##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527861_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3121914 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95257909090385 33.0 31.0 34.0 30.0 34.0 2 31.833776010485874 31.0 31.0 34.0 30.0 34.0 3 32.721599634070635 34.0 31.0 34.0 31.0 34.0 4 36.41274967856258 37.0 37.0 37.0 35.0 37.0 5 36.16710101559492 37.0 37.0 37.0 35.0 37.0 6 35.12661879859599 35.0 35.0 37.0 33.0 37.0 7 36.28095745110211 37.0 35.0 37.0 35.0 37.0 8 36.60885149302639 37.0 37.0 37.0 35.0 37.0 9 38.62941259752831 39.0 39.0 39.0 38.0 39.0 10 37.98763034471801 39.0 38.0 39.0 35.0 39.0 11 37.65906652137119 39.0 37.0 39.0 35.0 39.0 12 37.496797797761246 39.0 37.0 39.0 35.0 39.0 13 37.11547339228435 39.0 37.0 39.0 34.0 39.0 14 38.16983299347772 40.0 38.0 40.0 34.0 40.0 15 38.22701490175578 40.0 38.0 40.0 35.0 40.0 16 38.1977072398535 40.0 38.0 40.0 35.0 40.0 17 38.24322034495505 40.0 38.0 40.0 35.0 40.0 18 38.01829102275079 40.0 38.0 40.0 34.0 40.0 19 38.14256927000552 40.0 38.0 40.0 34.0 40.0 20 38.101586718916664 40.0 38.0 40.0 34.0 40.0 21 38.11942897850485 40.0 38.0 40.0 34.0 40.0 22 38.23981378090492 40.0 38.0 40.0 34.0 40.0 23 38.08345553400895 40.0 38.0 40.0 34.0 40.0 24 37.9034637084814 39.0 38.0 40.0 34.0 40.0 25 37.551296416236966 39.0 37.0 40.0 34.0 40.0 26 37.019435512957756 39.0 35.0 40.0 33.0 40.0 27 36.740610407589706 38.0 35.0 40.0 33.0 40.0 28 36.615387227194596 39.0 35.0 40.0 32.0 40.0 29 36.56831834573278 39.0 35.0 40.0 31.0 40.0 30 36.53478891474909 39.0 35.0 40.0 31.0 40.0 31 36.34384579459908 39.0 35.0 40.0 31.0 40.0 32 36.201490495894504 39.0 35.0 40.0 30.0 40.0 33 35.99085817226227 39.0 35.0 40.0 30.0 40.0 34 35.548036557060826 39.0 35.0 40.0 25.0 40.0 35 35.33368984539612 39.0 35.0 40.0 24.0 40.0 36 34.96549648709093 39.0 35.0 40.0 21.0 40.0 37 34.49033189255053 39.0 35.0 40.0 17.0 40.0 38 34.08434537274249 39.0 34.0 40.0 15.0 40.0 39 33.63004330035997 39.0 34.0 40.0 10.0 40.0 40 33.14024921890866 38.0 33.0 40.0 10.0 40.0 41 32.77870754927906 37.0 33.0 40.0 10.0 40.0 42 32.41009137343309 36.0 33.0 40.0 9.0 40.0 43 32.13212471579935 35.0 32.0 40.0 9.0 40.0 44 31.75162320294537 35.0 31.0 40.0 9.0 40.0 45 31.57854060041372 35.0 31.0 40.0 9.0 40.0 46 31.36578329832276 35.0 31.0 40.0 9.0 40.0 47 31.186044522687045 35.0 30.0 39.0 9.0 40.0 48 30.9761815988525 35.0 30.0 39.0 8.0 40.0 49 30.730075203865322 35.0 28.0 39.0 8.0 40.0 50 29.920262377503033 35.0 26.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 13.0 12 29.0 13 32.0 14 37.0 15 52.0 16 176.0 17 396.0 18 852.0 19 1909.0 20 3706.0 21 6611.0 22 10925.0 23 17981.0 24 28562.0 25 41883.0 26 56222.0 27 75882.0 28 99730.0 29 112056.0 30 97630.0 31 77283.0 32 79888.0 33 94169.0 34 153968.0 35 193665.0 36 302883.0 37 607646.0 38 809702.0 39 248023.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.45494975197907 0.29190426129611513 0.19148509536137126 0.061660891363439226 8 98.17387666668589 1.281969970985748 0.311731841428047 0.23242152090031948 9 94.90309470408218 2.7769823255861628 1.1148929791147355 1.2050299912169267 10 46.135800025240925 34.5583190312097 9.180842265353881 10.12503867819549 11 26.156389958211534 44.47797088580916 16.71397738694916 12.651661769030154 12 36.673591905478496 30.3717206816075 18.437727624784024 14.516959788129974 13 21.498926620015798 31.323604686099614 26.35248760856321 20.824981085321376 14 29.09952035834427 33.99225603267739 18.59804594232897 18.31017766664937 15 