##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527848_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 955680 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24697492884648 33.0 31.0 34.0 31.0 34.0 2 32.664066423907585 34.0 31.0 34.0 31.0 34.0 3 32.978907165578434 34.0 31.0 34.0 31.0 34.0 4 36.4363479407333 37.0 37.0 37.0 35.0 37.0 5 36.18586451531893 37.0 37.0 37.0 35.0 37.0 6 36.25604386405492 37.0 37.0 37.0 35.0 37.0 7 36.6269870668006 37.0 37.0 37.0 35.0 37.0 8 36.66390214297673 37.0 37.0 37.0 35.0 37.0 9 38.61104449188013 39.0 39.0 39.0 38.0 39.0 10 37.99205068642223 39.0 38.0 39.0 35.0 39.0 11 36.93475849656789 39.0 35.0 39.0 34.0 39.0 12 36.96193286455718 39.0 37.0 39.0 33.0 39.0 13 36.98365875606898 39.0 37.0 39.0 33.0 39.0 14 37.852872300351585 40.0 37.0 40.0 33.0 40.0 15 37.95026473296501 40.0 37.0 40.0 34.0 40.0 16 38.01932341369496 40.0 37.0 40.0 34.0 40.0 17 37.926051607232544 40.0 37.0 40.0 34.0 40.0 18 37.89355223505776 40.0 37.0 40.0 34.0 40.0 19 37.952076008705845 40.0 37.0 40.0 34.0 40.0 20 37.913215720743345 40.0 37.0 40.0 34.0 40.0 21 37.87130524861878 40.0 37.0 40.0 34.0 40.0 22 37.893731165243594 40.0 37.0 40.0 34.0 40.0 23 37.87275343211117 40.0 37.0 40.0 34.0 40.0 24 37.804317344717894 40.0 37.0 40.0 34.0 40.0 25 37.79284488531726 40.0 36.0 40.0 34.0 40.0 26 37.685849866063954 40.0 36.0 40.0 34.0 40.0 27 37.6268688263854 40.0 36.0 40.0 34.0 40.0 28 37.5615655868073 40.0 36.0 40.0 34.0 40.0 29 37.49672484513645 40.0 36.0 40.0 33.0 40.0 30 37.386323874100114 40.0 36.0 40.0 33.0 40.0 31 37.30326887661142 40.0 35.0 40.0 33.0 40.0 32 37.21590490540767 40.0 35.0 40.0 33.0 40.0 33 37.169090071990624 39.0 35.0 40.0 33.0 40.0 34 37.02767662816005 39.0 35.0 40.0 32.0 40.0 35 36.949521806462414 39.0 35.0 40.0 32.0 40.0 36 37.01408211953792 39.0 35.0 40.0 33.0 40.0 37 36.92302653607902 39.0 35.0 40.0 33.0 40.0 38 36.85650531558681 39.0 35.0 40.0 32.0 40.0 39 36.768051021262345 39.0 35.0 40.0 32.0 40.0 40 36.675387158881634 39.0 35.0 40.0 32.0 40.0 41 36.575908253808805 39.0 35.0 40.0 32.0 40.0 42 36.527623263016906 39.0 35.0 40.0 31.0 40.0 43 36.42887682069312 38.0 35.0 40.0 31.0 40.0 44 36.3450652938222 38.0 35.0 40.0 31.0 40.0 45 36.247769127741506 38.0 35.0 40.0 31.0 40.0 46 36.120723463920974 38.0 35.0 40.0 31.0 40.0 47 35.97001402142977 38.0 35.0 40.0 31.0 40.0 48 35.86654214799933 38.0 35.0 40.0 30.0 40.0 49 36.122094215637034 38.0 35.0 40.0 31.0 40.0 50 36.14297672861209 38.0 35.0 40.0 31.0 40.0 51 36.12613950276243 38.0 35.0 40.0 31.0 40.0 52 35.69112987610916 37.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 8.0 16 24.0 17 59.0 18 117.0 19 232.0 20 370.0 21 669.0 22 1073.0 23 1625.0 24 2499.0 25 3551.0 26 4826.0 27 6527.0 28 8295.0 29 10156.0 30 13208.0 31 17456.0 32 23231.0 33 33747.0 34 73017.0 35 68069.0 36 73398.0 37 124273.0 38 324433.0 39 164815.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 99.30175372509626 0.5204671019588146 0.15423572744014735 0.023543445504771474 8 98.668905909928 1.078499079189687 0.1993345052737318 0.05326050560857191 9 94.83687008203583 2.258078017746526 2.1057257659467603 0.7993261342708856 10 51.626485853005185 28.626946258161727 13.366189519504438 6.380378369328646 11 25.728381885149844 26.180416038841454 34.342353088900055 13.748848987108655 12 27.034153691612257 24.92277749874435 26.085614431608906 21.957454378034488 13 21.938410346559518 24.174409844299348 29.981688431274065 23.90549137786707 14 22.242696300016743 27.0190858864892 28.569500251130087 22.16871756236397 15 23.880692281935374 27.917085216808974 26.57573664825046 21.62648585300519 16 28.487150510631174 27.220722417545623 24.40042692114515 19.89170015067805 17 26.598652268541773 25.813347564038168 25.171500920810313 22.416499246609746 18 26.054641721078188 