##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527841_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2220234 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45646089556326 31.0 31.0 33.0 30.0 33.0 2 32.23403298931554 33.0 31.0 34.0 31.0 34.0 3 30.7553073234623 31.0 31.0 31.0 28.0 33.0 4 35.371383376707136 35.0 35.0 37.0 35.0 37.0 5 36.17433297571337 37.0 35.0 37.0 35.0 37.0 6 35.952269445472865 37.0 35.0 37.0 35.0 37.0 7 36.25664727231454 37.0 35.0 37.0 35.0 37.0 8 36.55401187442405 37.0 37.0 37.0 35.0 37.0 9 38.651664644357304 39.0 39.0 39.0 38.0 39.0 10 38.010352512392835 39.0 38.0 39.0 37.0 39.0 11 37.79829918828376 39.0 38.0 39.0 35.0 39.0 12 37.37413128526092 39.0 37.0 39.0 35.0 39.0 13 37.124262577728295 39.0 37.0 39.0 34.0 39.0 14 38.0404331255174 40.0 38.0 40.0 34.0 40.0 15 38.0688850814824 40.0 38.0 40.0 34.0 40.0 16 38.13997533593306 40.0 38.0 40.0 35.0 40.0 17 38.07057229102878 40.0 38.0 40.0 34.0 40.0 18 38.05360335892523 40.0 38.0 40.0 34.0 40.0 19 38.019189418772974 40.0 38.0 40.0 34.0 40.0 20 38.01795891784379 40.0 38.0 40.0 34.0 40.0 21 38.031486771214205 40.0 38.0 40.0 34.0 40.0 22 37.93009430537502 40.0 38.0 40.0 34.0 40.0 23 37.95326798886964 40.0 37.0 40.0 34.0 40.0 24 37.96054695135738 40.0 37.0 40.0 34.0 40.0 25 37.92070655615579 40.0 37.0 40.0 34.0 40.0 26 37.77642987180631 40.0 37.0 40.0 34.0 40.0 27 37.701723782268 40.0 37.0 40.0 34.0 40.0 28 37.62577998535289 40.0 37.0 40.0 34.0 40.0 29 37.56472020516756 40.0 36.0 40.0 34.0 40.0 30 37.4524050167685 40.0 36.0 40.0 33.0 40.0 31 37.393300886302974 40.0 36.0 40.0 33.0 40.0 32 37.30531196261295 39.0 36.0 40.0 33.0 40.0 33 37.0065817386816 39.0 35.0 40.0 32.0 40.0 34 36.89949482802263 39.0 35.0 40.0 31.0 40.0 35 36.817446719580005 39.0 35.0 40.0 31.0 40.0 36 36.78412635785237 39.0 35.0 40.0 31.0 40.0 37 36.81758814611433 39.0 35.0 40.0 32.0 40.0 38 36.49145855797182 39.0 35.0 40.0 31.0 40.0 39 36.59843331828987 39.0 35.0 40.0 31.0 40.0 40 36.47655787633195 39.0 35.0 40.0 31.0 40.0 41 36.21649384704495 38.0 35.0 40.0 31.0 40.0 42 36.26906127912643 38.0 35.0 40.0 31.0 40.0 43 36.25244726456761 38.0 35.0 40.0 31.0 40.0 44 36.181196666657655 38.0 35.0 40.0 31.0 40.0 45 36.05758447082605 38.0 35.0 40.0 30.0 40.0 46 35.740289987451774 38.0 35.0 40.0 30.0 40.0 47 35.521768876613905 38.0 34.0 40.0 29.0 40.0 48 35.59213938710965 38.0 34.0 40.0 29.0 40.0 49 35.54828815341086 38.0 34.0 40.0 29.0 40.0 50 35.390112483639115 37.0 34.0 40.0 29.0 40.0 51 35.74242219513799 38.0 35.0 40.0 30.0 40.0 52 35.50723482299613 37.0 34.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 3.0 15 16.0 16 30.0 17 81.0 18 170.0 19 410.0 20 704.0 21 1263.0 22 2028.0 23 3249.0 24 4995.0 25 7101.0 26 10040.0 27 13529.0 28 18260.0 29 24591.0 30 33065.0 31 43715.0 32 59054.0 33 87415.0 34 170895.0 35 153595.0 36 216433.0 37 364577.0 38 822066.0 39 182947.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.66413450113816 0.29474370719482723 0.030582362039316576 0.010539429627687892 8 99.12175923799023 0.7959070980806529 0.061840328541946474 0.0204933353871709 9 97.81225762689878 1.0719140414929238 0.3941026035994404 0.7217257280088495 10 48.25712064584183 39.61217601387962 4.257118844229932 7.873584496048615 11 33.71991420724122 23.234262694833067 24.929039011203326 18.11678408672239 12 31.035512473009604 18.487465735593638 26.291327851028317 24.185693940368445 13 27.171685507023135 18.34284134014703 28.298098308556668 26.18737484427317 14 25.284542079798793 20.40870466806652 29.749026453968362 24.557726798166318 