##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527853_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1690578 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01415787973107 31.0 31.0 34.0 31.0 34.0 2 32.52988800280141 34.0 31.0 34.0 31.0 34.0 3 31.97986901521255 31.0 31.0 34.0 30.0 34.0 4 36.202847783420815 37.0 35.0 37.0 35.0 37.0 5 36.21358257353402 37.0 37.0 37.0 35.0 37.0 6 36.24939695181175 37.0 37.0 37.0 35.0 37.0 7 36.57155659188751 37.0 37.0 37.0 35.0 37.0 8 36.59430857375406 37.0 37.0 37.0 35.0 37.0 9 38.44316381734531 39.0 39.0 39.0 37.0 39.0 10 35.904501300738566 35.0 35.0 39.0 33.0 39.0 11 35.3472930559844 35.0 35.0 39.0 31.0 39.0 12 35.09434288154702 35.0 35.0 39.0 31.0 39.0 13 35.066755866928354 35.0 35.0 39.0 30.0 39.0 14 35.874367228249746 35.0 35.0 40.0 31.0 40.0 15 36.037391353726356 35.0 35.0 40.0 32.0 40.0 16 36.16954970430231 35.0 35.0 40.0 33.0 40.0 17 36.04006558703591 35.0 35.0 40.0 32.0 40.0 18 36.02697243191382 35.0 35.0 40.0 32.0 40.0 19 35.9776183056919 35.0 35.0 40.0 32.0 40.0 20 35.91838176055763 35.0 35.0 40.0 31.0 40.0 21 35.954335144548196 35.0 35.0 40.0 32.0 40.0 22 35.83619862555883 35.0 35.0 40.0 31.0 40.0 23 35.824464768854206 35.0 35.0 40.0 32.0 40.0 24 35.7983121748893 35.0 35.0 40.0 32.0 40.0 25 35.72079194216416 35.0 35.0 40.0 31.0 40.0 26 35.57980051792937 35.0 35.0 40.0 31.0 40.0 27 35.48477562111893 35.0 34.0 40.0 31.0 40.0 28 35.38685112429003 35.0 34.0 40.0 31.0 40.0 29 35.315125359492434 35.0 34.0 40.0 31.0 40.0 30 35.15447142929815 35.0 34.0 40.0 30.0 40.0 31 35.052903208251855 35.0 34.0 40.0 30.0 40.0 32 35.0122478820853 35.0 34.0 40.0 30.0 40.0 33 34.72426057833475 35.0 34.0 40.0 29.0 40.0 34 34.55327941094703 35.0 33.0 40.0 27.0 40.0 35 34.53770781354069 35.0 33.0 40.0 27.0 40.0 36 34.468752107267456 35.0 34.0 40.0 28.0 40.0 37 34.44600249145559 35.0 34.0 40.0 28.0 40.0 38 34.08376957466618 35.0 33.0 39.0 26.0 40.0 39 34.11602718123624 35.0 33.0 39.0 26.0 40.0 40 34.00864438079758 35.0 33.0 39.0 26.0 40.0 41 33.74128848240069 35.0 33.0 39.0 24.0 40.0 42 33.822071504538684 35.0 33.0 39.0 25.0 40.0 43 33.85438826247591 35.0 33.0 39.0 26.0 40.0 44 33.77231988112941 35.0 33.0 39.0 25.0 40.0 45 33.71906590527027 35.0 33.0 38.0 25.0 40.0 46 33.39667675788991 35.0 33.0 38.0 23.0 40.0 47 33.15930113842721 35.0 33.0 38.0 23.0 40.0 48 33.14518052405745 35.0 33.0 38.0 23.0 40.0 49 33.13028266072314 35.0 33.0 37.0 24.0 40.0 50 33.037442815415794 35.0 32.0 37.0 24.0 40.0 51 33.39768942929578 35.0 33.0 37.0 25.0 40.0 52 33.12933564733482 35.0 33.0 37.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 1.0 13 6.0 14 18.0 15 54.0 16 126.0 17 401.0 18 842.0 19 1476.0 20 2571.0 21 4036.0 22 6218.0 23 8785.0 24 11905.0 25 16088.0 26 20899.0 27 26367.0 28 30867.0 29 35690.0 30 44755.0 31 59399.0 32 86864.0 33 155523.0 34 348715.0 35 157513.0 36 98208.0 37 160424.0 38 303608.0 39 109216.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.4485187906148 1.2354946059868284 0.1902899481715721 0.12569665522679227 8 97.0512451954302 2.0813000050870176 0.5785003708790721 0.28895442860370835 9 90.56216276326795 5.104585532285408 2.836189752853758 1.4970619515928871 10 51.557514648836076 33.48062023757555 7.069712252259286 7.892152861329084 11 36.07186417899677 23.912945749915117 21.291534611239467 18.723655459848644 12 30.863231391867156 19.154691472384002 25.465314229807795 24.516762905941043 13 26.090070969810323 18.3023794228956 27.773045668404535 27.834503938889537 14 25.161808564881362 19.847649738728414 29.732316403029024 25.258225293361203 15 27.292381658817284 21.084978037097372 26.834904985158918 24.787735318926426 16 31.6957277333551 21.765455364969853 22.979596327409915 23.559220574265133 17 30.434029071713937 22.293677073758207 23.164621803903753 24.107672050624107 18 30.556294947645124 21.845960375682164 23.396436011825543 24.201308664847172 19 29.53977870290516 24.084188957859386 