24.31263602879625 26.357148836430603 23.27557341369496 19 25.093650594341206 26.821320944249123 25.995730788548464 22.089297672861207 20 26.145467101958815 26.13646827389921 25.458103130755067 22.259961493386907 21 25.63033651431442 25.04499414029801 28.094655114682737 21.23001423070484 22 23.470617780010045 25.294450025113008 27.878892516323457 23.356039678553493 23 22.187238406161057 26.222584965678884 29.32309978235393 22.267076845806127 24 23.17281935375858 28.141951280763433 27.635191695965176 21.050037669512808 25 24.5100870584296 29.03220743345053 24.315461242256823 22.142244265863052 26 23.045580110497237 28.83140800267872 25.77850326469111 22.34450862213293 27 22.717855349070817 26.21473715051063 25.599363803783692 25.468043696634858 28 22.531181985601876 27.907249288464758 24.49010128913444 25.071467436798926 29 24.875376695128075 26.89111418047882 25.627720575924997 22.605788548468105 30 24.982734806629832 25.28084714548803 26.889335342374014 22.84708270550812 31 24.68880796919471 25.310982755734134 26.778942742340533 23.221266532730624 32 26.296354428260504 25.89444165411016 25.85384229030638 21.955361627322954 33 28.177214130252803 25.62259333668174 25.631592164741335 20.568600368324123 34 23.79488950276243 26.73635526536079 27.738364306043866 21.730390925832914 35 24.19376778838105 28.30560438640549 26.680374183827222 20.820253641386238 36 24.16394609074167 29.402519671856687 24.40994893688264 22.023585300519002 37 24.938368491545287 28.495730788548467 25.108613761928677 21.457286957977566 38 25.381194542106144 29.2817679558011 24.352921479993302 20.984116022099446 39 23.79070400133936 27.28266783860707 24.803699983257992 24.12292817679558 40 23.011782186505943 28.117152184831745 25.542440984429938 23.32862464423238 41 22.410430269546293 28.796040515653775 25.348756906077348 23.444772308722587 42 23.053323288129917 27.79832161392935 25.61757073497405 23.530784362966685 43 22.224384731290808 27.36899380545789 26.080591829901223 24.326029633350075 44 22.84059517830236 26.98298593671522 26.217143813828898 23.959275071153524 45 24.210300519002175 27.499790724928847 24.907500418550143 23.382408337518832 46 23.546898543445504 28.74518667336347 24.81154779842625 22.896366984764775 47 22.27921479993303 29.338795412690438 25.496609743847316 22.885380043529217 48 22.569897873765278 29.379604051565376 25.367068474803283 22.683429599866063 49 24.05282102795915 29.017976728612087 24.952389921312573 21.97681232211619 50 22.984890339862716 29.579147831910262 24.96703917629332 22.468922651933703 51 22.50575506445672 29.218776159383896 25.599886991461577 22.67558178469781 52 22.17426335174954 29.722815168257156 25.77243428762766 22.330487192365645 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 5.0 6 10.0 7 61.5 8 113.0 9 579.5 10 1046.0 11 2125.5 12 3205.0 13 3707.0 14 4294.0 15 4379.0 16 4581.0 17 4783.0 18 5445.5 19 6108.0 20 6074.5 21 6041.0 22 5889.5 23 5738.0 24 8050.0 25 10362.0 26 11052.5 27 11743.0 28 12389.5 29 13036.0 30 16920.0 31 20804.0 32 20870.0 33 20936.0 34 24541.0 35 28146.0 36 29462.0 37 30778.0 38 35728.5 39 39214.5 40 37750.0 41 43719.5 42 49689.0 43 48883.5 44 48078.0 45 48851.5 46 49625.0 47 54894.5 48 60164.0 49 58310.5 50 56457.0 51 59493.0 52 62529.0 53 64544.0 54 66559.0 55 67251.0 56 67943.0 57 64879.0 58 61815.0 59 60154.5 60 58494.0 61 54397.0 62 50300.0 63 40097.5 64 24413.0 65 18931.0 66 13958.0 67 8985.0 68 7528.0 69 6071.0 70 5143.0 71 4215.0 72 3352.5 73 2490.0 74 2320.5 75 2151.0 76 1328.5 77 506.0 78 373.5 79 241.0 80 247.5 81 254.0 82 308.5 83 363.0 84 200.0 85 37.0 86 20.5 87 4.0 88 5.0 89 9.0 90 12.0 91 6.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 955680.