15 26.969139288921802 19.35998637981402 28.624550385229664 25.046323946034516 16 30.990201933670054 21.763877140877945 25.56865627677083 21.677264648681174 17 29.369561947074047 22.398810215499807 24.328967126888426 23.902660710537717 18 28.5742403728616 22.116993073703043 25.390296698456112 23.91846985497925 19 27.61461179317135 24.908590716113707 24.4369287201259 23.039868770589045 20 28.66517673362357 24.368017064867935 23.72087806960888 23.24592813189961 21 27.732617372763414 24.61952208641071 26.163953889544977 21.4839066512809 22 27.233931198243067 21.99538427030664 27.683388327536644 23.087296203913642 23 27.76139812290056 22.377596235351767 27.008909871662173 22.852095770085494 24 28.276208723945313 22.170591027792565 25.69296749802048 23.860232750241643 25 28.288504725177617 22.896505503473957 24.424047195025388 24.390942576323035 26 25.997935352760116 23.03608538559449 25.13433268745547 25.831646574189925 27 23.845234331156085 21.794729744702586 24.742887461411726 29.617148462729602 28 25.347823697862477 24.828238825276973 24.07435432481441 25.749583152046135 29 28.064789567225795 23.464463655632695 23.749748900341135 24.720997876800375 30 26.789293380787793 22.431734673011945 25.25341923418883 25.525552712011436 31 29.706238171291854 22.802281200990528 24.18015398376928 23.31132664394834 32 30.58632558550135 23.70871718926924 23.3994254659644 22.305531759265016 33 30.619880607179244 22.247294654527405 24.783288608317864 22.34953612997549 34 27.990968519534427 23.62223981796513 26.882932159403016 21.503859503097424 35 25.505374658707147 26.88820187421686 26.762854726123464 20.84356874095253 36 25.423761639538895 27.887465915754827 24.592587988473287 22.096184456232994 37 28.091588544270557 27.30000531475511 22.607346793175854 22.001059347798474 38 27.645374316400883 27.819590187340616 23.386904263244325 21.148131233014176 39 28.477313652524916 24.643033121734014 23.017528783002152 23.862124442738917 40 26.44572599104419 24.364684082848925 23.690205626974453 25.499384299132434 41 24.813015204703646 26.194220969501416 23.457257208024018 25.53550661777092 42 24.158399520050587 24.157363593206842 23.903381355298585 27.780855531443983 43 23.961213097358204 23.819065918277083 24.95885568818422 27.26086529618049 44 24.52854068535118 23.062929402936806 25.72264905410871 26.6858808576033 45 26.348664149814837 23.498243878798363 24.946559686951915 25.206532284434886 46 26.4223951169111 25.221665824413105 23.31965909899587 25.036279959679923 47 23.338440903075984 25.808856183627494 24.96218867020323 25.890514243093293 48 25.613336251944613 23.88730196907173 25.210991273892752 25.288370505090906 49 26.83356799328359 23.998731665220873 25.007769451328105 24.159930890167434 50 24.179568459901073 24.310770846676522 25.292829494548773 26.21683119887363 51 23.667910679685114 23.58382044415138 26.04964161435236 26.698627261811144 52 23.848522272877542 23.752676519682158 26.705788669122267 25.693012538318033 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 3.0 2 6.0 3 11.5 4 17.0 5 44.0 6 71.0 7 735.0 8 1399.0 9 2803.5 10 4208.0 11 5188.0 12 6168.0 13 5800.0 14 5312.5 15 5193.0 16 5328.0 17 5463.0 18 5699.5 19 5936.0 20 7231.0 21 8526.0 22 9567.5 23 10609.0 24 14216.0 25 17823.0 26 19404.5 27 20986.0 28 24554.5 29 28123.0 30 29258.0 31 30393.0 32 35861.0 33 41329.0 34 45745.0 35 50161.0 36 58000.0 37 65839.0 38 66667.5 39 76222.0 40 84948.0 41 88689.5 42 92431.0 43 97539.5 44 102648.0 45 110486.5 46 118325.0 47 123431.5 48 128538.0 49 136770.0 50 145002.0 51 145269.0 52 145536.0 53 159258.5 54 172981.0 55 173127.5 56 173274.0 57 170650.5 58 168027.0 59 162652.0 60 157277.0 61 133432.0 62 109587.0 63 98375.5 64 68307.5 65 49451.0 66 41323.5 67 33196.0 68 30410.5 69 27625.0 70 27395.0 71 27165.0 72 20366.5 73 13568.0 74 9390.5 75 5213.0 76 3670.5 77 2128.0 78 1449.5 79 771.0 80 466.5 81 162.0 82 93.5 83 25.0 84 17.0 85 9.0 86 6.0 87 3.0 88 2.