##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527871_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4246218 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.745146386737563 31.0 31.0 33.0 30.0 33.0 2 31.95887187139238 31.0 31.0 34.0 31.0 34.0 3 32.75688765861762 34.0 31.0 34.0 31.0 34.0 4 36.398557021801516 37.0 37.0 37.0 35.0 37.0 5 36.215334445852754 37.0 37.0 37.0 35.0 37.0 6 33.80345945497852 35.0 33.0 35.0 32.0 36.0 7 35.74114706310416 36.0 35.0 37.0 35.0 37.0 8 36.53984039444042 37.0 37.0 37.0 35.0 37.0 9 38.65312073002375 39.0 39.0 39.0 38.0 39.0 10 37.983647565904526 39.0 38.0 39.0 35.0 39.0 11 37.69849616764848 39.0 37.0 39.0 35.0 39.0 12 37.32019528907842 39.0 37.0 39.0 35.0 39.0 13 37.09407642283086 39.0 37.0 39.0 34.0 39.0 14 38.02511717486008 40.0 38.0 40.0 34.0 40.0 15 38.11838487802557 40.0 38.0 40.0 34.0 40.0 16 38.11181573814628 40.0 38.0 40.0 34.0 40.0 17 38.11498444027132 40.0 38.0 40.0 34.0 40.0 18 38.10241890548248 40.0 38.0 40.0 34.0 40.0 19 38.02245409915365 40.0 38.0 40.0 34.0 40.0 20 38.03731885645061 40.0 38.0 40.0 34.0 40.0 21 38.10042324722848 40.0 38.0 40.0 34.0 40.0 22 37.99780133756675 40.0 38.0 40.0 34.0 40.0 23 38.004785670448385 40.0 38.0 40.0 34.0 40.0 24 37.95962595420207 40.0 38.0 40.0 34.0 40.0 25 37.772176558057076 40.0 37.0 40.0 34.0 40.0 26 37.48985591413347 40.0 36.0 40.0 34.0 40.0 27 37.342209938349846 40.0 35.0 40.0 33.0 40.0 28 37.27558429642566 40.0 35.0 40.0 33.0 40.0 29 37.16116906856878 40.0 35.0 40.0 33.0 40.0 30 36.992332706422516 39.0 35.0 40.0 32.0 40.0 31 36.895577429138115 39.0 35.0 40.0 32.0 40.0 32 36.71101554371443 39.0 35.0 40.0 32.0 40.0 33 36.4181488091285 39.0 35.0 40.0 31.0 40.0 34 36.295295484122576 39.0 35.0 40.0 30.0 40.0 35 36.229637055845934 39.0 35.0 40.0 30.0 40.0 36 36.038459165308986 39.0 35.0 40.0 30.0 40.0 37 35.92266247281699 39.0 35.0 40.0 30.0 40.0 38 35.499878715600566 38.0 35.0 40.0 27.0 40.0 39 35.47604597785606 38.0 35.0 40.0 27.0 40.0 40 35.2905456102348 38.0 35.0 40.0 26.0 40.0 41 34.887916494160216 38.0 34.0 40.0 24.0 40.0 42 34.93276746507127 38.0 34.0 40.0 25.0 40.0 43 34.93871887877636 38.0 34.0 40.0 26.0 40.0 44 34.78451765783104 38.0 34.0 40.0 24.0 40.0 45 34.62239291529545 38.0 34.0 40.0 24.0 40.0 46 34.28432925488046 37.0 34.0 40.0 23.0 40.0 47 34.06491423662186 37.0 33.0 40.0 22.0 40.0 48 34.06914953495087 37.0 33.0 40.0 23.0 40.0 49 34.03275432396547 37.0 33.0 40.0 23.0 40.0 50 33.80345168335681 36.0 33.0 40.0 22.0 40.0 51 34.0441340976841 37.0 33.0 40.0 23.0 40.0 52 33.76405144530968 36.0 33.0 40.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 6.0 14 10.0 15 37.0 16 113.0 17 323.0 18 795.0 19 1667.0 20 3286.0 21 5697.0 22 9978.0 23 16088.0 24 23885.0 25 33318.0 26 46052.0 27 60664.0 28 73745.0 29 79819.0 30 82270.0 31 94317.0 32 118979.0 33 160046.0 34 287402.0 35 290896.0 36 416734.0 37 651315.0 38 1363760.0 39 425016.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.49152398675716 0.35537506552890125 0.0996887112249065 0.05341223648903566 8 98.83607012169418 0.8510161277635769 0.17691037059331388 0.13600337994893338 9 97.20652590140214 1.2983318331748392 0.7247154997694418 0.7704267656535769 10 51.67798732895956 26.334587625976813 13.072597779953831 8.9148272651098 11 31.22663509033215 30.334500018604793 23.806973641014192 14.631891250048866 12 29.267880264272815 25.401121656966268 23.42950832952995 21.90148974923096 13 24.039486432397016 25.05851089133907 25.721312471474615 25.180690204789297 14 22.39136097110417 27.879279867402 26.080102340482753 23.649256821011075 15 25.52115788685367 25.933642596776707 24.835088542321664 23.710110974047964 16 28.001812436384565 26.903752939674792 24.026321776225338 21.06811284771531 17 29.28964080506465 27.236920007404237 22.315811387922146 21.157627799608967 18 27.501791005548938 27.946421968914454 22.67728599897603 21.874501026560576 19 27.128470558977426 28.61042461785994 22.645752055122937 21.6153527680397 20 26.109045743765392 29.76076593335528 21.958481641780992 22.171706681098332 21 25.994661602395354 28.00831233817953 25.366973622173898 20.63005243725122 22 24.619767520179135 