24.17122957262756 32.684628724558074 19.11676618894691 24.027375513867455 16 24.98925338750523 39.342595600006916 20.764473332705514 14.90367767978234 17 32.49977417699527 31.74661441666875 19.16564645919138 16.587964947144602 18 24.818524789600225 33.34367955042964 24.92192289729954 16.915872762670592 19 29.562313375704775 30.742518852216943 21.400173098938662 18.29499467313962 20 20.118555475903566 31.803246341827478 24.255376669568733 23.82282151270022 21 21.945063188800205 32.62396081378283 30.632041753872784 14.798934243544185 22 20.06692048531766 31.9567419217826 30.450806780712085 17.52553081218765 23 21.61299126113019 38.287761930661766 25.800550559688705 14.298696248519338 24 24.030386487263904 30.448724724640076 31.26511492629201 14.255773861804007 25 24.722173640913876 29.94928752041216 28.174446829733295 17.15409200894067 26 32.15197471807359 28.94166847645387 23.983876557778338 14.922480247694203 27 27.908135842306997 28.673051211532414 26.506431631364606 16.912381314795986 28 35.54643081135483 32.19470491499766 16.88608334502488 15.372780928622634 29 34.60566178312407 31.85548993341905 18.412582793760492 15.126265489696387 30 31.873459678902112 34.85294598121537 17.211140345313805 16.062453994568717 31 27.7628723917443 39.55733566011107 16.734862010933035 15.944929937211597 32 25.87854758330947 41.649834044115245 17.662626196621687 14.808992175953598 33 25.6271633363379 42.14738138206241 17.34512866145576 14.880326620143924 34 23.2872846593468 43.452446159631556 17.934318498203346 15.325950682818295 35 22.65132864005863 45.163800155929984 17.690685906146037 14.494185297865346 36 23.34417283756055 43.85015090101777 17.244261052674737 15.561415208746944 37 24.284941865791307 43.45651417687995 17.073628549665365 15.184915407663377 38 25.061388622492487 42.05666780058643 16.86090648236947 16.021037094551613 39 24.731590940685745 40.21696305535642 17.20156288738255 17.84988311657528 40 23.99569622994099 39.585107084948525 18.74769772645883 17.671498958651647 41 23.449909254386892 39.08845663269392 19.669728250041484 17.79190586287771 42 23.50926386825518 39.23631464543866 18.90791994910814 18.346501537198016 43 23.275368892288512 38.46588983553038 20.344090195950304 17.9146510762308 44 23.602251695594433 38.66621566128984 19.797278208176138 17.934254434939593 45 24.237695208772568 38.816411983161615 19.062696794338347 17.883196013727478 46 23.618651891115512 39.497756824819646 19.033772230753314 17.849819053311528 47 23.8789729633808 39.082306559373514 18.81230552795497 18.226414949290724 48 24.1710373828363 38.63434418757211 19.00484766716828 18.189770762423308 49 24.00469711849846 38.10973012068878 19.282401757383454 18.603171003429306 50 22.128892724142947 38.62444641332208 19.793562538878394 19.45309832365658 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 116.5 2 233.0 3 288.5 4 344.0 5 996.0 6 1648.0 7 15711.0 8 29774.0 9 22269.5 10 14765.0 11 13112.0 12 11459.0 13 12534.0 14 13609.0 15 16803.5 16 19998.0 17 23689.0 18 27380.0 19 33441.5 20 39503.0 21 48848.5 22 58194.0 23 71462.5 24 84731.0 25 97000.0 26 109269.0 27 139911.0 28 170553.0 29 193586.5 30 216620.0 31 182835.5 32 149051.0 33 128759.0 34 108467.0 35 110316.5 36 112166.0 37 107149.5 38 102133.0 39 96709.0 40 91285.0 41 93589.0 42 95893.0 43 106491.0 44 117089.0 45 121771.5 46 126454.0 47 149756.5 48 173059.0 49 187358.5 50 201658.0 51 192958.0 52 184258.0 53 168906.5 54 153555.0 55 147245.0 56 140935.0 57 138548.0 58 136161.0 59 129916.5 60 123672.0 61 112330.0 62 100988.0 63 82630.0 64 64272.0 65 55348.5 66 46425.0 67 40308.0 68 34191.0 69 28261.5 70 22332.0 71 23574.0 72 24816.0 73 16859.0 74 8902.0 75 6265.5 76 3629.0 77 2585.5 78 1542.0 79 1056.5 80 571.0 81 418.0 82 265.0 83 152.5 84 40.0 85 28.0 86 16.0 87 9.5 88 3.0 89 4.5 90 6.0 91 3.