20.987023373071224 25.389008966164234 20 30.978103346902657 23.675630464846932 22.096762172464093 23.249504015786318 21 30.6406447972232 23.20443067400617 23.341898451298903 22.81302607747173 22 28.834339498088816 21.433734497905448 25.39853233627789 24.333393667727844 23 29.25987443347778 21.687789619881485 24.292165164813454 24.76017078182728 24 30.617634915395797 22.51555385199618 22.772034180026 24.094777052582018 25 28.514093996254537 23.068678286361234 21.378487120972828 27.038740596411404 26 27.395245886318172 23.17012288105015 23.149715659378035 26.28491557325364 27 26.801839370913378 21.32394956044619 23.07098518968069 28.803225878959744 28 28.074658489581672 24.033377933464177 21.585990116989574 26.305973459964584 29 30.442960928155934 22.451256315887232 21.67081317750497 25.434969578451867 30 28.058510166345474 21.659574417743517 23.394779773544904 26.8871356423661 31 30.491287595130185 22.877678521783672 22.5726940726781 24.05833981040804 32 33.30156904916544 21.37127065417863 21.349325496960212 23.977834799695724 33 31.663076178679717 22.726665081410026 22.003303012342524 23.60695572756773 34 27.846925725994303 24.617438532856813 25.51908282256128 22.016552918587607 35 27.815634652763727 26.253565348655904 24.192672565241 21.738127433339365 36 28.162675723924007 27.178751882492257 21.371034048709966 23.287538344873767 37 30.535414515035686 25.76444269356398 20.504111611531677 23.19603117986866 38 30.61272535192106 25.571490933869956 20.708716190557315 23.107067523651676 39 30.716476849929432 23.958492302632592 20.631996867343595 24.69303398009438 40 28.83510846586197 23.096361126194708 22.181112022042164 25.88741838590115 41 27.16437810027103 23.79541198335717 22.545484443781948 26.49472547258985 42 26.45834738178304 22.474029592245966 23.09902293771716 27.968600088253844 43 25.890375954259433 21.097222370100642 24.395739208720332 28.616662466919596 44 25.89262370621172 20.9776183056919 25.015586385248124 28.11417160284826 45 27.85532522013181 21.535888909000352 23.846696218689704 26.76208965217813 46 27.45469301031955 23.934476847563378 22.44185124850791 26.168978893609168 47 25.401371601901836 23.720053141588263 24.438860555384018 26.439714701125887 48 26.946464463633145 22.44380324362437 25.381141834331217 25.228590458411265 49 27.598253378430336 23.01130146021065 23.876271902272478 25.514173259086537 50 25.78928626777351 22.552464305107485 24.16238706525224 27.49586236186677 51 25.373866216169855 21.9762116861807 25.046404247541375 27.603517850108066 52 25.397526763036076 22.5302825424204 24.88752367533471 27.184667019208813 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 17.0 6 34.0 7 146.5 8 259.0 9 559.0 10 859.0 11 1249.0 12 1639.0 13 1982.0 14 2700.5 15 3076.0 16 2678.5 17 2281.0 18 2505.0 19 2729.0 20 3086.5 21 3444.0 22 4106.5 23 4769.0 24 5772.0 25 6775.0 26 7639.5 27 8504.0 28 9757.0 29 11010.0 30 12144.0 31 13278.0 32 14393.0 33 15508.0 34 18880.0 35 22252.0 36 24943.5 37 27635.0 38 30364.5 39 34045.5 40 34997.0 41 38189.0 42 41381.0 43 45131.5 44 48882.0 45 51048.5 46 53215.0 47 56734.5 48 60254.0 49 62997.0 50 65740.0 51 71411.5 52 77083.0 53 85902.5 54 94722.0 55 102343.5 56 109965.0 57 123847.5 58 137730.0 59 144706.0 60 151682.0 61 148750.5 62 145819.0 63 149708.0 64 128706.5 65 103816.0 66 93400.0 67 82984.0 68 69293.5 69 55603.0 70 46483.5 71 37364.0 72 32448.5 73 27533.0 74 27587.0 75 27641.0 76 20568.0 77 13495.0 78 8793.0 79 4091.0 80 3455.0 81 2819.0 82 1690.5 83 562.0 84 325.0 85 88.0 86 55.0 87 22.0 88 17.5 89 9.0 90 5.0 91 3.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1690578.