##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527849_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 757746 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.901662298448294 33.0 31.0 34.0 3.0 34.0 2 30.36487424545956 34.0 31.0 34.0 16.0 34.0 3 32.385316451686975 34.0 31.0 34.0 28.0 34.0 4 36.28562737381655 37.0 35.0 37.0 35.0 37.0 5 36.23698310515661 37.0 35.0 37.0 35.0 37.0 6 36.445009277515155 37.0 37.0 37.0 35.0 37.0 7 36.68308245771011 37.0 37.0 37.0 35.0 37.0 8 36.72637796834295 37.0 37.0 37.0 35.0 37.0 9 38.68760772079298 39.0 39.0 39.0 39.0 39.0 10 38.25701752302223 39.0 39.0 39.0 37.0 39.0 11 37.2980418240413 39.0 37.0 39.0 35.0 39.0 12 37.290696354715166 39.0 37.0 39.0 35.0 39.0 13 37.29109754455979 39.0 37.0 39.0 34.0 39.0 14 38.14828319779979 40.0 38.0 40.0 35.0 40.0 15 38.22682138869753 40.0 38.0 40.0 35.0 40.0 16 38.298190950529595 40.0 38.0 40.0 35.0 40.0 17 38.21596814763786 40.0 38.0 40.0 35.0 40.0 18 38.13633460288804 40.0 38.0 40.0 34.0 40.0 19 38.18074922203483 40.0 38.0 40.0 34.0 40.0 20 38.07350616169534 40.0 38.0 40.0 34.0 40.0 21 38.04843575551702 40.0 38.0 40.0 34.0 40.0 22 38.0944195020495 40.0 38.0 40.0 34.0 40.0 23 38.057983809878245 40.0 38.0 40.0 34.0 40.0 24 37.98097251585624 40.0 37.0 40.0 34.0 40.0 25 37.98077324063736 40.0 37.0 40.0 34.0 40.0 26 37.87936063007921 40.0 37.0 40.0 34.0 40.0 27 37.829735821766135 40.0 37.0 40.0 34.0 40.0 28 37.70828615393549 40.0 37.0 40.0 34.0 40.0 29 37.69138603173095 40.0 37.0 40.0 34.0 40.0 30 37.87174198214177 40.0 37.0 40.0 34.0 40.0 31 37.92711937773343 40.0 37.0 40.0 34.0 40.0 32 37.89952041977127 40.0 37.0 40.0 34.0 40.0 33 37.88095483183019 40.0 37.0 40.0 34.0 40.0 34 37.58033694668134 40.0 36.0 40.0 34.0 40.0 35 37.59744690173224 40.0 36.0 40.0 34.0 40.0 36 37.657857646229736 40.0 36.0 40.0 34.0 40.0 37 37.588582453750995 40.0 36.0 40.0 34.0 40.0 38 37.53057752861777 40.0 35.0 40.0 34.0 40.0 39 37.438833065433535 40.0 35.0 40.0 34.0 40.0 40 37.36277987610624 40.0 35.0 40.0 34.0 40.0 41 37.26836697257392 40.0 35.0 40.0 33.0 40.0 42 37.20701395982295 40.0 35.0 40.0 33.0 40.0 43 37.149725633655606 40.0 35.0 40.0 33.0 40.0 44 36.83662599340676 40.0 35.0 40.0 33.0 40.0 45 36.86455487722799 39.0 35.0 40.0 33.0 40.0 46 36.69240616248717 39.0 35.0 40.0 33.0 40.0 47 36.664642241595466 39.0 35.0 40.0 33.0 40.0 48 36.64931784529381 39.0 35.0 40.0 33.0 40.0 49 36.56700002375466 39.0 35.0 40.0 33.0 40.0 50 36.145621355968885 38.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 6.0 16 27.0 17 51.0 18 83.0 19 145.0 20 231.0 21 359.0 22 611.0 23 906.0 24 1347.0 25 2119.0 26 2918.0 27 3936.0 28 5258.0 29 6433.0 30 8137.0 31 10633.0 32 14941.0 33 25653.0 34 49781.0 35 53130.0 36 54616.0 37 127654.0 38 229362.0 39 159406.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.16409984348317 0.5982215676493178 0.2053458546795364 0.03233273418797328 8 98.55703626281102 1.1229356538998556 0.26011354728365443 0.059914536005468845 9 94.81026623697123 2.2292430445030393 2.1393712404948357 0.8211194780308968 10 51.73290258213174 28.55653477550525 13.368199898118895 6.342362744244114 11 25.680505076899117 26.232009142905405 34.32337485120344 13.764110928992038 12 26.947156435005926 24.928142147896526 26.227126240191307 21.897575176906244 13 21.934790813808323 24.216030173699366 29.962810757166647 23.886368255325664 14 22.00249160008763 27.18417517215531 28.57316303880192 22.240170188955137 15 23.70121386322066 28.12037278982667 26.65484212387792 21.52357122307475 16 28.43960905105405 27.299253311795773 24.403428061645986 19.85770957550419 17 26.515349470666948 26.15375072913615 25.068822534200113 22.262077265996787 18 