##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527872_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4227117 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.784643292343222 31.0 31.0 33.0 30.0 34.0 2 31.988502329128814 31.0 31.0 34.0 31.0 34.0 3 32.771065243758336 34.0 31.0 34.0 31.0 34.0 4 36.4171060323147 37.0 37.0 37.0 35.0 37.0 5 36.20838032162346 37.0 37.0 37.0 35.0 37.0 6 33.907453235857915 35.0 33.0 35.0 32.0 36.0 7 35.796840257792724 36.0 35.0 37.0 35.0 37.0 8 36.56707822376338 37.0 37.0 37.0 35.0 37.0 9 38.69078901766854 39.0 39.0 39.0 38.0 39.0 10 38.06391188131296 39.0 38.0 39.0 37.0 39.0 11 37.71860490258491 39.0 37.0 39.0 35.0 39.0 12 37.36276521326474 39.0 37.0 39.0 35.0 39.0 13 37.2766199752692 39.0 37.0 39.0 34.0 39.0 14 38.07974252900973 40.0 38.0 40.0 34.0 40.0 15 38.15419303511116 40.0 38.0 40.0 34.0 40.0 16 38.12115467823578 40.0 38.0 40.0 34.0 40.0 17 38.092662918958716 40.0 38.0 40.0 34.0 40.0 18 38.07063632258109 40.0 38.0 40.0 34.0 40.0 19 38.033480029059994 40.0 38.0 40.0 34.0 40.0 20 38.03587243977396 40.0 38.0 40.0 34.0 40.0 21 38.04515323327932 40.0 38.0 40.0 34.0 40.0 22 38.04974241309147 40.0 38.0 40.0 34.0 40.0 23 38.02956009970862 40.0 38.0 40.0 34.0 40.0 24 37.937220332439345 40.0 37.0 40.0 34.0 40.0 25 37.77968956146707 40.0 37.0 40.0 34.0 40.0 26 37.54209476577062 40.0 36.0 40.0 34.0 40.0 27 37.390471803832256 40.0 35.0 40.0 33.0 40.0 28 37.305173242188474 40.0 35.0 40.0 33.0 40.0 29 37.19394589740478 40.0 35.0 40.0 33.0 40.0 30 37.03775149824337 39.0 35.0 40.0 33.0 40.0 31 36.91937057810323 39.0 35.0 40.0 32.0 40.0 32 36.72893298198276 39.0 35.0 40.0 32.0 40.0 33 36.61144179354392 39.0 35.0 40.0 31.0 40.0 34 36.37906189963514 39.0 35.0 40.0 30.0 40.0 35 36.23829409027476 39.0 35.0 40.0 30.0 40.0 36 36.19103824190341 39.0 35.0 40.0 30.0 40.0 37 35.99681011904804 39.0 35.0 40.0 30.0 40.0 38 35.83338265773103 39.0 35.0 40.0 30.0 40.0 39 35.637635769248874 39.0 35.0 40.0 29.0 40.0 40 35.376784697466384 38.0 35.0 40.0 27.0 40.0 41 35.16714820053478 38.0 35.0 40.0 26.0 40.0 42 35.07455223027893 38.0 35.0 40.0 26.0 40.0 43 34.977454373749296 38.0 34.0 40.0 26.0 40.0 44 34.821123238367896 38.0 34.0 40.0 25.0 40.0 45 34.65996493591258 38.0 34.0 40.0 24.0 40.0 46 34.49234288996496 38.0 34.0 40.0 23.0 40.0 47 34.351961159343354 37.0 34.0 40.0 23.0 40.0 48 34.19658102673761 37.0 33.0 40.0 23.0 40.0 49 34.45963833033247 37.0 34.0 40.0 24.0 40.0 50 34.41885142994622 37.0 34.0 40.0 24.0 40.0 51 34.388228194298854 37.0 34.0 40.0 24.0 40.0 52 33.919916340143885 36.0 34.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 12.0 15 34.0 16 102.0 17 336.0 18 773.0 19 1656.0 20 3056.0 21 5653.0 22 9691.0 23 15377.0 24 23092.0 25 32492.0 26 44716.0 27 59299.0 28 72234.0 29 78027.0 30 80212.0 31 90448.0 32 115197.0 33 150096.0 34 280843.0 35 281416.0 36 393757.0 37 603980.0 38 1385206.0 39 499408.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.50299459418795 0.3478020598909375 0.09737132896960268 0.05183201695150619 8 98.82943859845848 0.8577477273517625 0.1764796195610389 0.1363340546287221 9 97.23165930822356 1.3057126168970483 0.7043098168326072 0.7583182580467964 10 51.701999258596345 26.299887133476552 13.04217508055727 8.955938527369836 11 31.173965612969784 30.369587593624686 23.77343707306895 14.683009720336578 12 29.239857803793935 25.439584473294687 23.42575329710533 21.894804425806054 13 23.78668487292876 25.12949132943327 25.744922603277836 25.338901194360126 14 22.376906056775812 27.92943748658956 26.090335327836918 23.603321128797713 15 25.453849514929445 25.94967208146829 24.876765890321938 23.719712513280328 16 27.95510509881794 26.929228597173914 24.060914330026826 21.05475197398132 17 29.27725918161243 27.25706433013328 22.311873553535424 21.15380293471886 18 27.49152673086645 27.99238819270912 22.64865155140016 21.867433525024264 19 27.130713438970343 28.62154040212277 22.65260223457264 21.595143924334245 20 26.08435016111454 29.79096627796202 21.991607991924518 22.13307556899892 21 26.025563049236634 28.04237498039444 25.339658211494974 20.592403758873957 22 24.410348708114775 