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.469445839611585 #Duplication Level Percentage of deduplicated Percentage of total 1 68.75070043707274 5.1352963335007535 2 9.203743135716687 1.3749372174786538 3 4.034517538944301 0.9040683073832245 4 2.0999103440546905 0.6274066633182656 5 1.133307183682618 0.42325883140800263 6 0.666816093242183 0.2988448016072326 7 0.4580858455676342 0.23951531893520844 8 0.3165975568754903 0.18918466432278588 9 0.2577608427658859 0.17327975891511802 >10 4.741958982405021 10.31286623137452 >50 4.5052112518211365 24.522225012556504 >100 3.7473383391236132 50.53574418215302 >500 0.07144458141880533 3.4470743345052735 >1k 0.012607867309200941 1.8162983425414363 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATACAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4270 0.4468022769127742 No Hit ATACAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2497 0.26127992633517494 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2326 0.24338690775154861 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 1770 0.18520843797086892 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1748 0.18290641218818013 No Hit ATACAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1380 0.1443997990959317 No Hit ATACAGGGGGCACTCTAGCCACTTGCCCCAATTTAAGTTTAGAAATTACAAG 1314 0.1374937217478654 No Hit ATACAGGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1038 0.10861376192867905 No Hit ATACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGATTGTTC 1015 0.10620709861041353 No Hit ATACAGGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 990 0.10359116022099447 No Hit ATACAGGGGGTGAACTCTTGGAAATGCTGTCAATCAAGCTTACTGCTCTAGC 968 0.10128913443830571 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.047610078687426755 0.0 0.0 0.0 0.0 6 0.047610078687426755 0.0 0.0 0.0 0.0 7 0.059434120207600874 0.0 0.0 0.0 0.0 8 0.07502511300853842 0.0 0.0 0.0 0.0 9 0.07973380210949271 0.0 0.0 0.0 0.0 10 0.09511551983927674 0.0 0.0 0.0 0.0 11 0.10809057425079524 0.0 0.0 0.0 0.0 12 0.11688012723924326 0.0 0.0 0.0 0.0 13 0.1256696802276913 0.0 0.0 0.0 0.0 14 0.1368658965344048 0.0 0.0 0.0 0.0 15 0.14994558848150008 0.0 0.0 0.0 0.0 16 0.1607232546459066 0.0 0.0 0.0 0.0 17 0.1736983090574251 0.0 0.0 0.0 0.0 18 0.1880336514314415 0.0 0.0 0.0 0.0 19 0.20352000669680229 0.0 0.0 0.0 0.0 20 0.21482086053909258 0.0 0.0 0.0 0.0 21 0.22842374016407166 0.0 0.0 0.0 0.0 22 0.2377364808304035 0.0 0.0 0.0 0.0 23 0.24966515988615437 0.0 0.0 0.0 0.0 24 0.2632680395111334 0.0 0.0 0.0 0.0 25 0.27435961828227023 0.0 0.0 0.0 0.0 26 0.2877532228360958 0.0 0.0 0.0 0.0 27 0.30030972710530723 0.0 0.0 0.0 0.0 28 0.31537753222836096 0.0 0.0 0.0 0.0 29 0.3265737485350745 0.0 0.0 0.0 0.0 30 0.3370375020927507 0.0 0.0 0.0 0.0 31 0.3486522685417713 0.0 0.0 0.0 0.0 32 0.3594299347061778 0.0 0.0 0.0 0.0 33 0.36874267537250965 0.0 0.0 0.0 0.0 34 0.3791017913946091 0.0 0.0 0.0 0.0 35 0.39050728277247615 0.0 0.0 0.0 0.0 36 0.40264523689938053 0.0 0.0 0.0 0.0 37 0.41310899045705674 0.0 0.0 0.0 0.0 38 0.42388665662146324 0.0 0.0 0.0 0.0 39 0.43382722250125566 0.0 0.0 0.0 0.0 40 0.4434538757743178 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCC 35 1.0193253E-7 46.000004 31 ATACTAG 35 1.0193253E-7 46.000004 35 AAACGCG 35 1.0193253E-7 46.000004 36 AATTGCG 35 1.0193253E-7 46.000004 44 TCGCTAG 35 1.0193253E-7 46.000004 14 AACGCGT 35 1.0193253E-7 46.000004 37 CATACGG 55 1.8189894E-12 46.000004 38 CCGACGC 35 1.0193253E-7 46.000004 24 CTAGGTC 35 1.0193253E-7 46.000004 30 TCGCATT 25 3.4167213E-5 46.0 30 TCGTTAC 30 1.8610717E-6 46.0 27 CCGGGTC 25 3.4167213E-5 46.0 12 TCGCAAT 20 6.310917E-4 46.0 29 CAAACGA 30 1.8610717E-6 46.0 14 ACCGGGT 40 5.6097633E-9 46.0 18 CAACGAC 20 6.310917E-4 46.0 44 CGACGCT 20 6.310917E-4 46.0 44 GCGCGTA 20 6.310917E-4 46.0 30 CCGATAC 20 6.310917E-4 46.0 44 GCAACCG 30 1.8610717E-6 46.0 23 >>END_MODULE