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.127618768135981 #Duplication Level Percentage of deduplicated Percentage of total 1 71.55619432603486 7.246938566327361 2 9.019598544334704 1.8269411099731223 3 3.8098022117946044 1.1575267314917104 4 2.007479149692908 0.8132393405228623 5 1.0926697214238268 0.5533071189032931 6 0.6396378917605953 0.38868052304433215 7 0.44782598459641754 0.3174787592520358 8 0.3073642785203757 0.24902945886380257 9 0.25898503412922036 0.2360611523082087 >10 4.991725840914534 14.481829524114337 >50 3.819401360958304 27.4729194629367 >100 1.95277663567793 34.106498834483325 >500 0.07026574252282915 4.757489265328807 >1k 0.02444025826881014 4.481750182496607 >5k 0.001222012913440507 0.8291974214433288 >10k+ 6.110064567202535E-4 1.081112548510179 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 17471 1.0334335357493118 No Hit AGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 8391 0.49633912188612417 No Hit AGATGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5009 0.2962891981322364 No Hit AGATGGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4967 0.2938048407112833 No Hit AGATGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4889 0.2891910340723705 No Hit AGATGGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4583 0.27109071571971244 No Hit AGATGGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 3567 0.21099292667951433 No Hit AGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 2996 0.1772174960279857 No Hit AGATGGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2895 0.17124320794426523 No Hit AGATGGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 2745 0.16237050286943283 No Hit AGATGGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2312 0.13675796088674996 No Hit AGATGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2302 0.1361664472150945 No Hit AGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2291 0.13551578217627344 No Hit AGATGGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 2224 0.13155264057618163 No Hit AGATGGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 1921 0.11362977632502021 No Hit AGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGTTC 1834 0.10848360738161741 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.031823435535065524 0.0 0.0 0.0 0.0 8 0.07849386422868392 0.0 0.0 0.0 0.0 9 0.10315998433671797 0.0 0.0 0.0 0.0 10 0.13279481928665818 0.0 0.0 0.0 0.0 11 0.1491205966243498 0.0 0.0 0.0 0.0 12 0.16112832415895628 0.0 0.0 0.0 0.0 13 0.17272199212340394 0.0 0.0 0.0 0.0 14 0.18975758586708213 0.0 0.0 0.0 0.0 15 0.206970633712257 0.0 0.0 0.0 0.0 16 0.22489349796341843 0.0 0.0 0.0 0.0 17 0.2404503075279579 0.0 0.0 0.0 0.0 18 0.25955619912243033 0.0 0.0 0.0 0.0 19 0.28883612586937724 0.0 0.0 0.0 0.0 20 0.3093024989086573 0.0 0.0 0.0 0.0 21 0.3322532293688904 0.0 0.0 0.0 0.0 22 0.3541983865873092 0.0 0.0 0.0 0.0 23 0.3776814793520323 0.0 0.0 0.0 0.0 24 0.40287996176455626 0.0 0.0 0.0 0.0 25 0.42376039437399515 0.0 0.0 0.0 0.0 26 0.4416832586251566 0.0 0.0 0.0 0.0 27 0.45806818733001375 0.0 0.0 0.0 0.0 28 0.4743939646677054 0.0 0.0 0.0 0.0 29 0.4869932058739674 0.0 0.0 0.0 0.0 30 0.49982905254889154 0.0 0.0 0.0 0.0 31 0.510535450005856 0.0 0.0 0.0 0.0 32 0.5233121453136146 0.0 0.0 0.0 0.0 33 0.5337227859347513 0.0 0.0 0.0 0.0 34 0.5476233572186554 0.0 0.0 0.0 0.0 35 0.5609915661980696 0.0 0.0 0.0 0.0 36 0.5730584450998416 0.0 0.0 0.0 0.0 37 0.5841197507597993 0.0 0.0 0.0 0.0 38 0.5950627536854259 0.0 0.0 0.0 0.0 39 0.606597270282708 0.0 0.0 0.0 0.0 40 0.6180726355128247 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAAC 20 6.312302E-4 46.0 12 ACGATAG 25 3.4178433E-5 46.0 32 CCCGTAA 40 5.6134013E-9 46.0 19 TATTACG 30 1.8619266E-6 46.0 28 GCGATAT 20 6.312302E-4 46.0 22 TCCCGTA 45 3.110472E-10 46.0 18 CGTAATC 20 6.312302E-4 46.0 27 ACGTACT 20 6.312302E-4 46.0 11 ATACGAG 25 3.4178433E-5 46.0 31 TATACGC 20 6.312302E-4 46.0 28 CGATAAT 20 6.312302E-4 46.0 10 CGCTTAT 25 3.4178433E-5 46.0 14 ATGGGGG 151160 0.0 44.94099 3 GATGGGG 165510 0.0 44.92025 2 AGATGGG 170465 0.0 44.916553 1 TGGGGGG 81240 0.0 44.65805 4 TGGGGGA 51270 0.0 44.268383 4 TGGGGGT 9030 0.0 42.739758 4 ATGGGGT 4920 0.0 42.680897 3 ACGTATT 65 0.0 42.46154 13 >>END_MODULE