##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527858_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 471399 Sequences flagged as poor quality 0 Sequence length 50 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26839471445633 33.0 31.0 34.0 31.0 34.0 2 32.80098175855273 34.0 31.0 34.0 31.0 34.0 3 32.938506445707354 34.0 31.0 34.0 31.0 34.0 4 36.40872169860352 37.0 37.0 37.0 35.0 37.0 5 36.45754445809177 37.0 37.0 37.0 35.0 37.0 6 35.483238191001675 37.0 35.0 37.0 33.0 37.0 7 36.276390064467684 37.0 35.0 37.0 35.0 37.0 8 36.60519432582589 37.0 37.0 37.0 35.0 37.0 9 38.737890831333964 39.0 39.0 39.0 39.0 39.0 10 38.17784297378654 39.0 39.0 39.0 37.0 39.0 11 37.752846314905206 39.0 38.0 39.0 35.0 39.0 12 36.95783402170985 39.0 35.0 39.0 34.0 39.0 13 36.76824515962062 39.0 35.0 39.0 33.0 39.0 14 37.49653902532674 40.0 36.0 40.0 33.0 40.0 15 37.57810262643748 40.0 36.0 40.0 33.0 40.0 16 37.58101523337979 40.0 36.0 40.0 33.0 40.0 17 37.33980343615494 39.0 36.0 40.0 33.0 40.0 18 37.25737856889811 39.0 36.0 40.0 33.0 40.0 19 37.20459950063534 39.0 36.0 40.0 32.0 40.0 20 36.995564267213126 39.0 35.0 40.0 32.0 40.0 21 37.00653374317722 39.0 35.0 40.0 32.0 40.0 22 37.051527474602196 39.0 35.0 40.0 32.0 40.0 23 37.03357877297152 39.0 35.0 40.0 32.0 40.0 24 36.9584492118142 39.0 35.0 40.0 32.0 40.0 25 36.93632994554507 38.0 35.0 40.0 32.0 40.0 26 36.76674748991831 38.0 35.0 40.0 32.0 40.0 27 36.68692763455162 38.0 35.0 40.0 32.0 40.0 28 36.40417353452171 38.0 35.0 40.0 31.0 40.0 29 36.75551072446059 39.0 35.0 40.0 32.0 40.0 30 36.96501053247886 39.0 35.0 40.0 32.0 40.0 31 37.00307595052175 39.0 35.0 40.0 33.0 40.0 32 36.97438051417165 39.0 35.0 40.0 33.0 40.0 33 36.82607939346499 39.0 35.0 40.0 32.0 40.0 34 36.36753153909957 39.0 35.0 40.0 31.0 40.0 35 36.37027019573652 39.0 35.0 40.0 31.0 40.0 36 36.41696100331142 39.0 35.0 40.0 31.0 40.0 37 36.35619507041805 38.0 35.0 40.0 31.0 40.0 38 36.30624799798048 38.0 35.0 40.0 31.0 40.0 39 36.27727466541083 38.0 35.0 40.0 31.0 40.0 40 36.03526099970513 38.0 35.0 40.0 31.0 40.0 41 35.87514398630459 38.0 35.0 40.0 30.0 40.0 42 35.79274033249965 37.0 35.0 40.0 30.0 40.0 43 35.69529421997077 37.0 35.0 40.0 30.0 40.0 44 35.36485440147306 37.0 34.0 40.0 29.0 40.0 45 35.274275083315835 36.0 34.0 40.0 29.0 40.0 46 35.077749422463775 36.0 34.0 40.0 29.0 40.0 47 35.02100768139093 36.0 34.0 40.0 29.0 40.0 48 34.90320089775329 35.0 34.0 40.0 29.0 40.0 49 34.78334277331942 35.0 34.0 39.0 28.0 40.0 50 34.23007685633614 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 5.0 16 19.0 17 34.0 18 67.0 19 121.0 20 213.0 21 397.0 22 585.0 23 879.0 24 1431.0 25 2007.0 26 2702.0 27 3470.0 28 4555.0 29 5861.0 30 7754.0 31 10590.0 32 14416.0 33 21984.0 34 48459.0 35 41611.0 36 48119.0 37 76372.0 38 141200.0 39 38547.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.19134321455921 0.6603747568408078 0.10882500811414533 0.039457020485830475 8 99.41450872827477 0.45290719751208636 0.08442953845892757 0.04815453575421246 9 98.74522432164684 0.7199845566070356 0.27428993273214414 0.26050118901397756 10 67.9978107717666 25.21685451178301 2.2015320354943477 4.5838026809560475 11 42.41269073544917 24.31146438579632 17.929609523991353 15.346235354763163 12 35.01089310753735 16.752899348534893 24.90544103827119 23.330766505656566 13 27.184190038587268 16.199652523658305 