26.514950970129288 25.050004530274418 24.024695791481523 23 25.228140124817934 28.8575404939111 24.10872469344946 21.80559468782151 24 26.155249547149985 28.584233651446127 23.5726855916219 21.687831209781987 25 25.99942230129897 27.868947086158247 22.0906352958766 24.04099531666618 26 25.080427156381052 27.29995408217941 23.38035592580002 24.239262835639515 27 23.192994184925563 26.67058896169659 23.542783414795473 26.59363343858237 28 25.834368909117018 29.15367613434878 21.462405701096042 23.549549255438162 29 27.42987714794741 27.872684858261554 22.477683962852225 22.21975403093882 30 27.33610165036832 27.25848373726112 22.73315358907738 22.67226102329318 31 28.975800764445363 26.656181979349046 22.71060867253024 21.65740858367535 32 29.356107247563767 26.604491903110322 22.645718110002633 21.39368273932328 33 29.39017301863185 26.691264992192075 23.233470944854375 20.685091044321695 34 25.752421804269908 27.827287486956244 25.099967661174272 21.320323047599583 35 24.147072342686513 31.086317222825866 24.22071591583578 20.54589451865184 36 24.982393437418455 31.044633966838393 22.44200953037259 21.53096306537056 37 26.345639356563822 30.188376616970857 21.74827429664237 21.71770972982295 38 27.328555135805328 29.84958779234168 22.071662553934512 20.750194517918477 39 26.796443060364783 27.354766854099378 21.785297165893443 24.063492919642396 40 25.927552987059503 26.70011262995559 23.05744080421715 24.31489357876775 41 23.999548628533347 27.979447931060342 22.20695571000282 25.814047730403487 42 23.14842480111149 28.24367056790716 23.121668976751767 25.48623565422958 43 23.63975257841219 27.06875631784027 23.861061806427404 25.430429297320135 44 24.6796812106218 26.207507386239843 23.691679222505552 25.421132180632807 45 25.862544140604577 26.84780194160701 22.804668051534886 24.484985866253524 46 24.326982196139827 27.803228536139407 23.552908518974043 24.316880748746723 47 24.312149391653932 27.750781442765838 23.71266279121207 24.224406374368158 48 25.74679148932949 26.886267874771384 24.85374783806552 22.513192797833607 49 26.58277497405442 26.026911486008075 24.037777993843086 23.35253554609442 50 23.67116878950831 26.88184405588963 24.809769873888044 24.63721728071402 51 22.949305637861457 27.907058167540665 24.858952330867588 24.28468386373029 52 23.724089018591158 26.595644265346806 25.67901479897528 24.00125191708675 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 102.5 4 205.0 5 252.0 6 299.0 7 1006.5 8 1714.0 9 16090.0 10 30466.0 11 25249.5 12 20033.0 13 19390.0 14 16931.0 15 15115.0 16 15853.0 17 16591.0 18 17811.0 19 19031.0 20 19259.5 21 19488.0 22 23933.5 23 28379.0 24 32717.0 25 37055.0 26 44300.5 27 51546.0 28 56117.0 29 60688.0 30 67217.5 31 73747.0 32 77683.0 33 81619.0 34 89893.5 35 98168.0 36 106475.5 37 114783.0 38 122411.0 39 136408.0 40 142777.0 41 149443.5 42 156110.0 43 161802.5 44 167495.0 45 176849.5 46 186204.0 47 192900.0 48 199596.0 49 218741.5 50 237887.0 51 251575.5 52 265264.0 53 267843.0 54 270422.0 55 293476.0 56 316530.0 57 316092.5 58 315655.0 59 304961.5 60 294268.0 61 284714.5 62 275161.0 63 231162.0 64 162530.5 65 137898.0 66 110746.5 67 83595.0 68 72690.5 69 61786.0 70 53091.5 71 44397.0 72 41310.0 73 38223.0 74 28331.5 75 18440.0 76 12191.0 77 5942.0 78 4515.5 79 3089.0 80 1996.0 81 903.0 82 684.5 83 466.0 84 289.0 85 112.0 86 64.0 87 16.0 88 8.5 89 2.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 4227117.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.410858684443612 #Duplication Level Percentage of deduplicated Percentage of total 1 75.52603312891569 9.373429241595792 2 9.005223031801474 2.2352510093916993 3 3.738218286337188 1.3918349665000143 4 1.8539633730382155 0.9203710971564684 5 1.0020530819227687 0.6218169597027339 6 0.6396098892836737 0.4762864769443379 7 0.4077027527892674 0.3541958875088372 8 0.29340463439937586 0.2913122763913198 9 0.2394613029702963 0.26747283524013765 >10 3.1537793812755046 10.576347585158677 >50 2.3937091364790346 21.426788249922556 >100 1.6650394775699393 37.27498296135452 >500 0.0562511523291292 4.595248746018537 >1k 0.02173773344244315 4.783079896449069 >5k 0.0019068187230213292 1.5993691116979396 >10k+ 0.0019068187230213292 3.812212698967335 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CAAAGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 28138 0.665654629384519 No Hit CAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 21626 0.5116016424433012 No Hit CAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 17737 0.4196004037740143 No Hit CAAAGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 16604 0.3927972658433632 No Hit CAAAGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 15568 0.3682888361027149 No Hit CAAAGTGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 14953 0.353739913042388 No Hit CAAAGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 12857 0.30415529070995667 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGAAG 11876 0.2809479841698254 No Hit CAAAGTGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 10949 0.25901814404474727 No Hit CAAAGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 10781 0.2550438040868043 No Hit CAAAGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8699 0.20579037675086828 No Hit CAAAGTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 8000 0.18925428371156985 No Hit CAAAGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 7391 0.1748473013640266 No Hit CAAAGTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 7075 0.1673717571574196 No Hit CAAAGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6955 0.16453294290174603 No Hit CAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 6672 0.15783807261544924 No Hit CAAAGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6169 0.1459387095270843 No Hit CAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 6130 0.1450160948939904 No Hit CAAAGTGGGAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAAC 5309 0.12559387402809055 No Hit CAAAGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5183 0.1226131190596333 No Hit CAAAGTGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 4375 0.10349843640476476 No Hit CAAAGTGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCT 4324 0.10229194034610349 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.039814369935821506 0.0 0.0 0.0 0.0 8 0.1772129799104212 0.0 0.0 0.0 0.0 9 0.19774706969312655 0.0 0.0 0.0 0.0 10 0.34096524889185703 0.0 0.0 0.0 0.0 11 0.48165215204594525 0.0 0.0 0.0 0.0 12 0.545549129584064 0.0 0.0 0.0 0.0 13 0.5911357551730885 0.0 0.0 0.0 0.0 14 0.6291995229845779 0.0 0.0 0.0 0.0 15 0.6676181425780265 0.0 0.0 0.0 0.0 16 0.7161618663500442 0.0 0.0 0.0 0.0 17 0.7592881862508182 0.0 0.0 0.0 0.0 18 0.7989133019029282 0.0 0.0 0.0 0.0 19 0.8554530191617596 0.0 0.0 0.0 0.0 20 0.9023880815222289 0.0 0.0 0.0 0.0 21 0.9479510503257894 0.0 0.0 0.0 0.0 22 0.9948387991153308 0.0 0.0 0.0 0.0 23 1.0499827660317895 0.0 0.0 0.0 0.0 24 1.1097161493282537 0.0 0.0 0.0 0.0 25 1.1634880226878035 0.0 0.0 0.0 0.0 26 1.2230558084860201 0.0 0.0 0.0 0.0 27 1.2729479690294827 0.0 0.0 0.0 0.0 28 1.3371997983495607 0.0 0.0 0.0 0.0 29 1.3712419126321793 0.0 0.0 0.0 0.0 30 1.4141316646783137 0.0 0.0 0.0 0.0 31 1.4443177229303092 0.0 0.0 0.0 0.0 32 1.4785490914966395 0.0 0.0 0.0 0.0 33 1.5057307379947136 0.0 0.0 0.0 0.0 34 1.5404115854848588 0.0 0.0 0.0 0.0 35 1.5912973310178071 0.0 0.0 0.0 0.0 36 1.620016668571038 0.0 0.0 0.0 0.0 37 1.6487596629097325 0.0 0.0 0.0 0.0 38 1.675349889771208 0.0 0.0 0.0 0.0 39 1.7005916798612388 0.0 0.0 0.0 0.0 40 1.7246742874635361 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTGGGG 226430 0.0 43.06342 4 AAGTGGG 434030 0.0 42.970463 3 CAAAGTG 450535 0.0 42.960968 1 GTGGGAT 30345 0.0 42.92272 5 AAAGTGG 446025 0.0 42.9158 2 GTGGGGT 53255 0.0 42.851562 5 GTGGGGG 79375 0.0 42.467777 5 TGGGTAC 3995 0.0 42.31539 6 TGGGGGG 37060 0.0 42.059093 6 GTGGGAC 15335 0.0 41.995438 5 AGTGGGA 115020 0.0 41.9687 4 AGTGGGC 39260 0.0 41.85227 4 GTGGGGA 61590 0.0 41.630783 5 GTGGGGC 36845 0.0 41.630344 5 TGGGATT 10090 0.0 41.190285 6 TGGGGTG 20360 0.0 40.961693 6 TGGGTAT 4290 0.0 40.960373 6 GTGGGTG 22285 0.0 40.953106 5 TGGGATA 5055 0.0 40.904057 6 TGGGGTC 11285 0.0 40.823215 6 >>END_MODULE