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3121914.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.355678669259728 #Duplication Level Percentage of deduplicated Percentage of total 1 75.69215720260517 16.921495442045345 2 10.217404652648602 4.568340304968229 3 3.8285581091304586 2.5677004456292747 4 1.973457851305311 1.764719583644371 5 1.1426569314879689 1.2772435594773681 6 0.7746239027138138 1.0390345835158756 7 0.5623686299016617 0.8800492668627379 8 0.47751722340903396 0.8540177284455578 9 0.3719650681389915 0.7483978385554134 >10 3.601942833579306 18.96851687902768 >50 0.8736177262023158 13.36315156396547 >100 0.4391424178284196 17.563115888632897 >500 0.026840472177538103 4.129303607743058 >1k 0.014813593934051085 6.492990230114593 >5k 0.001613361715589722 2.5404188232174807 >10k+ 0.0013200232218461363 6.321504254154611 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATTGTGGGGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAA 68209 2.184845578705884 No Hit TATTGTGGGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAA 26700 0.8552445711188713 No Hit TATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 20460 0.6553671882056968 No Hit TATTGTGGGGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAA 18107 0.579996758398854 No Hit TATTGTGGGCAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAA 13346 0.42749415903192717 No Hit TATTGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTATTGTGGGA 12656 0.4053923330367204 No Hit TATTGTGGGGAGTGCAGTGCTTATTGTGGGTAAAAAAAAAAAAAAAAAAA 12237 0.39197107928021074 No Hit TATTGTGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 10959 0.3510346537412626 Illumina Single End Adapter 2 (100% over 34bp) TATTGTGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 10120 0.3241601145963662 Illumina Single End Adapter 2 (97% over 34bp) TATTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9718 0.31128339858176746 No Hit TATTGTGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 8813 0.2822947717329818 Illumina Single End Adapter 2 (97% over 34bp) TATTGTGGGGAGTGCAGTGCTTATTGTGGGGAAAAAAAAAAAAAAAAAAA 8709 0.27896348201776217 No Hit TATTGTGGGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAA 7277 0.23309418516973884 No Hit TATTGTGGGAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAA 7107 0.22764880775062987 No Hit TATTGTGGGGAGTGCAGTGCTTATTGTGGGCAAAAAAAAAAAAAAAAAAA 6801 0.21784712839623385 No Hit TATTGTGGGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAA 6438 0.20621964602484244 No Hit TATTGTGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAA 6016 0.19270229737270148 Illumina Single End Adapter 2 (100% over 34bp) TATTGTGGGGAGTGCAGTGCTTATTGGGGGAAAAAAAAAAAAAAAAAAAA 5978 0.19148509536137126 No Hit TATTGTGGGACGCAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAA 5486 0.1757255324778325 No Hit TATTGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 5135 0.16448242968896645 No Hit TATTGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4963 0.15897298900610332 No Hit TATTGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4797 0.15365573811450284 No Hit TATTGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4650 