##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527856_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 723581 Sequences flagged as poor quality 0 Sequence length 52 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.971393665671155 31.0 31.0 34.0 31.0 34.0 2 32.50401682741808 34.0 31.0 34.0 31.0 34.0 3 32.63984819944139 34.0 31.0 34.0 31.0 34.0 4 36.282171588253426 37.0 37.0 37.0 35.0 37.0 5 36.29075804920251 37.0 37.0 37.0 35.0 37.0 6 35.10487008365339 37.0 35.0 37.0 32.0 37.0 7 36.16454964959002 37.0 35.0 37.0 35.0 37.0 8 36.53527801310427 37.0 37.0 37.0 35.0 37.0 9 38.62996264412692 39.0 39.0 39.0 38.0 39.0 10 37.90763715465165 39.0 38.0 39.0 35.0 39.0 11 37.50372245816294 39.0 37.0 39.0 35.0 39.0 12 36.7077244980175 39.0 35.0 39.0 33.0 39.0 13 36.41044333668242 39.0 35.0 39.0 33.0 39.0 14 37.31494469865848 40.0 36.0 40.0 33.0 40.0 15 37.45891061263355 40.0 36.0 40.0 33.0 40.0 16 37.518815447061215 40.0 36.0 40.0 33.0 40.0 17 37.3827187281037 40.0 36.0 40.0 33.0 40.0 18 37.392504778317836 40.0 36.0 40.0 33.0 40.0 19 37.33117646814939 40.0 35.0 40.0 33.0 40.0 20 37.23172664843328 39.0 35.0 40.0 32.0 40.0 21 37.29245792799977 39.0 35.0 40.0 33.0 40.0 22 37.17354656907796 39.0 35.0 40.0 33.0 40.0 23 37.22094416520058 39.0 35.0 40.0 33.0 40.0 24 37.197765004885426 39.0 35.0 40.0 33.0 40.0 25 37.16049896279753 39.0 35.0 40.0 33.0 40.0 26 36.950617829931964 39.0 35.0 40.0 32.0 40.0 27 36.894488661255615 39.0 35.0 40.0 32.0 40.0 28 36.74320497636063 39.0 35.0 40.0 32.0 40.0 29 36.68209226057622 38.0 35.0 40.0 32.0 40.0 30 36.51177822524362 38.0 35.0 40.0 31.0 40.0 31 36.37757072117704 38.0 35.0 40.0 31.0 40.0 32 36.26431595080578 38.0 35.0 40.0 31.0 40.0 33 35.89539940932667 38.0 35.0 40.0 30.0 40.0 34 35.66955738196553 38.0 34.0 40.0 29.0 40.0 35 35.63084160584648 38.0 34.0 40.0 29.0 40.0 36 35.57703975090556 38.0 34.0 40.0 29.0 40.0 37 35.58243513856776 38.0 34.0 40.0 29.0 40.0 38 35.233304909885696 37.0 34.0 40.0 29.0 40.0 39 35.359440062688215 37.0 34.0 40.0 29.0 40.0 40 35.168691549391156 37.0 34.0 40.0 29.0 40.0 41 34.811335565748685 36.0 33.0 40.0 27.0 40.0 42 34.8374501265235 36.0 33.0 40.0 28.0 40.0 43 34.886547601443375 36.0 33.0 40.0 28.0 40.0 44 34.709845891475865 36.0 33.0 39.0 28.0 40.0 45 34.526471811725294 35.0 33.0 39.0 27.0 40.0 46 34.13647815517544 35.0 33.0 39.0 26.0 40.0 47 33.898958098678655 35.0 33.0 39.0 25.0 40.0 48 33.832045064754325 35.0 33.0 39.0 26.0 40.0 49 33.777427820796845 35.0 32.0 38.0 26.0 40.0 50 33.61647693900199 35.0 32.0 38.0 26.0 40.0 51 34.08728255717052 35.0 33.0 39.0 27.0 40.0 52 33.87830940834544 35.0 33.0 38.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 8.0 16 18.0 17 54.0 18 130.0 19 229.0 20 486.0 21 784.0 22 1321.0 23 1963.0 24 2850.0 25 3963.0 26 5337.0 27 7110.0 28 9202.0 29 11854.0 30 15298.0 31 19957.0 32 26945.0 33 41106.0 34 76583.0 35 68973.0 36 87324.0 37 125284.0 38 179423.0 39 37378.