##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527863_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 441647 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22340013630796 33.0 31.0 34.0 31.0 34.0 2 32.701084803021416 34.0 31.0 34.0 31.0 34.0 3 32.61658066283706 34.0 31.0 34.0 31.0 34.0 4 36.24370141764803 37.0 37.0 37.0 35.0 37.0 5 35.968409159351246 37.0 35.0 37.0 35.0 37.0 6 35.983738143811685 37.0 35.0 37.0 35.0 37.0 7 36.40459688393672 37.0 37.0 37.0 35.0 37.0 8 36.531906703770204 37.0 37.0 37.0 35.0 37.0 9 38.574891259308906 39.0 39.0 39.0 37.0 39.0 10 37.69219308633365 39.0 37.0 39.0 35.0 39.0 11 37.492703448681866 39.0 37.0 39.0 35.0 39.0 12 36.92994631459061 39.0 37.0 39.0 33.0 39.0 13 36.635516600361825 39.0 35.0 39.0 32.0 39.0 14 37.53764205349521 40.0 37.0 40.0 33.0 40.0 15 37.54136448339964 40.0 36.0 40.0 33.0 40.0 16 37.10047390789477 39.0 35.0 40.0 32.0 40.0 17 37.291590342513366 39.0 36.0 40.0 33.0 40.0 18 37.23999710175774 39.0 35.0 40.0 33.0 40.0 19 36.3778356923063 39.0 35.0 40.0 30.0 40.0 20 36.722081209653865 39.0 35.0 40.0 31.0 40.0 21 36.77672213328744 39.0 35.0 40.0 31.0 40.0 22 36.767166990832045 38.0 35.0 40.0 32.0 40.0 23 36.682637943878255 38.0 35.0 40.0 32.0 40.0 24 36.59860476806137 38.0 35.0 40.0 32.0 40.0 25 36.4503211841131 38.0 35.0 40.0 31.0 40.0 26 36.004843234528934 38.0 35.0 40.0 31.0 40.0 27 35.840913670872894 37.0 35.0 40.0 30.0 40.0 28 35.57670492497402 37.0 34.0 40.0 30.0 40.0 29 35.41268026274378 37.0 34.0 40.0 30.0 40.0 30 34.99165849649154 36.0 34.0 40.0 28.0 40.0 31 34.94328275749637 36.0 34.0 40.0 28.0 40.0 32 33.9086283842073 35.0 33.0 39.0 24.0 40.0 33 34.15176373891366 35.0 33.0 39.0 26.0 40.0 34 33.87188637078934 35.0 33.0 39.0 24.0 40.0 35 33.768969335238324 35.0 33.0 39.0 25.0 40.0 36 33.58559664166178 35.0 33.0 38.0 24.0 40.0 37 33.100374280817036 35.0 33.0 38.0 23.0 40.0 38 33.07163866164606 35.0 32.0 38.0 23.0 40.0 39 32.86194177703007 35.0 32.0 37.0 22.0 40.0 40 32.55402391502716 35.0 32.0 37.0 21.0 40.0 41 32.621247285728195 35.0 32.0 37.0 22.0 40.0 42 32.572312276546654 35.0 32.0 37.0 22.0 40.0 43 32.02874920468157 35.0 31.0 36.0 20.0 39.0 44 31.95044911433792 35.0 31.0 36.0 21.0 39.0 45 31.654411781354792 35.0 31.0 36.0 20.0 39.0 46 31.442095157444747 35.0 31.0 35.0 19.0 39.0 47 31.178995894911548 34.0 30.0 35.0 19.0 38.0 48 31.026570994482018 34.0 30.0 35.0 18.0 38.0 49 31.289178914381846 35.0 30.0 35.0 18.0 38.0 50 31.03569592910175 35.0 30.0 35.0 18.0 37.0 51 31.148489630859036 35.0 31.0 35.0 18.0 37.0 52 30.57933145702337 34.0 30.0 35.0 15.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 3.0 16 21.0 17 54.0 18 131.0 19 290.0 20 584.0 21 1138.0 22 1841.0 23 2736.0 24 4034.0 25 5784.0 26 7567.0 27 9529.0 28 11078.0 29 12804.0 30 14287.0 31 16147.0 32 19578.0 33 26332.0 34 46346.0 35 62913.0 36 66191.0 37 64674.0 38 56623.0 39 10959.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 98.53774620907649 1.34496554940937 0.05207779063369615 0.0652104508804543 8 98.69601740756758 1.114011869207761 0.1190996429274964 0.0708710802971604 9 97.01775399810255 2.1924749856786074 0.27601229035858954 0.5137587258602458 10 50.73327793464011 40.85027182342459 2.431127121886937 5.985323120048364 11 31.784434174804765 37.882064182480576 15.352079828460285 14.98142181425437 12 42.71624170434759 13.712761549382199 21.381555857958958 22.189440888311253 13 20.92961120532914 16.195287186372827 24.886844017960044 37.98825759033799 14 22.666065885197906 31.044476697452943 24.077374011371074 22.212083405978078 15 32.53888286346335 17.522591572002074 24.296327157209262 25.642198407325306 16 26.679678566819202 18.840386100211255 34.128614028851096 