##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527862_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 442884 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.193109256599925 33.0 31.0 34.0 31.0 34.0 2 32.685037165488026 34.0 31.0 34.0 31.0 34.0 3 32.59757408260402 34.0 31.0 34.0 31.0 34.0 4 36.2212294867279 37.0 35.0 37.0 35.0 37.0 5 35.9748421708619 37.0 35.0 37.0 35.0 37.0 6 35.92565999223273 37.0 35.0 37.0 35.0 37.0 7 36.36583845882895 37.0 35.0 37.0 35.0 37.0 8 36.50321303095167 37.0 37.0 37.0 35.0 37.0 9 38.529192745730256 39.0 39.0 39.0 37.0 39.0 10 37.602914081339584 39.0 37.0 39.0 35.0 39.0 11 37.4496978892893 39.0 37.0 39.0 35.0 39.0 12 36.86882343909466 39.0 35.0 39.0 33.0 39.0 13 36.427940499092315 39.0 35.0 39.0 32.0 39.0 14 37.4569345471952 40.0 36.0 40.0 33.0 40.0 15 37.4762443438914 40.0 36.0 40.0 33.0 40.0 16 37.07636085295472 39.0 35.0 40.0 32.0 40.0 17 37.29656298263202 39.0 36.0 40.0 33.0 40.0 18 37.267223471608816 39.0 35.0 40.0 33.0 40.0 19 36.337596300611445 39.0 35.0 40.0 30.0 40.0 20 36.71452569973176 39.0 35.0 40.0 31.0 40.0 21 36.81856422900805 39.0 35.0 40.0 31.0 40.0 22 36.69212931602858 38.0 35.0 40.0 31.0 40.0 23 36.64383901879499 38.0 35.0 40.0 31.0 40.0 24 36.60082098246945 38.0 35.0 40.0 32.0 40.0 25 36.43656352453464 38.0 35.0 40.0 31.0 40.0 26 35.9581854390766 38.0 35.0 40.0 31.0 40.0 27 35.76741539545344 37.0 35.0 40.0 30.0 40.0 28 35.525991004416504 37.0 34.0 40.0 30.0 40.0 29 35.34960170157423 37.0 34.0 40.0 29.0 40.0 30 34.92122542245825 36.0 34.0 40.0 27.0 40.0 31 34.903157485933114 36.0 34.0 40.0 28.0 40.0 32 33.88188329223905 35.0 33.0 39.0 24.0 40.0 33 33.953567977167836 35.0 33.0 39.0 25.0 40.0 34 33.76550970457276 35.0 33.0 39.0 24.0 40.0 35 33.748338165298364 35.0 33.0 39.0 25.0 40.0 36 33.42820016076445 35.0 33.0 38.0 23.0 40.0 37 33.023721787194845 35.0 32.0 38.0 22.0 40.0 38 32.74620442373172 35.0 32.0 37.0 22.0 40.0 39 32.66129731487252 35.0 32.0 37.0 22.0 40.0 40 32.42392364592083 35.0 31.0 37.0 21.0 40.0 41 32.319015814524796 35.0 31.0 37.0 21.0 40.0 42 32.386428500465136 35.0 31.0 36.0 22.0 40.0 43 31.985526684188184 35.0 31.0 36.0 20.0 39.0 44 31.896632075216083 35.0 31.0 36.0 20.0 39.0 45 31.602342825660894 35.0 31.0 36.0 20.0 39.0 46 31.24218982848782 34.0 30.0 35.0 18.0 39.0 47 30.893816439519153 34.0 30.0 35.0 18.0 38.0 48 30.887320381860714 34.0 30.0 35.0 18.0 38.0 49 30.86267058642895 34.0 29.0 35.0 18.0 37.0 50 30.257783076381173 34.0 29.0 35.0 15.0 37.0 51 30.68359886561718 34.0 30.0 35.0 17.0 37.0 52 30.346476729798322 34.0 29.0 35.0 14.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 1.0 14 2.0 15 10.0 16 16.0 17 50.0 18 139.0 19 305.0 20 588.0 21 1147.0 22 1923.0 23 2882.0 24 4368.0 25 6052.0 26 7746.0 27 9799.0 28 11506.0 29 13035.0 30 14483.0 31 17022.0 32 20468.0 33 28115.0 34 48045.0 35 63254.0 36 66071.0 37 63510.0 38 52989.0 39 9356.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 98.57005446121332 1.31592019580748 0.04764227201705187 0.0663830709621481 8 98.72968994138421 1.07816042123897 0.12260546779743679 0.06954416957939326 9 97.07891908490711 2.1339673593988495 0.29691747726266926 0.49019607843137253 10 50.671959248922974 40.89964866646797 2.450980392156863 5.9774116924522 11 31.73584956783266 37.86296185908726 15.450321077302409 14.950867495777675 12 42.60483557771335 13.693427624389232 21.385961109455298 22.315775688442123 13 21.145717614544665 16.203114133723503 