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.28356327764273 0.5989654233596515 0.09494444989572695 0.022526849101897367 8 99.4811914630152 0.4035484624388977 0.07186479468089958 0.04339527986500475 9 98.76364912843206 0.7355085332533607 0.2791670870296484 0.2216752512849287 10 68.13224780639624 24.994299186960408 2.2720331241422866 4.601419882501061 11 42.4701588350164 24.2887803853335 17.75972558704554 15.48133519260456 12 34.8978207001013 16.667104304839402 24.97177233785851 23.46330265720078 13 27.31926349641574 16.200535945526486 27.69793568377279 28.78226487428498 14 25.101819975925295 16.972667883761456 30.9115358197631 27.013976320550153 15 27.805732875794142 18.42654796076735 28.727398867576674 25.040320295861836 16 34.10495853263145 18.096660912876374 23.845429882763643 23.95295067172853 17 33.11819962105141 21.479834324007953 21.6879658255261 23.714000229414538 18 33.064162823512504 21.150776485286375 22.17070376364222 23.614356927558905 19 31.258836260211364 23.33988869248916 20.77901437434095 24.62226067295852 20 32.4798467621455 23.55810890556828 20.991291921706072 22.970752410580157 21 33.49866842827548 21.48135454081851 22.70222684122441 22.317750189681597 22 30.67313818356203 20.794216542446524 24.176146139824013 24.356499134167425 23 32.246147977904336 20.405455643528505 23.52894838311122 23.819447995455935 24 31.770596519256312 20.948864052538692 22.673204520295588 24.60733490790941 25 30.143688128903328 20.63943083082613 21.544512639220763 27.67236840104978 26 28.288747216966726 21.332649696440342 23.981005581959725 26.397597504633207 27 25.44663278886538 19.557865670878588 23.407054635210155 31.588446905045874 28 27.495885049496877 23.041096988450498 21.25788266966656 28.205135292386064 29 31.05457440148373 22.756401840291552 20.895932867225646 25.29309089099907 30 29.273018501038585 20.41886119176706 24.324989185730416 25.98313112146394 31 32.16046303040019 20.431437530836217 22.134633164773536 25.27346627399006 32 34.515831676066675 21.010363732602155 21.231209774717687 23.242594816613483 33 34.59059870284046 19.914978419831368 22.558220848806148 22.936202028522032 34 30.04183360259598 22.219627104636523 25.722206636160983 22.016332656606515 35 28.0449597211646 26.37465605094661 24.940953397062664 20.63943083082613 36 29.518049810594803 27.65771903905713 21.071587009609154 21.75264414073891 37 30.456714590349943 26.58527517997294 19.669532505690448 23.288477723986674 38 30.21721134192302 27.031804317692142 20.280659663534557 22.470324676850275 39 30.044321230104167 24.0072638723239 21.213934583688626 24.73448031388331 40 30.155020654218394 22.63741032448337 19.126953305849657 28.08061571544858 41 26.141095468233686 24.958781394204657 20.943059588352927 27.957063549208726 42 23.753111261904333 24.262522094969327 21.873017671829416 30.111348971296927 43 25.90946970691602 19.54363091347064 24.83840786311415 29.70849151649919 44 26.814413313782424 20.427015081932776 23.935122674586534 28.823448929698266 45 28.53239651124062 22.20290471972039 22.134909567830004 27.129789201208986 46 27.952641100305286 24.279106278357226 21.990765373883505 25.777487247453983 47 25.614824048724333 23.138390864326176 23.362139138534594 27.8846459484149 48 28.19794881291797 20.961716794664316 25.51255491783228 25.327779474585434 49 28.934148353812496 20.67660704192067 24.619634843922103 25.769609760344732 50 25.141622016056253 21.65866710154081 24.882908755205015 28.31680212719792 51 24.501057932698618 21.332096890327414 26.070474487306882 28.09637068966709 52 25.84714081768316 22.311531120911134 25.123379414329566 26.71794864707614 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 2.5 8 5.0 9 4.0 10 3.0 11 29.0 12 55.0 13 178.0 14 606.5 15 912.0 16 842.0 17 772.0 18 787.5 19 803.0 20 732.5 21 662.0 22 661.0 23 660.0 24 697.5 25 735.0 26 943.0 27 1151.0 28 1543.5 29 1936.0 30 2361.5 31 2787.0 32 3208.0 33 3629.0 