20.351321304118446 17 41.40388138037845 17.005210043315135 19.35663550301485 22.234273073291565 18 34.79588902449241 19.49452843560581 20.18852160209398 25.5210609378078 19 27.442052136661175 20.88228834340548 29.11556061741617 22.56009890251717 20 25.79594110228304 29.14024096167301 20.333433715161657 24.730384220882286 21 27.36755825353733 18.798950292880967 33.99253249767348 19.840958955908224 22 27.174417577839314 18.044048753869042 21.568809479063596 33.21272418922805 23 24.30696914051267 31.284260959544614 22.011244274273345 22.39752562566937 24 26.30969982814329 29.940427536018582 20.474723025402643 23.275149610435484 25 24.907675134213523 22.22725389281485 18.61667802566303 34.248392947308595 26 34.459647637140066 21.669342257504294 18.25802054582053 25.612989559535105 27 24.931676202940356 19.192477249930374 20.642956931667143 35.23288961546212 28 25.95353302524414 30.801069632534585 19.511057473502593 23.73433986871868 29 34.68335571168829 22.039320996180205 19.559965311662936 23.717357980468563 30 26.027800483191328 29.325230331010964 21.015426347286407 23.6315428385113 31 35.39184008948323 21.57718721060032 20.35358555588513 22.677387144031318 32 29.021141318745514 22.495341301990052 26.484726489707842 21.99879088955659 33 37.8512703584537 19.98768247038925 20.43328721807235 21.727759953084703 34 25.774430710499562 22.525229425310258 22.486057869746652 29.214281994443525 35 25.809979463236477 31.815680849184986 23.439081438343294 18.935258249235247 36 34.75558534304547 23.190013744008223 20.283393751117973 21.771007161828337 37 27.316159738433637 25.71420161350581 25.452001258923985 21.517637389136574 38 35.976696320817304 23.897592421096487 19.296632831197766 20.829078426888444 39 27.21494768446293 23.452893374120055 20.07236548646317 29.259793454953844 40 24.876654885009973 23.962576446800274 27.335632303627104 23.82513636456265 41 24.86057869746653 22.211856980801407 28.790187638543905 24.137376683188158 42 22.986457510183474 22.854678057362555 28.148045837512765 26.01081859494121 43 24.316931848286075 20.810737987578314 22.465000328316506 32.407329835819105 44 23.884912611203067 21.242983649837992 22.497152703403398 32.37495103555554 45 31.514308939039548 21.6650401791476 22.505983285293457 24.314667596519392 46 26.759833079359762 22.33820222938229 21.24705930301802 29.65490538823993 47 30.064961383186116 23.137935953374527 22.221140413044807 24.575962250394547 48 32.762590938011584 21.95758150740297 23.301414930929 21.97841262365645 49 33.16970340566108 21.305476998598426 22.548777643683756 22.976041952056732 50 25.401508444526964 27.139774525809074 23.098085122280917 24.360631907383045 51 23.327453826245847 28.393943579374476 23.620900855207893 24.65770173917178 52 29.933181930365198 23.13612455196118 23.63425994063132 23.2964335770423 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 59.0 8 118.0 9 76.5 10 35.0 11 52.5 12 70.0 13 185.5 14 583.0 15 865.0 16 999.5 17 1134.0 18 1052.0 19 970.0 20 880.0 21 790.0 22 867.0 23 944.0 24 979.0 25 1014.0 26 1208.5 27 1403.0 28 1720.5 29 2038.0 30 2925.0 31 3812.0 32 4236.5 33 4661.0 34 4425.5 35 4190.0 36 4445.5 37 4701.0 38 5362.5 39 6472.0 40 6920.0 41 7400.0 42 7880.0 43 8202.0 44 8524.0 45 9409.0 46 10294.0 47 11764.5 48 13235.0 49 12720.5 50 12206.0 51 14126.0 52 16046.0 53 18831.0 54 21616.0 55 24642.0 56 27668.0 57 30900.5 58 34133.0 59 41690.5 60 49248.0 61 46401.5 62 43555.0 63 38924.0 64 34910.5 65 35528.0 66 30958.0 67 26388.0 68 21802.5 69 17217.0 70 15476.5 71 13736.0 72 11609.5 73 9483.0 74 8857.0 75 8231.0 76 8300.0 77 8369.0 78 5487.0 79 2605.0 80 1700.0 81 795.0 82 612.0 83 429.0 84 294.5 85 160.0 86 83.0 87 6.0 88 6.0 89 3.