##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527855_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1336604 Sequences flagged as poor quality 0 Sequence length 50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.577507623798823 31.0 31.0 34.0 3.0 34.0 2 30.152205140789643 33.0 31.0 34.0 16.0 34.0 3 31.414807227870035 31.0 31.0 34.0 28.0 34.0 4 36.10337616825926 37.0 35.0 37.0 35.0 37.0 5 36.22815358924558 37.0 35.0 37.0 35.0 37.0 6 36.51767539226278 37.0 37.0 37.0 35.0 37.0 7 36.65938004076001 37.0 37.0 37.0 35.0 37.0 8 36.68343952285045 37.0 37.0 37.0 35.0 37.0 9 38.56910274097638 39.0 39.0 39.0 38.0 39.0 10 36.237050764474745 35.0 35.0 39.0 33.0 39.0 11 35.77477397942846 35.0 35.0 39.0 33.0 39.0 12 35.584648108190606 35.0 35.0 39.0 33.0 39.0 13 35.68046257530278 35.0 35.0 39.0 33.0 39.0 14 36.31119015056068 36.0 35.0 40.0 33.0 40.0 15 36.42836921032707 36.0 35.0 40.0 33.0 40.0 16 36.51769110372257 36.0 35.0 40.0 33.0 40.0 17 36.34910489569087 36.0 35.0 40.0 33.0 40.0 18 36.271696777804046 36.0 35.0 40.0 33.0 40.0 19 36.24713901798887 36.0 35.0 40.0 33.0 40.0 20 36.11288683858495 35.0 35.0 40.0 32.0 40.0 21 36.11458442440693 35.0 35.0 40.0 32.0 40.0 22 36.158371514674506 35.0 35.0 40.0 32.0 40.0 23 36.11507821314316 35.0 35.0 40.0 33.0 40.0 24 36.04559839713183 35.0 35.0 40.0 33.0 40.0 25 35.98611855119392 35.0 35.0 40.0 33.0 40.0 26 35.91233229887087 35.0 35.0 40.0 32.0 40.0 27 35.79218601769858 35.0 35.0 40.0 32.0 40.0 28 35.64967185493983 35.0 35.0 40.0 31.0 40.0 29 35.63613231742536 35.0 35.0 40.0 32.0 40.0 30 35.78783244700749 35.0 35.0 40.0 32.0 40.0 31 35.82960398143354 35.0 35.0 40.0 32.0 40.0 32 35.846295537047624 35.0 35.0 40.0 33.0 40.0 33 35.74179338083681 35.0 35.0 40.0 32.0 40.0 34 35.33658286223893 35.0 35.0 40.0 31.0 40.0 35 35.33005362844941 35.0 35.0 40.0 31.0 40.0 36 35.36245365119362 35.0 35.0 40.0 31.0 40.0 37 35.27240080083555 35.0 35.0 40.0 31.0 40.0 38 35.18286193966201 35.0 35.0 40.0 31.0 40.0 39 35.054903322150764 35.0 35.0 40.0 31.0 40.0 40 34.90612627225416 35.0 35.0 40.0 30.0 40.0 41 34.82573522150166 35.0 34.0 40.0 30.0 40.0 42 34.76430116923187 35.0 34.0 40.0 30.0 40.0 43 34.68749906479406 35.0 34.0 40.0 30.0 40.0 44 34.37373672381648 35.0 34.0 40.0 28.0 40.0 45 34.43338864764732 35.0 34.0 39.0 29.0 40.0 46 34.25251158907201 35.0 34.0 39.0 28.0 40.0 47 34.24189438307831 35.0 34.0 39.0 28.0 40.0 48 34.18213921251171 35.0 34.0 39.0 28.0 40.0 49 34.13975867197764 35.0 34.0 39.0 28.0 40.0 50 33.64242513115328 35.0 33.0 38.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 2.0 13 5.0 14 15.0 15 44.0 16 104.0 17 204.0 18 378.0 19 774.0 20 1221.0 21 1945.0 22 3191.0 23 4828.0 24 6940.0 25 9181.0 26 12215.0 27 16318.0 28 19819.0 29 22984.0 30 27675.0 31 38650.0 32 57965.0 33 122722.0 34 250630.0 35 168772.0 36 68163.0 37 143160.0 38 230264.0 39 128432.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.3568057554818 1.2690370521111711 0.21853892401938046 0.15561826838764511 8 96.93409566333783 2.128229453151419 0.6316006835233173 0.30607419998743085 9 90.27385822577219 5.323341842460445 2.8269405149169087 1.5758594168504658 10 51.43146361974078 33.49705671986617 7.084521668347543 7.986957992045513 11 35.99039057192706 23.993868041693727 21.302046080963397 18.713695305415815 12 30.783986880182912 19.280504921427738 25.415829969085834 24.51967822930352 13 25.81879150443961 18.425053344146807 27.70042585537676 28.055729296036823 14 25.084243351059847 19.98864285906671 29.783241708090053 25.143872081783385 15 27.173268971213616 21.262094083213874 26.82896355240595 24.735673393166564 16 31.713656400848716 21.89661260926946 22.993272502551243 23.39645848733058 17 30.31705725854479 22.363467414432396 23.237697926985103 24.08177740003771 18 30.423221836834248 22.04040987457766 23.35560869187882 24.180759596709272 19 29.45584481267451 24.289093852779136 21.003229079069044 