26.444355895057676 24.95199257315569 23.983884011607508 23 25.265400881443206 28.859516868893685 24.049071432507706 21.82601081715541 24 26.148516161911612 28.534733732464986 23.60578284016506 21.710967265458343 25 25.986748678471056 27.869883270241896 22.105035586962327 24.038332464324725 26 25.2145556351558 27.207128790843992 23.394724434779373 24.18359113922083 27 23.19678358482772 26.615590626764806 23.54718952253511 26.64043626587236 28 25.867418959648326 29.119489390323345 21.443458626005544 23.56963302402279 29 27.484787639259217 27.846144498468988 22.479981008982584 22.189086853289208 30 27.339128608093134 27.180799478500635 22.737056835047092 22.743015078359143 31 29.033247939695983 26.649691560819534 22.69087456178651 21.62618593769797 32 29.405626371514604 26.576096658249764 22.653994684210748 21.36428228602488 33 29.33059489644667 26.676562531645807 23.30174757866883 20.69109499323869 34 25.78958499069054 27.837360210898265 25.093341886827293 21.27971291158391 35 24.13780922223023 31.080316648839034 24.221365930811842 20.56050819811889 36 25.167101641978817 30.907927949059612 22.434976254163118 21.48999415479846 37 26.355900709761016 30.15436324748282 21.776884747792035 21.712851294964132 38 27.40554064817209 29.74293830415678 21.97861720712408 20.872903840547046 39 26.83849486766812 27.318357182791843 21.80314340902893 24.04000454051111 40 25.966000803538584 26.660053723101356 23.05696504512957 24.316980428230487 41 24.305417197138723 27.860204068655918 22.201804052453266 25.63257468175209 42 23.157148314099747 28.188613961883256 23.13371569712153 25.520522026895463 43 23.65806465895062 27.049788776742034 23.87611752387654 25.416029040430804 44 24.701911206631408 26.17357375433857 23.68952795169725 25.43498708733277 45 25.9064183704181 26.8534493518703 22.80090188492442 24.43923039278718 46 24.531430086726587 27.737341794509845 23.50870821987943 24.222519898884137 47 24.61578750784816 27.668268562753962 23.670664106270568 24.04527982312731 48 25.74980841774963 26.860844167680508 24.900935373548887 22.488412041020975 49 26.702161782555677 25.952388690359278 24.019327316685107 23.326122210399937 50 23.756740704316172 26.800625874601824 24.79590072860131 24.646732692480697 51 22.98296978628982 27.854057422393293 24.85543606098415 24.307536730332735 52 23.7956930143483 26.515454458532272 25.681371045951952 24.007481481167474 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 91.5 4 183.0 5 247.0 6 311.0 7 973.0 8 1635.0 9 15147.0 10 28659.0 11 24618.5 12 20578.0 13 19549.5 14 17033.0 15 15545.0 16 15952.5 17 16360.0 18 17574.0 19 18788.0 20 18988.0 21 19188.0 22 23593.5 23 27999.0 24 32580.5 25 37162.0 26 44217.0 27 51272.0 28 55912.5 29 60553.0 30 66914.0 31 73275.0 32 77829.5 33 82384.0 34 90343.5 35 98303.0 36 106550.5 37 114798.0 38 122616.5 39 137428.5 40 144422.0 41 150996.5 42 157571.0 43 162651.0 44 167731.0 45 177218.0 46 186705.0 47 194146.5 48 201588.0 49 220875.5 50 240163.0 51 253478.5 52 266794.0 53 269798.0 54 272802.0 55 294966.0 56 317130.0 57 317350.5 58 317571.0 59 306573.0 60 295575.0 61 286183.5 62 276792.0 63 232558.0 64 163211.5 65 138099.0 66 111193.5 67 84288.0 68 73303.0 69 62318.0 70 53620.0 71 44922.0 72 41626.5 73 38331.0 74 28426.0 75 18521.0 76 12256.0 77 5991.0 78 4516.0 79 3041.0 80 2001.0 81 961.0 82 730.5 83 500.0 84 296.0 85 92.0 86 56.0 87 20.0 88 13.5 89 6.0 90 5.0 91 5.0 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 4246218.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.168425166593797 #Duplication Level Percentage of deduplicated Percentage of total 1 75.9866980228246 10.006251465701265 2 8.962638010870002 2.3604765588282146 3 3.651597971118594 1.4425738386348284 4 1.7774937544030964 0.9362717395578013 5 0.9585321239298943 0.6311179271873513 6 0.595695099178795 0.470661980138558 7 0.41924349887618834 0.3864543649072426 8 0.2963576396955719 0.3122050720703605 9 0.2476644096106248 0.2935215219947532 >10 3.2040514037826395 11.471245245006294 >50 2.3081106325413443 21.76427109970559 >100 1.5184388683176941 35.7530669948975 >500 0.050353331243099125 4.366686595870093 >1k 0.01958185103898299 4.611139904618755 >5k 0.0016784443747699708 1.4648288634650857 >10k+ 0.0018649381941888564 3.7292268274163023 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CAAAGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 26477 0.6235431153087289 No Hit CAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 19959 0.4700418113248072 No Hit CAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 16950 0.39917875153842786 No Hit CAAAGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 15754 0.3710125104269258 No Hit CAAAGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 14683 0.3457900654182145 No Hit CAAAGTGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 14111 0.33231925445184396 No Hit CAAAGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 12082 0.28453555611134423 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGAAG 11021 0.2595486147908562 No Hit CAAAGTGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 10578 0.24911580140256576 No Hit CAAAGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 10237 0.24108512563415255 No Hit CAAAGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8266 0.19466734868534777 No Hit CAAAGTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 7445 0.17533249588221803 No Hit CAAAGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 7030 0.16555909282095269 No Hit CAAAGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6861 0.16157908048997954 No Hit CAAAGTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 6747 0.1588943384442344 No Hit CAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 6394 0.15058105824995324 No Hit CAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 5925 0.1395359352722823 No Hit CAAAGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5768 0.13583852736717708 No Hit CAAAGTGGGAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAAC 5211 0.12272097193314145 No Hit CAAAGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4978 0.11723373599753946 No Hit CAAAGTGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 4286 0.10093688077248977 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0412837965455377 0.0 0.0 0.0 0.0 8 0.17808788903443018 0.0 0.0 0.0 0.0 9 0.19681043224817943 0.0 0.0 0.0 0.0 10 0.3362757164139948 0.0 0.0 0.0 0.0 11 0.47545839615394214 0.0 0.0 0.0 0.0 12 0.5387146868107101 0.0 0.0 0.0 0.0 13 0.5825654735578814 0.0 0.0 0.0 0.0 14 0.6199399088789129 0.0 0.0 0.0 0.0 15 0.6607762484168265 0.0 0.0 0.0 0.0 16 0.7097139148296201 0.0 0.0 0.0 0.0 17 0.7552132273943543 0.0 0.0 0.0 0.0 18 0.7937416307876798 0.0 0.0 0.0 0.0 19 0.8515106855088458 0.0 0.0 0.0 0.0 20 0.8961386344271538 0.0 0.0 0.0 0.0 21 0.9413788929348422 0.0 0.0 0.0 0.0 22 0.9861716944349066 0.0 0.0 0.0 0.0 23 1.0400078375627442 0.0 0.0 0.0 0.0 24 1.0985540544550467 0.0 0.0 0.0 0.0 25 1.151071376928834 0.0 0.0 0.0 0.0 26 1.2105360582052076 0.0 0.0 0.0 0.0 27 1.2583197565457072 0.0 0.0 0.0 0.0 28 1.3211050398260287 0.0 0.0 0.0 0.0 29 1.356642546378919 0.0 0.0 0.0 0.0 30 1.3970549792780305 0.0 0.0 0.0 0.0 31 1.4252212203895325 0.0 0.0 0.0 0.0 32 1.4579091323149211 0.0 0.0 0.0 0.0 33 1.4857456682629107 0.0 0.0 0.0 0.0 34 1.5181509757624314 0.0 0.0 0.0 0.0 35 1.5681013080345851 0.0 0.0 0.0 0.0 36 1.5946896744349914 0.0 0.0 2.3550368822326128E-5 0.0 37 1.6220787533753567 0.0 0.0 2.3550368822326128E-5 0.0 38 1.647748655391692 0.0 0.0 2.3550368822326128E-5 0.0 39 1.6707338153622824 0.0 0.0 2.3550368822326128E-5 0.0 40 1.6939073782834513 0.0 0.0 2.3550368822326128E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGAT 20 6.313387E-4 46.0 13 AGTGGGG 227600 0.0 43.106808 4 AAGTGGG 435260 0.0 43.065155 3 CAAAGTG 451640 0.0 43.035114 1 AAAGTGG 447230 0.0 43.006397 2 GTGGGAT 30940 0.0 42.989334 5 GTGGGGT 53665 0.0 42.601326 5 GTGGGGG 78870 0.0 42.576393 5 AGTGGGC 38585 0.0 42.345985 4 TGGGGGG 36645 0.0 42.146267 6 AGTGGGA 115790 0.0 42.03524 4 GTGGGAC 15195 0.0 41.98881 5 GTGGGGC 37110 0.0 41.779305 5 GTGGGGA 62795 0.0 41.667007 5 GTGGGTG 22640 0.0 41.17447 5 TGGGATG 9150 0.0 40.997814 6 TGGGATT 9970 0.0 40.99398 6 TGGGTAT 4290 0.0 40.853146 6 TGGGTAC 4145 0.0 40.839565 6 GTGGGAG 30810 0.0 40.78189 5 >>END_MODULE