0.14894708822856748 No Hit TATTGTGGGAGTGCAGTGCTTATTGTGGGTAAAAAAAAAAAAAAAAAAAA 4428 0.14183606595184878 No Hit TATTGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4227 0.1353977079445494 No Hit TATTGTGGGGAGTGCAGTGCTTATTGGGGAAAAAAAAAAAAAAAAAAAAA 4204 0.13466098041137584 No Hit TATTGTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 3992 0.12787027445342825 No Hit TATTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 3828 0.122617086825582 No Hit TATTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 3811 0.12207254908367111 No Hit TATTGTGGGGCAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAA 3799 0.12168816950114576 No Hit TATTGTGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 3630 0.11627482371391396 Illumina Single End Adapter 2 (100% over 34bp) TATTGTGGGGAGTGCAGTGCTTATTGTGGGGAGTGCAGTGCTTATTGTGG 3511 0.11246305952053771 No Hit TATTGTGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTC 3470 0.11114976261357616 No Hit TATTGTGGGAGTGCAGTGCTTATTGTGGGGAAAAAAAAAAAAAAAAAAAA 3275 0.10490359439753946 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.016047847570432754 0.0 0.0 0.0 0.0 8 0.16928717447053315 0.0 0.0 0.0 0.0 9 0.23604109530243306 0.0 0.0 0.0 0.0 10 0.6855730170658129 0.0 0.0 0.0 0.0 11 1.1475332119975117 0.0 0.0 0.0 0.0 12 1.2810730852931886 0.0 0.0 0.0 0.0 13 1.4044909629156985 0.0 0.0 0.0 0.0 14 1.517754813233164 0.0 0.0 0.0 0.0 15 1.6574127282173692 0.0 0.0 0.0 0.0 16 1.832657786217045 0.0 0.0 0.0 0.0 17 1.9537053230806487 0.0 0.0 0.0 0.0 18 2.0765145996974934 0.0 0.0 0.0 0.0 19 2.1972738518742028 0.0 0.0 0.0 0.0 20 2.33779662091909 0.0 0.0 0.0 3.203163187711128E-5 21 2.4865194877245176 0.0 0.0 0.0 3.203163187711128E-5 22 2.660451248817232 0.0 0.0 0.0 3.203163187711128E-5 23 2.8439604678412027 0.0 0.0 0.0 3.203163187711128E-5 24 3.029199394986537 0.0 0.0 0.0 3.203163187711128E-5 25 3.202746776496726 0.0 0.0 0.0 3.203163187711128E-5 26 3.378888720188961 0.0 0.0 0.0 3.203163187711128E-5 27 3.535395273540527 0.0 0.0 0.0 3.203163187711128E-5 28 3.7166622783330996 0.0 0.0 0.0 3.203163187711128E-5 29 3.875090729597292 0.0 0.0 0.0 3.203163187711128E-5 30 4.043481018375266 3.203163187711128E-5 0.0 0.0 3.203163187711128E-5 31 4.219719056963132 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 32 4.382760063217629 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 33 4.520560143552961 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 34 4.656214104552528 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 35 4.807307312116862 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 36 4.932903340707015 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 37 5.065674454837641 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 38 5.202353428057275 3.203163187711128E-5 0.0 0.0 6.406326375422256E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATAG 35 1.4471516E-7 44.0 21 CCGAATA 40 8.3200575E-9 44.0 23 CGCAATT 20 7.8585616E-4 44.0 27 TGGGGCT 10365 0.0 39.203087 6 TGGGATT 4875 0.0 39.035896 6 GTGGGGG 33610 0.0 38.848557 5 GTGGGGC 23585 0.0 38.69239 5 GTGGGGT 33600 0.0 37.897617 5 TGTGGGG 158270 0.0 37.797688 4 GTGGGAT 15700 0.0 37.792355 5 CGACTAT 35 7.294224E-6 37.714287 14 TATCGGG 35 7.294224E-6 37.714287 36 TGGGGAG 44140 0.0 37.605347 6 TGGGGTT 3580 0.0 37.547485 6 TGGGGTC 4140 0.0 37.41063 6 TGGGGTG 22335 0.0 36.750393 6 TACGGTT 30 1.301607E-4 36.666668 20 GTGGGAC 11600 0.0 36.622414 5 TGGGGAC 4865 0.0 36.53854 6 GTGGGAG 37975 0.0 36.410797 5 >>END_MODULE