25.251832255477314 20 30.955241791884507 23.803086029968487 22.162136279705884 23.079535898441126 21 30.487564005494523 23.291416156168918 23.422719070120994 22.79830076821557 22 28.614084650352684 21.556048014221115 25.492217590251116 24.337649745175085 23 29.13570511535204 21.837881676248163 24.343410613764433 24.683002594635358 24 30.703110270506446 22.694081418280955 22.639091309018976 23.96371700219362 25 28.490637466295176 23.14290545292398 21.414495243168506 26.951961837612338 26 27.334947374091357 23.32141756271865 23.168866769813647 26.17476829337635 27 26.804274115594446 21.41172703358661 23.02499468803026 28.75900416278868 28 28.105257802610197 24.16617038404793 21.48946135130525 26.239110462036624 29 30.490332215076414 22.60295495150396 21.609317344553812 25.297395488865813 30 28.052886269979737 21.751992362734214 23.343937321749745 26.851184045536296 31 30.367857645196334 23.054173113352945 22.603628299780638 23.974340941670082 32 33.29228402728108 21.541907700410892 21.288279849529104 23.877528422778923 33 31.574048858150956 22.854562757555716 22.00771507492122 23.56367330937211 34 27.922855236105832 24.71158248815655 25.417999646866235 21.947562628871378 35 27.72309524735823 26.260732423365486 24.32410796316635 21.692064366109932 36 27.928840554120743 27.318487749550354 21.375889941972343 23.376781754356564 37 30.326858216794207 25.74711732121107 20.657576963708024 23.268447498286704 38 30.668170976594418 25.480845486022787 20.856738420654136 22.994245116728663 39 30.680066796149045 23.919500465358475 20.68645612312996 24.713976615362515 40 28.792447127196986 23.119936795041763 22.255806506639214 25.83180957112204 41 26.946425418448545 23.82568060547477 22.609089902469243 26.61880407360744 42 26.538002280406165 22.562030339577017 23.108190608437503 27.79177677157932 43 25.85141148762087 21.106176548925486 24.53194813123408 28.510463832219568 44 26.145290602152922 21.000236420061587 25.00905279349755 27.84542018428794 45 27.820655931001255 21.691241384882883 23.76926898318425 26.718833700931615 46 27.511289806105623 24.022896834066035 22.428857013745283 26.036956346083056 47 25.09636362004004 23.843112844193193 24.469326741503092 26.591196794263674 48 26.95046550810861 22.63310599100407 25.38956938629542 25.026859114591904 49 27.60974828745088 23.16445259777765 23.84977151048478 25.376027604286683 50 25.840114199867724 22.588814637693737 24.1350467303704 27.436024432068134 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 12.0 6 24.0 7 132.5 8 241.0 9 535.5 10 830.0 11 1145.0 12 1460.0 13 1734.0 14 2008.0 15 2431.5 16 2855.0 17 2476.0 18 2097.0 19 2317.5 20 2538.0 21 3086.5 22 3635.0 23 4413.5 24 5192.0 25 6320.5 26 7449.0 27 8314.5 28 9180.0 29 9440.0 30 9700.0 31 11149.5 32 12599.0 33 14783.0 34 16967.0 35 19075.0 36 21183.0 37 21918.5 38 22654.0 39 26404.0 40 30154.0 41 31450.5 42 32747.0 43 35136.0 44 37525.0 45 40941.0 46 44357.0 47 45353.5 48 46350.0 49 51527.0 50 56704.0 51 59879.5 52 63055.0 53 70726.0 54 78397.0 55 83064.0 56 87731.0 57 101093.5 58 114456.0 59 119561.0 60 124666.0 61 123407.0 62 122148.0 63 120665.0 64 119182.0 65 101406.0 66 83630.0 67 71486.0 68 59342.0 69 48628.0 70 37914.0 71 33018.0 72 28122.0 73 21834.5 74 15547.0 75 18426.5 76 21306.0 77 14697.5 78 8089.0 79 5602.5 80 3116.0 81 2016.5 82 917.0 83 669.5 84 422.0 85 248.5 86 75.0 87 45.5 88 16.0 89 14.5 90 13.0 91 9.0 92 5.0 93 5.5 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1336604.