24.88981313391317 37.76135511781866 14 22.56663144299636 31.07247044372793 24.097054759259763 22.26384335401595 15 32.626827792379046 17.574353555332774 24.32849233659378 25.470326315694404 16 26.646029208551226 18.81576214087662 34.148219398307454 20.3899892522647 17 41.471355930672594 16.908264918127546 19.445723936741903 22.17465521445796 18 34.82333974584767 19.382276171638622 20.125811724966358 25.668572357547347 19 27.440819718030003 20.912247902385275 29.283740211883924 22.3631921677008 20 25.830691558060348 28.99766078702324 20.39202138709007 24.779626267826337 21 27.185673901066643 18.799053476756892 34.15905745070944 19.85621517146702 22 27.3785009167186 18.08261305443412 21.525501034130833 33.013384994716446 23 24.362135457591606 31.26755538696363 21.977763929155262 22.392545226289503 24 26.161477949079213 30.00447069661582 20.502434045935278 23.331617308369687 25 24.801753958147053 22.318936787059364 18.586130905609597 34.29317834918398 26 34.57812881025279 21.61062490403808 18.204315351198055 25.60693093451107 27 24.792948040570444 19.425176795729808 20.596363833419133 35.18551133028062 28 25.97587630169525 30.824775787790937 19.519106583213663 23.68024132730015 29 34.60341759919076 22.115723304522177 19.49426937979245 23.786589716494614 30 26.05625852367663 29.372476765925164 20.8639282520931 23.707336458305107 31 35.28215063086497 21.533855366190696 20.333766855429413 22.850227147514925 32 29.057270075234147 22.580179008498842 26.462911281509378 21.899639634757634 33 37.72455089820359 20.125134346691233 20.383892847788584 21.766421907316587 34 25.598576602451207 22.630982379133137 22.422801455911706 29.347639562503954 35 25.713279323705528 31.96141653344894 23.27313698395065 19.052167158894882 36 34.98568473911905 23.171530242682056 20.19061424661988 21.652170771579012 37 27.409886110132675 25.7990805718879 25.39807263301451 21.392960684964912 38 35.99023672112788 23.791557157178854 19.221285934917496 20.996920186775768 39 27.147289132142955 23.369776284535 20.073653597781814 29.40928098554023 40 24.796560724704435 23.904227743607805 27.537459018614356 23.7617525130734 41 25.141797852259284 22.04798547700978 28.8759584902593 23.934258180471634 42 22.836453789254072 22.836453789254072 28.13039080210619 26.196701619385664 43 24.112860252345985 20.935052970981115 22.541116861300026 32.410969915372874 44 23.982126245247063 21.26132350683249 22.392771019047878 32.363779228872566 45 31.62137263933671 21.6103991112797 22.448541830366416 24.31968641901717 46 27.01158768435979 22.43318792279694 21.038691847075082 29.516532545768193 47 30.357610570713778 23.04757001833437 22.14439898483576 24.450420426116093 48 32.80813937735389 22.052952917694025 23.228655810550844 21.91025189440124 49 33.5981882389068 21.301063032306427 22.326613740844103 22.774134987942666 50 25.716892007839526 27.216607508963975 22.889515087472116 24.176985395724387 51 23.4856079695812 28.520109103060847 23.37000207729338 24.624280850064576 52 29.928830122560306 23.1746913412993 23.55831323777784 23.33816529836255 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 53.5 8 107.0 9 74.0 10 41.0 11 45.5 12 50.0 13 190.5 14 628.0 15 925.0 16 1030.5 17 1136.0 18 1081.5 19 1027.0 20 916.5 21 806.0 22 858.0 23 910.0 24 941.5 25 973.0 26 1178.5 27 1384.0 28 1661.5 29 1939.0 30 2831.0 31 3723.0 32 4182.0 33 4641.0 34 4547.5 35 4454.0 36 4558.0 37 4662.0 38 5376.0 39 6529.0 40 6968.0 41 7436.5 42 7905.0 43 8132.5 44 8360.0 45 9273.0 46 10186.0 47 11778.0 48 13370.0 49 12988.0 50 12606.0 51 14296.0 52 15986.0 53 18763.0 54 21540.0 55 24621.5 56 27703.0 57 31019.5 58 34336.0 59 41292.0 60 48248.0 61 46120.5 62 43993.0 63 39414.5 64 35201.0 65 35566.0 66 31200.0 67 26834.0 68 22171.0 69 17508.0 70 15566.5 71 13625.0 72 11548.5 73 9472.0 74 8877.5 75 8283.0 76 8276.5 77 8270.0 78 5444.0 79 2618.0 80 1700.5 81 783.0 82 638.5 83 494.0 84 328.5 85 163.0 86 93.0 87 23.0 88 14.0 89 3.