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 441647.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.913147830733594 #Duplication Level Percentage of deduplicated Percentage of total 1 74.27539180106433 10.33404506313866 2 9.578986769085555 2.6654771797385695 3 4.037625921525867 1.6852825899417407 4 1.933373476329194 1.0759724395274959 5 1.043175419467183 0.7256926912217223 6 0.6770062004654418 0.5651572409639373 7 0.42150145653978227 0.4105088452995265 8 0.3319934252282455 0.3695258883225744 9 0.21807411264992593 0.27306876306190236 >10 3.4566374273764384 12.820872778485986 >50 2.446010382931632 24.557621811084417 >100 1.5281462073006005 35.6986462038687 >500 0.04068546877797126 3.5152508677744896 >1k 0.009764512506713103 2.6663828804452425 >5k 0.0 0.0 >10k+ 0.0016274187511188505 2.636494757125034 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGAAG 11644 2.636494757125034 No Hit TTCCGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3211 0.7270512422817318 No Hit TTCCGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2798 0.633537644317747 No Hit TTCCGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1971 0.4462840232131091 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGGAG 1512 0.34235486712238505 No Hit TTCCGCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1257 0.2846164470719828 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTC 1027 0.2325386564382867 Illumina Single End Adapter 2 (100% over 25bp) TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 916 0.2074054618281116 No Hit TTCCGCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 809 0.18317796792460947 No Hit TTCCGCGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 763 0.17276240979787025 No Hit TTCCGCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 752 0.17027173285451958 No Hit TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 745 0.16868675661784185 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTA 706 0.15985617472778033 No Hit TTCCGCGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTCT 682 0.15442197048774248 No Hit TTCCGCGGGAAGCAGTGGTATCAACAGATCGGAAGAGCTCGTATGCCGTCTT 672 0.15215771872106004 Illumina Single End Adapter 2 (100% over 27bp) TTCCGCGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 642 0.1453649634210127 No Hit TTCCGCGGGAAGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAA 630 0.14264786130099377 Illumina Single End Adapter 2 (100% over 34bp) TTCCGCGGGGGGGCGGACCGCGCTGCTGGAGGTGTGAGGAGCTTAGACTCGG 630 0.14264786130099377 No Hit TTCCGCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 613 0.13879863329763362 No Hit TTCCGCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 594 0.13449655494093699 No Hit TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 567 0.1283830751708944 No Hit TTCCGCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 564 0.12770379964088968 No Hit TTCCGCGGGCTCCTGGCCACTCAGGGAGCTTGGCTTCTTAAGTCTGACTCTT 552 0.12498669752087074 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGCAG 550 0.12453384716753425 No Hit TTCCGCGGGGCTCTCGAACCAGGCTGCTTCAGCCGTGAACAACGCCGAAATG 537 0.12159031987084709 No Hit TTCCGCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 525 0.11887321775082815 No Hit TTCCGCGGGGGACGCTGTTGAGCTGGGAGGCGCGGTTGGAAGTCGTTACTTT 523 0.11842036739749166 No Hit TTCCGCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 521 0.11796751704415517 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGTAG 518 0.11728824151415043 No Hit TTCCGCGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTCGG 511 0.11570326527747274 No Hit TTCCGCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 502 