##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527854_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1673329 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03542041045126 31.0 31.0 34.0 31.0 34.0 2 32.53955856857797 34.0 31.0 34.0 31.0 34.0 3 31.96829135214892 31.0 31.0 34.0 30.0 34.0 4 36.20515511295149 37.0 35.0 37.0 35.0 37.0 5 36.201304704573936 37.0 37.0 37.0 35.0 37.0 6 36.3417923193825 37.0 37.0 37.0 35.0 37.0 7 36.61622490257445 37.0 37.0 37.0 35.0 37.0 8 36.62549265565827 37.0 37.0 37.0 35.0 37.0 9 38.48164825924848 39.0 39.0 39.0 37.0 39.0 10 35.98333382138241 35.0 35.0 39.0 33.0 39.0 11 35.37714639500062 35.0 35.0 39.0 31.0 39.0 12 35.143898779020745 35.0 35.0 39.0 31.0 39.0 13 35.26980528037224 35.0 35.0 39.0 31.0 39.0 14 35.952787527139016 35.0 35.0 40.0 32.0 40.0 15 36.09152354378607 35.0 35.0 40.0 32.0 40.0 16 36.19062778449426 35.0 35.0 40.0 33.0 40.0 17 36.03397777723329 35.0 35.0 40.0 32.0 40.0 18 36.0054382610951 35.0 35.0 40.0 32.0 40.0 19 35.99852509578212 35.0 35.0 40.0 32.0 40.0 20 35.931480898257306 35.0 35.0 40.0 32.0 40.0 21 35.902664688175484 35.0 35.0 40.0 31.0 40.0 22 35.89819276424421 35.0 35.0 40.0 31.0 40.0 23 35.87142396982303 35.0 35.0 40.0 32.0 40.0 24 35.78885323806615 35.0 35.0 40.0 32.0 40.0 25 35.74070072293016 35.0 35.0 40.0 31.0 40.0 26 35.64164548633293 35.0 35.0 40.0 31.0 40.0 27 35.548072734052894 35.0 35.0 40.0 31.0 40.0 28 35.43738679004547 35.0 34.0 40.0 31.0 40.0 29 35.36731031375181 35.0 34.0 40.0 31.0 40.0 30 35.21309616937255 35.0 34.0 40.0 30.0 40.0 31 35.08908648568213 35.0 34.0 40.0 30.0 40.0 32 35.05047662474026 35.0 34.0 40.0 30.0 40.0 33 34.91830895179609 35.0 34.0 40.0 30.0 40.0 34 34.64899371253352 35.0 34.0 40.0 27.0 40.0 35 34.55659466847225 35.0 34.0 40.0 27.0 40.0 36 34.631497452085036 35.0 34.0 40.0 29.0 40.0 37 34.53919462341237 35.0 34.0 40.0 29.0 40.0 38 34.44100413009038 35.0 34.0 39.0 28.0 40.0 39 34.31419105268599 35.0 34.0 39.0 27.0 40.0 40 34.13033240922736 35.0 33.0 39.0 27.0 40.0 41 34.04307700398427 35.0 33.0 39.0 26.0 40.0 42 33.98811530786833 35.0 33.0 39.0 26.0 40.0 43 33.90634537499798 35.0 33.0 39.0 26.0 40.0 44 33.81927702203213 35.0 33.0 39.0 26.0 40.0 45 33.772193633170765 35.0 33.0 38.0 25.0 40.0 46 33.62031555061796 35.0 33.0 38.0 24.0 40.0 47 33.466483877348686 35.0 33.0 38.0 23.0 40.0 48 33.29001409764607 35.0 33.0 38.0 23.0 40.0 49 33.63672714690297 35.0 33.0 38.0 26.0 40.0 50 33.753644979558715 35.0 33.0 38.0 27.0 40.0 51 33.79710983315295 35.0 33.0 37.0 27.0 40.0 52 33.324483111211244 35.0 33.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 1.0 14 20.0 15 48.0 16 143.0 17 376.0 18 744.0 19 1403.0 20 2325.0 21 3860.0 22 5820.0 23 8331.0 24 11471.0 25 15307.0 26 20615.0 27 25325.0 28 29166.0 29 34421.0 30 42110.0 31 55243.0 32 79574.0 33 140330.0 34 352669.0 35 168313.0 36 92054.0 37 149935.0 38 308011.0 39 125712.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.46234661563864 1.2255211019470766 0.18370565501464445 0.1284266273996327 8 97.05628719755649 2.0861408605241407 0.5589456705764377 0.2986262713429338 9 90.51621050014671 5.140292195975806 2.82956908055738 1.5139282233201001 10 51.49650785948251 33.52927009571937 7.023603845986055 7.950618198812069 11 36.09098987706542 23.956914629460197 21.217166498638342 18.734928994836043 12 30.89237083681691 19.19807760458344 25.39614146411136 24.513410094488293 13 25.89054513487784 18.351860273741742 27.817721440314486 27.93987315106593 14 25.255702853413766 19.79443373060528 29.689618718136124 25.260244697844836 15 27.21562824764287 21.049656104687124 26.865189093119163 24.869526554550838 16 31.750480628734696 21.71999648604668 22.952509637973165 23.57701324724546 17 30.40041737159877 22.30200994544408 23.223944603840607 24.073628079116542 18 30.578266437741767 21.80688914134638 23.439801736538364 24.175042684373484 19 29.506630196452697 24.12484335118796 20.994078271517434 25.374448180841902 20 31.015717769787056 