.23494893787211718 No Hit AGGACTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1425 0.23073896379584216 No Hit AGGACTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1425 0.23073896379584216 No Hit AGGACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 1351 0.21875672988644407 No Hit AGGACTGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 970 0.1570644174610294 No Hit AGGACTGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 967 0.15657865122145923 No Hit AGGACTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 928 0.15026369010704668 No Hit AGGACTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 916 0.14832062514876593 No Hit AGGACTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 870 0.14087220947535628 No Hit AGGACTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 854 0.1382814561976486 No Hit AGGACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAGGACTGGGCAG 841 0.13617646915951104 No Hit AGGACTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 838 0.13569070291994087 No Hit AGGACTGGGAGCCTCGCTTGTCAAGGAAAGTATACCCCAAGTGGCCAGTCTG 815 0.13196649508323605 No Hit AGGACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTA 744 0.12047002741340812 No Hit AGGACTGGGGGTAATGCACTTTGGATGGGAAGAAAATGTACGTGCTTTTCAG 725 0.11739350789613022 No Hit AGGACTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 707 0.11447891045870905 No Hit AGGACTGGGGCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCATGA 677 0.10962124806300712 No Hit AGGACTGGGGCTAGGACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCT 647 0.10476358566730518 No Hit AGGACTGGGAAGCAGTGGTATCAACGCAGAGATCGGAAGAGCTCGTATGCCG 645 0.10443974150759171 Illumina Single End Adapter 2 (100% over 23bp) AGGACTGGGATCATATTCGTAGGAGTAAACATAACATTCTTCCCTCAACATT 634 0.10265859862916768 No Hit AGGACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 633 0.10249667654931094 No Hit AGGACTGGGAAGCAGTGGTATCAACGCAGGATCGGAAGAGCTCGTATGCCGT 632 0.1023347544694542 Illumina Single End Adapter 2 (95% over 24bp) AGGACTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAGGGCTGGGAAG 624 0.10103937783060037 No Hit AGGACTGGGAAGCAGTGGTATCAACAGATCGGAAGAGCTCGTATGCCGTCTT 619 0.1002297674313167 Illumina Single End Adapter 2 (100% over 27bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.025583688617363553 0.0 0.0 0.0 0.0 8 0.03967090956489918 0.0 0.0 0.0 0.0 9 0.05553927339085885 0.0 0.0 0.0 0.0 10 0.13423340420123028 0.0 0.0 0.0 0.0 11 0.23122473003541236 0.0 0.0 0.0 0.0 12 0.2759152240758702 0.0 0.0 0.0 0.0 13 0.3238441597134627 0.0 0.0 0.0 0.0 14 0.44512379752615444 0.0 0.0 0.0 0.0 15 0.5000153825975864 0.0 0.0 0.0 0.0 16 0.5712610977345481 0.0 0.0 0.0 0.0 17 0.6463929427880716 0.0 0.0 0.0 0.0 18 0.7119713851300478 0.0 0.0 0.0 0.0 19 0.7676725806007633 0.0 0.0 0.0 0.0 20 0.8283933605470376 0.0 0.0 0.0 0.0 21 0.8623969973169512 0.0 0.0 0.0 0.0 22 0.9132405303919647 0.0 0.0 0.0 0.0 23 0.9804381935325083 0.0 0.0 0.0 0.0 24 1.060751545141447 0.0 0.0 0.0 0.0 25 1.1217961692474347 0.0 0.0 0.0 0.0 26 1.289871288138722 0.0 0.0 0.0 0.0 27 1.381357263257775 0.0 0.0 0.0 0.0 28 1.699696072256109 0.0 0.0 0.0 0.0 29 1.7804951901046178 0.0 0.0 0.0 0.0 30 1.935292698447653 0.0 0.0 0.0 0.0 31 1.9850027769636696 0.0 0.0 0.0 0.0 32 2.0748695312841554 0.0 0.0 0.0 0.0 33 2.1381810645081374 0.0 0.0 0.0 0.0 34 2.2139605978810875 0.0 0.0 0.0 0.0 35 2.5063918741023445 0.0 0.0 0.0 0.0 36 2.5781233554788763 0.0 0.0 0.0 0.0 37 2.653902888851827 0.0 0.0 0.0 0.0 38 2.7089563960031153 0.0 0.0 0.0 0.0 39 2.7491130718075847 0.0 0.0 0.0 0.0 40 2.797203929525034 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATAG 35 1.0185431E-7 46.000004 45 CCTAGGT 35 1.0185431E-7 46.000004 12 CCCGTTA 35 1.0185431E-7 46.000004 26 AATTGCG 35 1.0185431E-7 46.000004 44 CCTCAAC 70 0.0 46.000004 43 TTGCGAC 35 1.0185431E-7 46.000004 46 ACATGTT 35 1.0185431E-7 46.000004 26 CATAAGA 35 1.0185431E-7 46.000004 23 GTCCCTA 35 1.0185431E-7 46.000004 19 GCAATTA 35 1.0185431E-7 46.000004 24 TAAGGCA 75 0.0 46.000004 21 CGCACTA 35 1.0185431E-7 46.000004 31 AACTATA 35 1.0185431E-7 46.000004 44 CGCAATT 35 1.0185431E-7 46.000004 23 ATTGCGA 35 1.0185431E-7 46.000004 45 CTGATAG 35 1.0185431E-7 46.000004 29 TAAGATA 35 1.0185431E-7 46.000004 27 GTTATGT 35 1.0185431E-7 46.000004 29 ATATTCG 70 0.0 46.000004 13 TTTAGTA 20 6.3091755E-4 46.0 40 >>END_MODULE