25.9239903608861 24.489604696032707 26.32425641309885 23.262148529982344 19 24.87944509109913 27.078730867599432 26.065066658220566 21.976757383080876 20 26.075888226397765 26.39776389449763 25.37868890103016 22.147658978074446 21 25.485848820053157 25.193534508925154 28.115489887112567 21.20512678390912 22 23.24644405909104 25.503532846098825 28.091471284572933 23.158551810237206 23 22.192132983875865 26.410960928860067 29.384120800373744 22.01278528689033 24 23.11236218996867 28.32096771213573 27.62403232745537 20.942637770440225 25 24.45568831772124 29.480327180875914 24.169048731369084 21.894935770033758 26 22.82440290018027 29.18827681043516 25.76588988922409 22.22143040016048 27 22.51229303750861 26.542667331797198 25.635371219379582 25.30966841131461 28 22.402889622643997 28.12908283250588 24.4484299488219 25.01959759602822 29 24.822169961966146 27.146299683535112 25.654902830235986 22.376627524262748 30 24.798547270457384 25.390830172643604 26.951907367376403 22.85871518952261 31 24.566279465678473 25.674962322466893 26.71766000744313 23.041098204411504 32 26.20271172662079 26.049098246642018 25.891525656354503 21.856664370382685 33 27.955673800983444 26.034581508843335 25.571497573065383 20.438247117107842 34 23.77300573015232 27.03610444660876 27.578634529248585 21.612255293990334 35 23.98178281376609 28.714767217510882 26.63016366962016 20.673286299102866 36 24.106890699522005 29.69504292995278 24.288217951661903 21.909848418863312 37 24.856086340277614 28.767291414273384 24.96562172548585 21.411000519963153 38 25.22388768795876 29.692535493423915 24.25522536575581 20.82835145286151 39 23.670464773156176 27.696879957136034 24.63094493405442 24.001710335653375 40 22.889200338899844 28.517999435166928 25.38475953683688 23.208040689096347 41 22.25138766816321 29.084548120346398 25.317982542962948 23.34608166852745 42 22.99490858414297 28.177647918959654 25.55434142839421 23.273102068503164 43 22.082333657980378 27.824231338733558 25.967408603938523 24.126026399347538 44 22.932618581952262 27.413803570061734 25.997761782972127 23.65581606501387 45 24.014115547954063 28.04330210915003 24.75473311637409 23.187849226521816 46 23.610550237150708 29.258353062899705 24.570898427705327 22.56019827224426 47 22.15980024968789 29.785574585679107 25.336590361413986 22.71803480321902 48 22.469666616517937 29.849316261649683 25.190631161365417 22.490385960466963 49 23.834899821312156 29.428726776518783 24.71989294565725 22.016480456511815 50 22.76528018623655 30.034734594441936 24.81504356341043 22.384941655911085 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.0 4 10.0 5 13.0 6 16.0 7 54.0 8 92.0 9 522.0 10 952.0 11 1871.0 12 2790.0 13 3263.5 14 3737.0 15 3832.0 16 3927.0 17 4170.5 18 4414.0 19 5014.0 20 5614.0 21 5488.5 22 5363.0 23 5880.5 24 6398.0 25 7895.5 26 9393.0 27 10468.5 28 11544.0 29 12402.0 30 13260.0 31 15073.0 32 16886.0 33 20019.5 34 23153.0 35 23879.5 36 24606.0 37 26695.0 38 28784.0 39 32073.5 40 35363.0 41 36311.0 42 37259.0 43 38949.0 44 40639.0 45 40230.5 46 39822.0 47 43103.5 48 46385.0 49 48782.5 50 51180.0 51 50345.0 52 49510.0 53 52507.0 54 55504.0 55 54001.5 56 52499.0 57 51996.5 58 51494.0 59 48768.0 60 46042.0 61 42853.5 62 39665.0 63 30534.0 64 21403.0 65 17079.5 66 12756.0 67 9511.0 68 6266.0 69 5287.0 70 4308.0 71 3446.0 72 2584.0 73 2397.0 74 2210.0 75 1643.5 76 1077.0 77 644.5 78 212.0 79 248.0 80 284.0 81 286.0 82 288.0 83 165.5 84 43.0 85 25.5 86 8.0 87 6.0 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 757746.