23.69157529690814 22.133483612606966 23.15922332069784 21 30.637609220900373 23.26517977038586 23.330797470192653 22.766413538521117 22 28.628978521259118 21.495234947819586 25.49456801382155 24.381218517099747 23 29.26160964161859 21.653900697352405 24.331258228357964 24.75323143267104 24 30.70782852624917 22.51278738371235 22.701931299822093 24.077452790216388 25 28.561149660347724 23.03450188217619 21.368362109304268 27.03598634817182 26 27.314353602907737 23.248566181545886 23.201773231683667 26.235306983862706 27 26.874272781981308 21.307525298372287 23.03438235995432 28.783819559692088 28 28.12142740608691 24.03812997922106 21.53282468659779 26.307617928094235 29 30.400477132709707 22.462109961639342 21.6921478083509 25.44526509730005 30 28.01756259528162 21.650673597361905 23.472969153107368 26.858794654249106 31 30.5167722545895 22.91019877143108 22.524560322566572 24.04846865141284 32 33.26907021870774 21.352107087129905 21.415692909164903 23.96312978499745 33 31.70488290109118 22.7043217442595 21.97392144641012 23.616873908239207 34 27.857522340197292 24.70052213282624 25.415922391830897 22.02603313514557 35 27.856924729087947 26.196940350642343 24.17301080660169 21.773124113668025 36 27.995510745346554 27.25799887529589 21.321091070554566 23.42539930880299 37 30.426234171522754 25.72118214648763 20.512104911825467 23.340478770164147 38 30.572051282204516 25.588871046877216 20.764356561082728 23.074721109835544 39 30.712131326236502 23.987452557148057 20.60443582822027 24.69598028839517 40 28.791349459669917 23.1259961430179 22.17149167916172 25.911162718150464 41 26.927280887380782 23.783248841082656 22.528624078110163 26.760846193426396 42 26.45110435544953 22.48099447269485 23.124860681910135 27.943040489945492 43 25.859170551636883 21.106787726741125 24.453768505775013 28.580273215846972 44 25.93865282918063 20.96371962716238 24.97357064868893 28.124056894968053 45 27.782641668195556 21.52475693662155 23.836675274258678 26.855926120924217 46 27.33240145841015 23.97310989052362 22.477349044927806 26.217139606138424 47 25.17723651475591 23.75671490782745 24.464704789076148 26.601343788340486 48 26.885985959724596 22.547090261389123 25.37289439195759 25.19402938692869 49 27.500330180137915 23.123725220802367 23.883049896344353 25.49289470271536 50 25.694588452121494 22.56967996132261 24.14468404001843 27.591047546537474 51 25.31193805880374 21.998363740782594 25.07731593727235 27.612382263141317 52 25.38508565858836 22.566034533555566 24.886797515611097 27.162082292244982 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 17.0 6 34.0 7 148.0 8 262.0 9 555.5 10 849.0 11 1233.5 12 1618.0 13 1902.5 14 2738.0 15 3289.0 16 2759.0 17 2229.0 18 2469.0 19 2709.0 20 3070.5 21 3432.0 22 4093.0 23 4754.0 24 5795.0 25 6836.0 26 7711.5 27 8587.0 28 9700.5 29 10814.0 30 11948.0 31 13082.0 32 14355.0 33 15628.0 34 18990.0 35 22352.0 36 24886.0 37 27420.0 38 30050.0 39 33678.0 40 34676.0 41 37692.0 42 40708.0 43 44439.5 44 48171.0 45 50455.5 46 52740.0 47 56141.5 48 59543.0 49 62168.0 50 64793.0 51 70354.5 52 75916.0 53 85167.0 54 94418.0 55 101431.5 56 108445.0 57 122542.5 58 136640.0 59 143727.5 60 150815.0 61 147066.0 62 143317.0 63 148103.5 64 127355.0 65 101820.0 66 92029.0 67 82238.0 68 68589.5 69 54941.0 70 46006.5 71 37072.0 72 32022.0 73 26972.0 74 27176.0 75 27380.0 76 20447.0 77 13514.0 78 8754.5 79 3995.0 80 3433.5 81 2872.0 82 1715.5 83 559.0 84 329.0 85 99.0 86 59.5 87 20.0 88 13.0 89 5.0 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1673329.