27.69585849779062 28.92029893996381 14 24.98817350058019 16.99706617960581 31.10783009722125 26.906930222592752 15 27.614186708075323 18.35345429243592 28.776896005294876 25.255462994193877 16 33.96973688955641 18.10504477099018 23.915621373825573 24.009596965627843 17 33.11631972066127 21.58914210679276 21.816126041845653 23.478412130700317 18 33.1521704543285 21.137083447355636 22.048201205348334 23.66254489296753 19 31.14049881310737 23.46207777275726 20.75078648872823 24.64663692540714 20 32.53804102257323 23.52656666645453 20.92388825602091 23.011504054951327 21 33.3104228053093 21.603142985029667 22.78664146508584 22.29979274457519 22 30.60698049847369 20.842852869861836 24.231489672230953 24.318676959433517 23 32.25675065072264 20.42982696187306 23.56729649405281 23.74612589335149 24 31.734475465582236 21.238271612795106 22.715364266788857 24.3118886548338 25 30.336296852560146 20.49304304845789 21.629235530834812 27.541424568147153 26 28.06900311625608 21.511288738414805 24.038659394695365 26.381048750633752 27 25.360257446451946 19.707084656522394 23.259065038322102 31.673592858703557 28 27.32907791488739 23.151088568282923 21.330550128447452 28.18928338838224 29 31.044401876117682 22.830341175946494 20.788970702101615 25.33628624583421 30 29.045458306021015 20.565168784829837 24.30128192889675 26.0880909802524 31 32.14813777712723 20.643870691282757 22.08468834257179 25.12330318901822 32 34.39676367578209 21.10462686598826 21.316337115691802 23.18227234253785 33 34.495194092477924 20.02146801329659 22.51532141561607 22.968016478609414 34 30.134132656199945 22.346250204179473 25.647699719346033 21.871917420274546 35 28.09955048695479 26.426657672163074 24.890379487440576 20.583412353441563 36 29.27838200759866 27.662341243829538 21.258848661112985 21.80042808745882 37 30.309567903198776 26.744223046718385 19.690113895023114 23.25609515505973 38 30.006427675917852 27.41244678075261 20.240815105674812 22.340310437654725 39 30.13243558005002 24.221519349850126 21.152993536261214 24.49305153383864 40 30.107615841357322 22.838614422177393 19.135382128515335 27.918387607949953 41 25.776253237703088 25.048419703902642 21.060290751571387 28.115036306822883 42 23.69818349211602 24.162333819121383 22.02826056058668 30.111222128175918 43 25.90989798450994 19.823122238273736 24.691821577898978 29.575158199317354 44 26.920506831792174 20.575563376248144 23.865769761921428 28.638160030038247 45 28.316988368664337 22.367463656053577 22.414981788251566 26.900566187030524 46 28.12097607334763 24.246126954024085 21.899070638673397 25.73382633395489 47 25.238280098175853 23.512777922736365 23.249731119497497 27.999210859590285 48 28.100399025029756 21.104839000507 25.547784361019012 25.246977613444237 49 28.865356099609883 20.80848707782579 24.624999204495555 25.70115761806877 50 25.211763283333227 21.741454691248816 24.870650977197663 28.1761310482203 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 2.0 8 4.0 9 4.5 10 5.0 11 27.0 12 49.0 13 157.0 14 265.0 15 477.5 16 690.0 17 625.0 18 560.0 19 561.5 20 563.0 21 539.0 22 515.0 23 523.5 24 532.0 25 560.0 26 588.0 27 829.5 28 1071.0 29 1321.0 30 1571.0 31 1956.0 32 2341.0 33 2726.5 34 3112.0 35 3881.0 36 4650.0 37 5303.5 38 5957.0 39 6083.5 40 6210.0 41 7134.0 42 8058.0 43 9200.0 44 10342.0 45 9986.0 46 9630.0 47 12175.5 48 14721.0 49 14555.5 50 14390.0 51 15876.5 52 17363.0 53 19533.5 54 21704.0 55 24204.0 56 26704.0 57 29894.0 58 33084.0 59 38823.0 60 44562.0 61 46962.0 62 49362.0 63 47345.5 64 45329.0 65 47141.0 66 48953.0 67 41523.0 68 34093.0 69 27491.0 70 20889.0 71 18012.0 72 15135.0 73 12849.0 74 10563.0 75 8564.5 76 6566.0 77 6715.5 78 6865.0 79 4869.0 80 2873.0 81 1824.0 82 775.0 83 584.5 84 394.0 85 312.0 86 230.0 87 153.5 88 77.0 89 53.0 90 29.0 91 26.5 92 24.0 93 12.