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.0942083494997 #Duplication Level Percentage of deduplicated Percentage of total 1 70.62878205221227 6.423128594542235 2 9.175603314420048 1.6688969654739187 3 3.3318338146304654 0.9090117268847345 4 1.5353136654525403 0.5584984942183793 5 0.872139426216424 0.3965708825912641 6 0.5398267330324622 0.2945578069696178 7 0.33086154605215423 0.21062466842451164 8 0.2887782792297311 0.2100967870500141 9 0.20461174558488482 0.16747036605933915 >10 6.048381245374468 16.180487920754448 >50 4.30410239294162 27.44587236356246 >100 2.7005848122941183 42.16333705489702 >500 0.029022942636153883 1.7863505712996175 >1k 0.010158029922653859 1.5850957972724369 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATACAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 3367 0.44434414698328994 No Hit ATACAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1945 0.2566823183494205 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1876 0.24757636463933827 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1386 0.1829108962633917 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 1324 0.17472873495868008 No Hit ATACAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1059 0.13975659389821918 No Hit ATACAGGGGGCACTCTAGCCACTTGCCCCAATTTAAGTTTAGAAATTACA 1054 0.1390967421800973 No Hit ATACAGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 882 0.11639784307670381 No Hit ATACAGGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 813 0.10729188936662154 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGT 809 0.10676400799212402 No Hit ATACAGGGTTTCAACCAGTTGATTACCCAGGTGATTGGTACCATCCTGTT 795 0.10491642318138268 No Hit ATACAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 762 0.10056140184177811 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.04882902714102087 0.0 0.0 0.0 0.0 6 0.04882902714102087 0.0 0.0 0.0 0.0 7 0.06294985390882961 0.0 0.0 0.0 0.0 8 0.08366919785785738 0.0 0.0 0.0 0.0 9 0.08960786332095451 0.0 0.0 0.0 0.0 10 0.10742385971024591 0.0 0.0 0.0 0.0 11 0.11943316098006455 0.0 0.0 0.0 0.0 12 0.1293309367518931 0.0 0.0 0.0 0.0 13 0.13619339462036092 0.0 0.0 0.0 0.0 14 0.15044619173179402 0.0 0.0 0.0 0.0 15 0.16205958197073952 0.0 0.0 0.0 0.0 16 0.1752566163331776 0.0 0.0 0.0 0.0 17 0.1883216803519913 0.0 0.0 0.0 0.0 18 0.1992752188728149 0.0 0.0 0.0 0.0 19 0.21748712629297945 0.0 0.0 0.0 0.0 20 0.23121204202991505 0.0 0.0 0.0 0.0 21 0.24216558055073864 0.0 0.0 0.0 0.0 22 0.2549667038823036 0.0 0.0 0.0 0.0 23 0.27027526374273175 0.0 0.0 0.0 0.0 24 0.28545185325953554 0.0 0.0 0.0 0.0 25 0.29812100624747606 0.0 0.0 0.0 0.0 26 0.31118607026628975 0.0 0.0 0.0 0.0 27 0.32755039287571297 0.0 0.0 0.0 0.0 28 0.3444425968596337 0.0 0.0 0.0 0.0 29 0.35711174984757427 0.0 0.0 0.0 0.0 30 0.3711006062717586 0.0 0.0 0.0 0.0 31 0.3821861151362066 0.0 0.0 0.0 0.0 32 0.3943273867496496 0.0 0.0 0.0 0.0 33 0.4033013701161075 0.0 0.0 0.0 0.0 34 0.4157065824167993 0.0 0.0 0.0 0.0 35 0.4312790829644762 0.0 0.0 0.0 0.0 36 0.4439482359524168 0.0 0.0 0.0 0.0 37 0.4559575372222354 0.0 0.0 0.0 0.0 38 0.466911075743059 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.854781E-4 44.0 14 AACGTAC 20 7.854781E-4 44.0 29 ACTATCG 30 2.5265708E-6 44.0 27 ACCGGTC 20 7.854781E-4 44.0 17 ACCGGTA 25 4.441399E-5 44.0 11 ACACGTA 25 4.441399E-5 44.0 33 TACCCGA 50 2.7284841E-11 44.0 27 CAAACGT 20 7.854781E-4 44.0 27 AGATACG 20 7.854781E-4 44.0 10 CGACGGC 30 2.5265708E-6 44.0 44 GCGAATA 55 1.8189894E-12 44.0 33 CGACGAA 20 7.854781E-4 44.0 11 ACGCACG 30 2.5265708E-6 44.0 11 CGCATCG 20 7.854781E-4 44.0 30 ACCGATT 20 7.854781E-4 44.0 19 CCGCTTA 50 2.7284841E-11 44.0 20 CGCGAAA 20 7.854781E-4 44.0 26 CGACAAT 20 7.854781E-4 44.0 31 TAACGAG 30 2.5265708E-6 44.0 21 CGTTCGT 40 8.305506E-9 44.0 27 >>END_MODULE