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 442884.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.624479547691944 #Duplication Level Percentage of deduplicated Percentage of total 1 77.29963103412935 13.623657662051464 2 9.545710771753612 3.3647636852990854 3 3.4718663523624063 1.8356951255859324 4 1.6065388951521982 1.1325764760072614 5 0.8788562058009634 0.7744691612250612 6 0.5291073075740494 0.5595144552523912 7 0.33309418878753716 0.41094282024186923 8 0.28569232346007994 0.4028142809403817 9 0.1998565132725223 0.3170130327580134 >10 2.8364251306754125 13.474182856007442 >50 1.8947934816029517 24.193242474327363 >100 1.0863995080455058 32.220852412821415 >500 0.024341498411396944 2.8079587431471897 >1k 0.0064056574766834075 2.4464645369893696 >5k 0.0 0.0 >10k+ 0.0012811314953366814 2.435852277345761 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGAAG 10788 2.435852277345761 No Hit TTCCGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3102 0.7004091364781748 No Hit TTCCGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2689 0.607156727269443 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGGAG 2014 0.454746615366552 No Hit TTCCGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1943 0.4387153295219516 No Hit TTCCGCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1087 0.24543672835324826 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTC 999 0.22556696561627873 Illumina Single End Adapter 2 (100% over 25bp) TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 800 0.18063420669972272 No Hit TTCCGCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 784 0.17702152256572826 No Hit TTCCGCGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 764 0.17250566739823522 No Hit TTCCGCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 754 0.17024773981448865 No Hit TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 731 0.16505450637187166 No Hit TTCCGCGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGTCT 680 0.15353907569476433 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTA 676 0.1526359046612657 No Hit TTCCGCGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 623 0.14066888846740908 No Hit TTCCGCGGGAAGCAGTGGTATCAACAGATCGGAAGAGCTCGTATGCCGTCTT 622 0.1404430957090344 Illumina Single End Adapter 2 (100% over 27bp) TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGCAG 605 0.1366046188166653 No Hit TTCCGCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 602 0.13592724054154137 No Hit TTCCGCGGGGGGGCGGACCGCGCTGCTGGAGGTGTGAGGAGCTTAGACTCGG 578 0.13050821434054966 No Hit TTCCGCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 571 0.1289276650319271 No Hit TTCCGCGGGAAGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAA 561 0.12666973744818055 Illumina Single End Adapter 2 (100% over 34bp) TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 529 0.11944436918019165 No Hit TTCCGCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 