34 4641.5 35 5654.0 36 6417.0 37 7180.0 38 7909.0 39 9392.0 40 10146.0 41 11796.5 42 13447.0 43 13399.0 44 13351.0 45 15658.5 46 17966.0 47 19554.0 48 21142.0 49 20611.5 50 20081.0 51 22973.0 52 25865.0 53 28646.0 54 31427.0 55 36048.0 56 40669.0 57 45877.5 58 51086.0 59 55394.0 60 59702.0 61 69467.0 62 79232.0 63 71661.5 64 69217.0 65 74343.0 66 61685.0 67 49027.0 68 44698.5 69 40370.0 70 33192.5 71 26015.0 72 22494.0 73 18973.0 74 15149.0 75 11325.0 76 10895.5 77 10466.0 78 7997.0 79 5528.0 80 3646.0 81 1764.0 82 1385.0 83 1006.0 84 754.5 85 503.0 86 306.5 87 110.0 88 82.0 89 29.5 90 5.0 91 3.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 723581.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.677476329533253 #Duplication Level Percentage of deduplicated Percentage of total 1 73.89343874266238 8.628888818252552 2 10.153143344063624 2.3712618214132215 3 3.440399545540617 1.2052555277156254 4 1.713690588903617 0.8004632515226354 5 0.9207536451429653 0.5376039448244219 6 0.5550558606324559 0.3888991004462527 7 0.349128952849839 0.28538615580011084 8 0.23196364324938457 0.21669999626855874 9 0.18817458814618443 0.19776638690070636 >10 3.514959288013634 11.848569821485086 >50 3.085353152811967 25.809273598947456 >100 1.8639935618254118 36.459359767600304 >500 0.06390835069115698 4.728427086946727 >1k 0.023669759515243326 4.433643227226806 >5k 0.0011834879757621662 0.6939098732553785 >10k+ 0.0011834879757621662 1.3945916213941494 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCAGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 10091 1.3945916213941494 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5021 0.6939098732553785 No Hit GCAGGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3601 0.4976637031652296 No Hit GCAGGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3351 0.4631133211071048 No Hit GCAGGAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2514 0.347438641976503 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1877 0.259404268492401 No Hit GCAGGAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 1765 0.24392569733036107 No Hit GCAGGAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 1726 0.23853583772929363 No Hit GCAGGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1574 0.21752920543795373 No Hit GCAGGAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1451 0.20053041746535633 No Hit GCAGGAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 1428 0.19735178231600883 No Hit GCAGGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1401 0.19362034105373135 No Hit GCAGGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1393 0.19251472882787138 No Hit GCAGGAGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTCGG 1319 0.18228781573866645 No Hit GCAGGAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACAGCTCT 1227 0.1695732751412765 No Hit GCAGGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1196 0.16528902776606905 No Hit GCAGGAGGGGGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCCATGG 1078 0.14898124743463415 No Hit GCAGGAGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 1066 0.14732282909584415 No Hit GCAGGAGGGGAAAATCCTTTCCTTTATGCCCTGTCCCTTCCCCAGCACTCCT 1047 0.14469700005942665 No Hit GCAGGAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAAAA 1038 0.14345318630533416 No Hit GCAGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1020 0.14096555879714917 