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.57553383183265 #Duplication Level Percentage of deduplicated Percentage of total 1 71.39118703978956 6.836087267941976 2 8.806456734886495 1.6865304880695229 3 3.952842671367043 1.135517361947606 4 1.9731316615072376 0.7557515591769091 5 1.0827828854508985 0.5184112076082228 6 0.650915317124658 0.3739716984471145 7 0.4554004657735943 0.30524917969331794 8 0.3230136224145027 0.24744222956583103 9 0.24560671947417861 0.21166339064853856 >10 4.9189848349080005 13.589843822938485 >50 3.9197239828062203 26.869636142347947 >100 2.176376512580086 35.95354351519698 >500 0.07425137757942378 4.791160974419319 >1k 0.0268303297135733 4.480294151250549 >5k 0.001871883468388835 1.1473333856063623 >10k+ 6.239611561296118E-4 1.0975636251413254 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 18370 1.097811607878666 No Hit AGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 8719 0.521057126243554 No Hit AGATGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5275 0.31523986018290484 No Hit AGATGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5209 0.3112956268611851 No Hit AGATGGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4997 0.2986262713429338 No Hit AGATGGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4724 0.2823114880576384 No Hit AGATGGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 3779 0.2258372382239237 No Hit AGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3188 0.19051842166125132 No Hit AGATGGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 3020 0.18047855502414648 No Hit AGATGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2950 0.17629527725868613 No Hit AGATGGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2455 0.14671352734578794 No Hit AGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2405 0.14372547179903056 No Hit AGATGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2358 0.1409166995850786 No Hit AGATGGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 2277 0.13607604959933162 No Hit AGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGTTC 1942 0.1160560774360571 No Hit AGATGGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 1890 0.11294849966742941 No Hit AGATGGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1752 0.10470146635837901 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.033107655458071907 0.0 0.0 0.0 0.0 8 0.0830679441998555 0.0 0.0 0.0 0.0 9 0.11157399411592102 0.0 0.0 0.0 0.0 10 0.1435461884662251 0.0 0.0 0.0 0.0 11 0.15830718286720663 0.0 0.0 0.0 0.0 12 0.17097653838545798 0.0 0.0 0.0 0.0 13 0.18394469945838504 0.0 0.0 0.0 0.0 14 0.20031924385461555 0.0 0.0 0.0 0.0 15 0.21908423268825197 0.0 0.0 0.0 0.0 16 0.23766993818908297 0.0 0.0 0.0 0.0 17 0.2578094325742278 0.0 0.0 0.0 0.0 18 0.27717203251721567 0.0 0.0 0.0 0.0 19 0.30687330465198415 0.0 0.0 0.0 0.0 20 0.3300008545838864 0.0 0.0 0.0 0.0 21 0.35306864340485344 0.0 0.0 0.0 0.0 22 0.37476192667431213 0.0 0.0 0.0 0.0 23 0.39878589327024155 0.0 0.0 0.0 0.0 24 0.4249612598598363 0.0 0.0 0.0 0.0 25 0.44510075424498113 0.0 0.0 0.0 0.0 26 0.46350717641300665 0.0 0.0 0.0 0.0 27 0.4780291263702476 0.0 0.0 0.0 0.0 28 0.4930291652149697 0.0 0.0 0.0 0.0 29 0.506116848509767 0.0 0.0 0.0 0.0 30 0.5180690706967966 0.0 0.0 0.0 0.0 31 0.5293041595526045 0.0 0.0 0.0 0.0 32 0.5410770984068285 0.0 0.0 0.0 0.0 33 0.5508779206001928 0.0 0.0 0.0 0.0 34 0.5660572427777203 0.0 0.0 0.0 0.0 35 0.5797425371818692 0.0 0.0 0.0 0.0 36 0.5930692649204071 0.0 0.0 0.0 0.0 37 0.6044238759980852 0.0 0.0 0.0 0.0 38 0.6170334704054015 0.0 0.0 0.0 0.0 39 0.6308980481423557 0.0 0.0 0.0 0.0 40 0.6427905092184502 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGT 70 0.0 46.000004 17 ATAACGC 35 1.01994374E-7 46.000004 34 TCGGTAA 35 1.01994374E-7 46.000004 36 TAATACG 25 3.417828E-5 46.0 29 GCGACGT 30 1.8619157E-6 46.0 17 CGTATAA 30 1.8619157E-6 46.0 19 CCGATAC 25 3.417828E-5 46.0 30 TAACGTA 25 3.417828E-5 46.0 11 CGTTAAC 20 6.3122844E-4 46.0 12 CATACCG 20 6.3122844E-4 46.0 11 CAATGCG 25 3.417828E-5 46.0 28 ACGTATT 20 6.3122844E-4 46.0 13 ACCGTAT 20 6.3122844E-4 46.0 44 GACGATA 45 3.110472E-10 46.0 40 TCGCGTA 20 6.3122844E-4 46.0 19 AATAACG 20 6.3122844E-4 46.0 22 CGCTTAT 20 6.3122844E-4 46.0 14 GATGGGG 163920 0.0 44.88732 2 ATGGGGG 150640 0.0 44.880844 3 AGATGGG 168920 0.0 44.86443 1 >>END_MODULE