529 0.11944436918019165 No Hit TTCCGCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 525 0.11854119814669305 No Hit TTCCGCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 503 0.11357375746245066 No Hit TTCCGCGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 496 0.11199320815382809 Illumina Single End Adapter 2 (97% over 34bp) TTCCGCGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTCGG 490 0.11063845160358017 No Hit TTCCGCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 489 0.11041265884520551 No Hit TTCCGCGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGAGA 481 0.10860631677820828 No Hit TTCCGCGGGCTCCTGGCCACTCAGGGAGCTTGGCTTCTTAAGTCTGACTCTT 475 0.10725156022796035 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGTAG 469 0.10589680367771245 No Hit TTCCGCGGGGGACGCTGTTGAGCTGGGAGGCGCGGTTGGAAGTCGTTACTTT 466 0.1052194254025885 No Hit TTCCGCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 466 0.1052194254025885 No Hit TTCCGCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTTCCGCGGGAAA 463 0.10454204712746452 No Hit TTCCGCGGGATGATATCTGTCGTAGAAACCTCGACATTGAGCGCCCAACCTA 462 0.10431625436908988 No Hit TTCCGCGGGGCTCTCGAACCAGGCTGCTTCAGCCGTGAACAACGCCGAAATG 454 0.10250991230209267 No Hit TTCCGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTGCT 445 0.10047777747672078 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.006322197234490295 0.0 0.0 0.0 0.0 8 0.014902322052727126 0.0 0.0 0.0 0.0 9 0.02528878893796118 0.0 0.0 0.0 0.0 10 0.0731568537133877 0.0 0.0 0.0 0.0 11 0.20140714047019084 0.0 0.0 0.0 0.0 12 0.2142773276975461 0.0 0.0 0.0 0.0 13 0.2704997245328348 0.0 0.0 0.0 0.0 14 0.46987473017765374 0.0 0.0 0.0 0.0 15 0.5351288373479286 0.0 0.0 0.0 0.0 16 0.7891456905194136 0.0 0.0 0.0 0.0 17 0.9033968262569883 0.0 0.0 0.0 0.0 18 0.947200621381671 0.0 0.0 0.0 0.0 19 1.0212606461285574 0.0 0.0 0.0 0.0 20 1.0810957270978405 0.0 0.0 0.0 0.0 21 1.1215126308469034 0.0 0.0 0.0 0.0 22 1.1504141039188591 0.0 0.0 0.0 0.0 23 1.194217899043542 0.0 0.0 0.0 0.0 24 1.265794203448307 0.0 0.0 0.0 0.0 25 1.2946956765202626 0.0 0.0 0.0 0.0 26 1.4870711066554674 0.0 0.0 0.0 0.0 27 1.551873628308993 0.0 0.0 0.0 0.0 28 1.861887085557392 0.0 0.0 0.0 0.0 29 1.8955302065552153 0.0 0.0 0.0 0.0 30 2.0212967729698974 0.0 0.0 0.0 0.0 31 2.04229549949874 0.0 0.0 0.0 0.0 32 2.1350963231907225 0.0 0.0 0.0 0.0 33 2.184319144516397 0.0 0.0 0.0 0.0 34 2.2204459858563417 0.0 0.0 0.0 0.0 35 2.4588831386999757 0.0 0.0 0.0 0.0 36 2.4927520524561735 0.0 0.0 0.0 0.0 37 2.561393051002068 0.0 0.0 0.0 0.0 38 2.618970204387605 0.0 0.0 0.0 0.0 39 2.665031927096034 0.0 0.0 0.0 0.0 40 2.692578643617742 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATTA 20 6.307231E-4 46.000004 38 TATTTCG 35 1.01767E-7 46.000004 19 AACCGTA 20 6.307231E-4 46.000004 41 ACACGTT 20 6.307231E-4 46.000004 40 CGAACCA 20 6.307231E-4 46.000004 15 GTACATA 20 6.307231E-4 46.000004 12 TTAATGC 20 6.307231E-4 46.000004 26 GTATTAG 20 6.307231E-4 46.000004 28 CCGATCA 20 6.307231E-4 46.000004 29 TTAGCGA 20 6.307231E-4 46.000004 27 TCATTCG 20 6.307231E-4 46.000004 27 TCCGAAT 20 6.307231E-4 46.000004 15 TTTCGAC 20 6.307231E-4 46.000004 20 ATAATAG 20 6.307231E-4 46.000004 33 CGGTTCA 20 6.307231E-4 46.000004 42 TCTTATA 20 6.307231E-4 46.000004 18 TTCACTA 20 6.307231E-4 46.000004 26 CCGGATA 55 1.8189894E-12 46.000004 20 ATAGCGC 20 6.307231E-4 46.000004 37 ATTAAGC 20 6.307231E-4 46.000004 22 >>END_MODULE