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.846538863531034 #Duplication Level Percentage of deduplicated Percentage of total 1 69.47228466184497 6.8406155086114735 2 9.134101791276086 1.7987857654249686 3 3.6822616535951154 1.0877259743344307 4 1.7621938599820828 0.6940604130955738 5 1.0154656529340367 0.4999411008097954 6 0.6431132128312476 0.3799463546275911 7 0.44957922828782904 0.30987595405006796 8 0.3591272244583631 0.2828928138065044 9 0.30736254557557025 0.2723811525183313 >10 7.311622949713259 20.99023603392522 >50 4.041932521979817 27.605968531325985 >100 1.735235456035279 29.42331127360439 >500 0.06409636976009263 4.314858322618753 >1k 0.020078380888703715 3.869039054920916 >5k 7.722454187962968E-4 0.5116694273134477 >10k+ 7.722454187962968E-4 1.118692319012549 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 14712 1.1006999829418436 No Hit AGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 6729 0.5034400615290692 No Hit AGATGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 4318 0.32305753985473634 No Hit AGATGGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4073 0.3047275034340762 No Hit AGATGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 4034 0.3018096609018079 No Hit AGATGGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3798 0.28415297275782503 No Hit AGATGGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 3298 0.24674473516464115 No Hit AGATGGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 2403 0.17978398987284192 No Hit AGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 2376 0.17776394504280998 No Hit AGATGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 2352 0.17596834963833716 No Hit AGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2075 0.15524418601171325 No Hit AGATGGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1932 0.14454543006006268 No Hit AGATGGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 1841 0.1377371308181032 No Hit AGATGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1810 0.13541782008732578 No Hit AGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGT 1478 0.11057875032545167 No Hit AGATGGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 1431 0.10706237599169238 No Hit AGATGGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1408 0.10534159706240592 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.03651043989094751 0.0 0.0 0.0 0.0 8 0.08790935834398221 0.0 0.0 0.0 0.0 9 0.11880856259595213 0.0 0.0 0.0 0.0 10 0.15090483045090394 0.0 0.0 0.0 0.0 11 0.17222752587901877 0.0 0.0 0.0 0.0 12 0.18621820673886955 0.0 0.0 0.0 0.0 13 0.20088223587539766 0.0 0.0 0.0 0.0 14 0.21996043704792145 0.0 0.0 0.0 0.0 15 0.24158239837678175 0.0 0.0 0.0 0.0 16 0.2614087643011692 0.0 0.0 0.0 0.0 17 0.2816840290766749 0.0 0.0 0.0 0.0 18 0.304278604582958 0.0 0.0 0.0 0.0 19 0.33929271497017816 0.0 0.0 0.0 0.0 20 0.3656281142357796 0.0 0.0 0.0 0.0 21 0.391739064075822 0.0 0.0 0.0 0.0 22 0.4159796020362052 0.0 0.0 0.0 0.0 23 0.44171646950031573 0.0 0.0 0.0 0.0 24 0.46835113466666267 0.0 0.0 0.0 0.0 25 0.49326502090372315 0.0 0.0 0.0 0.0 26 0.5163084952611244 0.0 0.0 0.0 0.0 27 0.5346385316817845 0.0 0.0 0.0 0.0 28 0.5555123282587812 0.0 0.0 0.0 0.0 29 0.5689792937923274 0.0 0.0 0.0 0.0 30 0.584541120631092 0.0 0.0 0.0 0.0 31 0.5980080861646382 0.0 0.0 0.0 0.0 32 0.6114750516981844 0.0 0.0 0.0 0.0 33 0.6241190360046805 0.0 0.0 0.0 0.0 34 0.6384837992404632 0.0 0.0 0.0 0.0 35 0.6538959931288549 0.0 0.0 0.0 0.0 36 0.6697570858683649 0.0 0.0 0.0 0.0 37 0.6839722161537748 0.0 0.0 0.0 0.0 38 0.6966910169354573 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTA 20 7.856941E-4 44.000004 26 TCGTTAA 20 7.856941E-4 44.000004 29 TTCGTAA 20 7.856941E-4 44.000004 39 CGATTAT 40 8.314601E-9 44.000004 14 TCGATAA 20 7.856941E-4 44.000004 33 ACGATTT 40 8.314601E-9 44.000004 32 CTATTCG 40 8.314601E-9 44.000004 11 CACGTAC 20 7.856941E-4 44.000004 17 CGCGTAG 20 7.856941E-4 44.000004 41 TATCGCC 40 8.314601E-9 44.000004 28 ACGGTAT 20 7.856941E-4 44.000004 24 AAGCGTA 25 4.44323E-5 44.0 10 TAACGCG 25 4.44323E-5 44.0 35 TACGCTT 25 4.44323E-5 44.0 37 CGGATAA 35 1.4463149E-7 44.0 31 ATACGCC 25 4.44323E-5 44.0 41 GTACGTC 25 4.44323E-5 44.0 18 AGATGGG 134720 0.0 42.946705 1 GATGGGG 131155 0.0 42.923107 2 ATGGGGG 119370 0.0 42.92 3 >>END_MODULE