No Hit GCAGGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGCAA 1009 0.1394453419865917 No Hit GCAGGAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 971 0.13419368391375672 No Hit GCAGGAGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGC 942 0.13018583959501423 No Hit GCAGGAGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAGAA 882 0.12189374790106428 No Hit GCAGGAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 865 0.1195443219211118 No Hit GCAGGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 855 0.11816230663878682 No Hit GCAGGAGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTC 838 0.11581288065883433 No Hit GCAGGAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 817 0.11291064856595184 No Hit GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 795 0.10987021494483687 No Hit GCAGGAGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTGCG 757 0.10461855687200189 No Hit GCAGGAGGGGGGTGCTGGAGAGATGGCTCAGCGGTTAAGAGCGTTGACTGCT 727 0.10047251102502691 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.023356058271292363 0.0 0.0 0.0 0.0 7 0.023494259799524863 0.0 0.0 0.0 0.0 8 0.029298723985289828 0.0 0.0 0.0 0.0 9 0.03565599428398479 0.0 0.0 0.0 0.0 10 0.05030535627662971 0.0 0.0 0.0 0.0 11 0.07518163135847956 0.0 0.0 0.0 0.0 12 0.08457933527828951 0.0 0.0 0.0 0.0 13 0.09480624836749445 0.0 0.0 0.0 0.0 14 0.10890280424720937 0.0 0.0 0.0 0.0 15 0.12258475554222678 0.0 0.0 0.0 0.0 16 0.1335026762725942 0.0 0.0 0.0 0.0 17 0.14372958936179916 0.0 0.0 0.0 0.0 18 0.1536800993945391 0.0 0.0 0.0 0.0 19 0.16708564763309153 0.0 0.0 0.0 0.0 20 0.17938558364578394 0.0 0.0 0.0 0.0 21 0.19251472882787138 0.0 0.0 0.0 0.0 22 0.2030180449735413 0.0 0.0 0.0 0.0 23 0.21476517487330374 0.0 0.0 1.382015282324992E-4 0.0 24 0.22720331241422867 0.0 0.0 1.382015282324992E-4 0.0 25 0.2388122407857586 0.0 0.0 1.382015282324992E-4 0.0 26 0.253323401250171 0.0 0.0 1.382015282324992E-4 0.0 27 0.26493232962170093 0.0 0.0 1.382015282324992E-4 0.0 28 0.27902888550141586 0.0 0.0 1.382015282324992E-4 0.0 29 0.2895322016470858 0.0 0.0 1.382015282324992E-4 0.0 30 0.30210854071624327 0.0 0.0 1.382015282324992E-4 0.0 31 0.31205905074898316 0.0 0.0 1.382015282324992E-4 0.0 32 0.3256028005157681 0.0 0.0 1.382015282324992E-4 0.0 33 0.33569151207674053 0.0 0.0 1.382015282324992E-4 0.0 34 0.34647123127887547 0.0 0.0 1.382015282324992E-4 0.0 35 0.3611205932715204 0.0 0.0 1.382015282324992E-4 0.0 36 0.3796395980546753 0.0 0.0 1.382015282324992E-4 0.0 37 0.3938743554626227 0.0 0.0 1.382015282324992E-4 0.0 38 0.40244285021303766 0.0 0.0 1.382015282324992E-4 0.0 39 0.41294616635870757 0.0 0.0 1.382015282324992E-4 0.0 40 0.427733729879585 0.0 0.0 1.382015282324992E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTCGC 35 1.0188705E-7 46.000004 45 GCGAGAC 25 3.415892E-5 46.0 30 CTTAACG 20 6.309897E-4 46.0 15 GGAATCG 25 3.415892E-5 46.0 10 AACCGGC 25 3.415892E-5 46.0 26 GATACGA 25 3.415892E-5 46.0 15 CTCACAT 20 6.309897E-4 46.0 43 TACCCGC 25 3.415892E-5 46.0 12 CATATGA 25 3.415892E-5 46.0 19 GATCGTT 20 6.309897E-4 46.0 9 AATCACT 20 6.309897E-4 46.0 40 CTCAAAT 30 1.8604405E-6 46.0 24 ACGTTTC 20 6.309897E-4 46.0 46 AGATACG 30 1.8604405E-6 46.0 38 CATGCGG 25 3.415892E-5 46.0 34 AACCCGT 20 6.309897E-4 46.0 45 TAGACCC 40 5.6061253E-9 46.0 15 GCGAACC 40 5.6061253E-9 46.0 27 TAGCGTA 20 6.309897E-4 46.0 19 TTAGACG 20 6.309897E-4 46.0 43 >>END_MODULE