0.11366543868745853 No Hit TTCCGCGGGATGATATCTGTCGTAGAAACCTCGACATTGAGCGCCCAACCTA 501 0.11343901351079028 No Hit TTCCGCGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 500 0.11321258833412205 Illumina Single End Adapter 2 (97% over 34bp) TTCCGCGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGAGA 496 0.11230688762744907 No Hit TTCCGCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 480 0.10868408480075717 No Hit TTCCGCGGGGAGTCCATAGCTTGCAGCAGCCAGGTTCCATCCTTGCAAACAC 479 0.10845765962408892 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGATCGGAAGAGCTCGTATGCCG 477 0.10800480927075243 Illumina Single End Adapter 2 (100% over 23bp) TTCCGCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 475 0.10755195891741594 No Hit TTCCGCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 466 0.10551413232740174 No Hit TTCCGCGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 466 0.10551413232740174 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGAAA 462 0.10460843162072876 No Hit TTCCGCGGGGGAGTCAAGATGGAGGGTGTGGACTGCTCCATGGCTCTGGCCG 458 0.1037027309140558 No Hit TTCCGCGGGAAGCACAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAA 455 0.10302345538405107 Illumina Single End Adapter 2 (100% over 34bp) TTCCGCGGGCTCTTCAGATACTCTTGTGCTGTGCAGCAGTGGCTCTGTGTGT 452 0.10234417985404633 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGCGG 448 0.10143847914737335 No Hit TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTGCT 447 0.1012120539707051 No Hit TTCCGCGGGGGGTGGTGCTTTTGTATTGGTATTGTATGATGAGATCAAAAAA 444 0.10053277844070038 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.007698456006720299 0.0 0.0 0.0 0.0 8 0.018566864486796016 0.0 0.0 0.0 0.0 9 0.02762387155352578 0.0 0.0 0.0 0.0 10 0.07811668595054422 0.0 0.0 0.0 0.0 11 0.21148111500813999 0.0 0.0 0.0 0.0 12 0.2264251766682441 0.0 0.0 0.0 0.0 13 0.2868806988386653 0.0 0.0 0.0 0.0 14 0.4970032627867958 0.0 0.0 0.0 0.0 15 0.5615344381372454 0.0 0.0 0.0 0.0 16 0.8212441157757213 0.0 0.0 0.0 0.0 17 0.9269846732797913 0.0 0.0 0.0 0.0 18 0.9770246373234732 0.0 0.0 0.0 0.0 19 1.042461513380596 0.0 0.0 0.0 0.0 20 1.1031434607276853 0.0 0.0 0.0 0.0 21 1.140050764524609 0.0 0.0 0.0 0.0 22 1.1692596123148125 0.0 0.0 0.0 0.0 23 1.212280395881779 0.0 0.0 0.0 0.0 24 1.2799815237055838 0.0 0.0 0.0 0.0 25 1.3121338987924744 0.0 0.0 0.0 0.0 26 1.5079916766105057 0.0 0.0 0.0 0.0 27 1.5727492771376235 0.0 0.0 0.0 0.0 28 1.8951787287132031 0.0 0.0 0.0 0.0 29 1.9289160800367715 0.0 0.0 0.0 0.0 30 2.070431815454424 0.0 0.0 0.0 0.0 31 2.0926214827679117 0.0 0.0 0.0 0.0 32 2.1831915534352095 0.0 0.0 0.0 0.0 33 2.2264387621788444 0.0 0.0 0.0 0.0 34 2.2683274198624694 0.0 0.0 0.0 0.0 35 2.5178479645508745 0.0 0.0 0.0 0.0 36 2.551132465521106 0.0 0.0 0.0 0.0 37 2.621324270288262 0.0 0.0 0.0 0.0 38 2.6767984385719816 0.0 0.0 0.0 0.0 39 2.7227627494356352 0.0 0.0 0.0 0.0 40 2.748575219575815 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGTT 20 6.307211E-4 46.000004 34 ATTTAGG 20 6.307211E-4 46.000004 43 AGCGTAA 20 6.307211E-4 46.000004 21 TACCCGT 20 6.307211E-4 46.000004 36 CGAACGT 20 6.307211E-4 46.000004 38 AATCATA 20 6.307211E-4 46.000004 44 AATTTAC 20 6.307211E-4 46.000004 44 GATGTAC 40 5.5970304E-9 46.000004 42 CATATAG 20 6.307211E-4 46.000004 29 CTGTAAT 20 6.307211E-4 46.000004 15 CGAGTAT 20 6.307211E-4 46.000004 20 ACGTTCG 20 6.307211E-4 46.000004 41 TTAGCGA 20 6.307211E-4 46.000004 27 CGTGCAA 20 6.307211E-4 46.000004 34 TTTAACG 20 6.307211E-4 46.000004 11 GGGTACG 20 6.307211E-4 46.000004 19 ATTACAT 20 6.307211E-4 46.000004 27 GTCTCGA 20 6.307211E-4 46.000004 37 CCAATCA 20 6.307211E-4 46.000004 15 GCACGCA 20 6.307211E-4 46.000004 23 >>END_MODULE