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 471399.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.666970019028467 #Duplication Level Percentage of deduplicated Percentage of total 1 68.69431643625192 6.640658974669017 2 9.141979372394118 1.7675048101502124 3 3.37502743032697 0.978788669471085 4 1.6150976519640112 0.6245240231735749 5 0.8865481676541584 0.4285117278568686 6 0.5420232609172702 0.31438335677419765 7 0.40816326530612246 0.2761991434008133 8 0.3445249067368883 0.2664409555387262 9 0.2852754004827737 0.24819738692699816 >10 8.775510204081632 25.055632277539836 >50 4.2089093701996925 28.175918913701558 >100 1.6545973228000876 27.18206869339986 >500 0.04827737546631556 3.311844106584868 >1k 0.017555409260478386 3.257113400749683 >5k 0.0021944261575597983 1.4722135600627069 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCAGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 6940 1.4722135600627069 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 3913 0.8300823718336271 No Hit GCAGGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2613 0.5543074974702958 No Hit GCAGGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2361 0.5008495987475577 No Hit GCAGGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1688 0.3580830676348486 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1231 0.26113759257020064 No Hit GCAGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1216 0.25795557478908526 No Hit GCAGGAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 1189 0.2522279427830776 No Hit GCAGGAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1143 0.2424697549209905 No Hit GCAGGAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 1000 0.21213451874102407 No Hit GCAGGAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 999 0.21192238422228304 No Hit GCAGGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 922 0.19558802627922417 No Hit GCAGGAGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 844 0.1790415338174243 No Hit GCAGGAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACAGCT 831 0.176283785073791 No Hit GCAGGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 803 0.17034401854904233 No Hit GCAGGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 772 0.16376784846807058 No Hit GCAGGAGGGGGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCCAT 747 0.15846448549954498 No Hit GCAGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGC 718 0.15231258445605528 No Hit GCAGGAGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTC 701 0.14870629763745785 No Hit GCAGGAGGGGAAAATCCTTTCCTTTATGCCCTGTCCCTTCCCCAGCACTC 680 0.14425147274389635 No Hit GCAGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 678 0.14382720370641433 No Hit GCAGGAGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCC 673 0.14276653111270918 No Hit GCAGGAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 659 0.13979664785033485 No Hit GCAGGAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 642 0.13619036103173743 No Hit GCAGGAGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAG 635 0.13470541940055028 No Hit GCAGGAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 595 0.1262200386509093 No Hit GCAGGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 582 0.123462289907276 No Hit GCAGGAGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGC 562 0.11921959953245552 No Hit GCAGGAGGGGAGCCGGGCGTGGTGGCGCATGCCTTTAATCCCAGCACTCG 532 0.11285556397022481 No Hit GCAGGAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 528 0.11200702589526071 No Hit GCAGGAGGGGGGTGCTGGAGAGATGGCTCAGCGGTTAAGAGCGTTGACTG 509 0.10797647003918125 No Hit GCAGGAGGGGGGCTGGAAAGTTGGCTCAGCGGTTAAGAACACTGACTGCT 499 0.10585512485177101 No Hit GCAGGAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 491 0.10415804870184281 No Hit GCAGGAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 487 0.10330951062687871 No Hit GCAGGAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 485 0.10288524158939666 No Hit GCAGGAGGGGACTGTCCCCATAGTAGAGGCCACAGGAAGACCGTCGTGGA 483 0.10246097255191462 No Hit GCAGGAGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 476 0.10097603092072746 No Hit GCAGGAGGGGGTCTTCCGGTCGGGCCGAGCTCGTCGCTAGGTTTGTTGAA 476 0.10097603092072746 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.030547370698707464 0.0 0.0 0.0 0.0 7 0.031183774254930536 0.0 0.0 0.0 0.0 8 0.03606286818597409 0.0 0.0 0.0 0.0 9 0.04263903826694584 0.0 0.0 0.0 0.0 10 0.05494284035392523 0.0 0.0 0.0 0.0 11 0.08018684808410709 0.0 0.0 0.0 0.0 12 0.09418772632101469 0.0 0.0 0.0 0.0 13 0.10543085581428896 0.0 0.0 0.0 0.0 14 0.11709825434504528 0.0 0.0 0.0 0.0 15 0.12982632546950673 0.0 0.0 0.0 0.0 16 0.14234226207522716 0.0 0.0 0.0 0.0 17 0.15634314031213473 0.0 0.0 0.0 0.0 18 0.16525279009925775 0.0 0.0 0.0 0.0 19 0.18264782063602172 0.0 0.0 0.0 0.0 20 0.19855790954159852 0.0 0.0 0.0 0.0 21 0.21319519133472917 0.0 0.0 0.0 0.0 22 0.22146843756562912 0.0 0.0 0.0 0.0 23 0.23928773713987514 0.0 0.0 0.0 0.0 24 0.25180367374559554 0.0 0.0 0.0 0.0 25 0.26580455198250313 0.0 0.0 0.0 0.0 26 0.28171464088807996 0.0 0.0 0.0 0.0 27 0.29316990490009526 0.0 0.0 0.0 0.0 28 0.3137469532179746 0.0 0.0 0.0 0.0 29 0.3273235624174001 0.0 0.0 0.0 0.0 30 0.3409001716168257 0.0 0.0 0.0 0.0 31 0.35384037726002815 0.0 0.0 0.0 0.0 32 0.3686897935718998 0.0 0.0 0.0 0.0 33 0.38247853729006637 0.0 0.0 0.0 0.0 34 0.39732795360193807 0.0 0.0 0.0 0.0 35 0.41302590798877387 0.0 0.0 0.0 0.0 36 0.43063307304427884 0.0 0.0 0.0 0.0 37 0.4461188929123736 0.0 0.0 0.0 0.0 38 0.4599076366305402 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAC 60 0.0 44.000004 11 GATAACC 30 2.5245263E-6 44.000004 9 CTCAAAT 30 2.5245263E-6 44.000004 24 TAACGAA 30 2.5245263E-6 44.000004 32 TACGACA 30 2.5245263E-6 44.000004 43 CGCTAAG 30 2.5245263E-6 44.000004 44 TCGTAAG 30 2.5245263E-6 44.000004 14 TTAGTCT 30 2.5245263E-6 44.000004 39 CGTAACT 30 2.5245263E-6 44.000004 42 ACGTAAC 30 2.5245263E-6 44.000004 41 ACGCGAT 25 4.438832E-5 44.0 12 AACGTTG 20 7.85175E-4 44.0 22 CTAGATG 40 8.294592E-9 44.0 29 ACAACCG 25 4.438832E-5 44.0 36 AACGTAC 40 8.294592E-9 44.0 43 AGCGTAT 25 4.438832E-5 44.0 20 AATCCGT 35 1.4436591E-7 44.0 24 GCGACGT 20 7.85175E-4 44.0 16 CGTATAT 20 7.85175E-4 44.0 19 AATCACT 25 4.438832E-5 44.0 40 >>END_MODULE