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2220234.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.885349646277836 #Duplication Level Percentage of deduplicated Percentage of total 1 66.39190417390715 5.235233780934308 2 9.903040250236353 1.561778698685528 3 4.296472048611922 1.0163755304629387 4 2.192173856891852 0.6914422938808675 5 1.1842190839032967 0.46689907671861625 6 0.8119356243266447 0.3841437772850689 7 0.49707050119135776 0.2743702290521094 8 0.38334187594063446 0.24182277806815716 9 0.28874025738079306 0.2049136097763427 >10 6.482832680597585 15.013502655680433 >50 4.885981441288502 27.2650940380839 >100 2.556499790538099 35.16626607741985 >500 0.0862549132702639 4.627288186114877 >1k 0.03593954719594329 5.226339877121073 >5k 0.002395969813062886 1.1957889821969454 >10k+ 0.001197984906531443 1.4287404085189952 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AGTTTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 18984 0.855045008769346 No Hit AGTTTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 11265 0.5073789519483081 No Hit AGTTTAGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 7807 0.3516296030058093 No Hit AGTTTAGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 7050 0.31753409775726343 No Hit AGTTTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 5328 0.23997470536889354 No Hit AGTTTAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 5132 0.23114680704826607 No Hit AGTTTAGGGAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAAC 4503 0.20281645988666058 No Hit AGTTTAGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 4168 0.1877279602059963 No Hit AGTTTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4142 0.18655691246958656 No Hit AGTTTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4115 0.18534082443562255 No Hit AGTTTAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3455 0.15561422804983618 No Hit AGTTTAGGGGGGGGCTGGTGAGATGGCTCAGCGGTTAGGAGCGCCGACTGCT 3198 0.1440388715784012 No Hit AGTTTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3070 0.1382737134914608 No Hit AGTTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3046 0.1371927463501595 No Hit AGTTTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 2961 0.13336432105805063 No Hit AGTTTAGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 2836 0.12773428386377292 No Hit AGTTTAGGGGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATA 2707 0.12192408547927831 No Hit AGTTTAGGGGGGGCTGGCAAGATGGCTCAGCGGGTAAGGGCACTGACTGCTC 2641 0.11895142584069968 No Hit AGTTTAGGGGAGCTGGAGAGATGGCTCAGCGGTTAAGAGCACCAACTGCTCT 2268 0.10215139485297495 No Hit AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 2243 0.10102538741411941 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.01941236824586958 0.0 0.0 0.0 0.0 7 0.020583415982279345 0.0 0.0 0.0 0.0 8 0.029276193410244147 0.0 0.0 0.0 0.0 9 0.04832823927567995 0.0 0.0 0.0 0.0 10 0.08228862363156315 0.0 0.0 0.0 0.0 11 0.10566453806220426 0.0 0.0 0.0 0.0 12 0.1185911034602659 0.0 0.0 0.0 0.0 13 0.12674339731758003 0.0 0.0 0.0 0.0 14 0.1397150030131959 0.0 0.0 0.0 0.0 15 0.15394773704033 0.0 0.0 0.0 0.0 16 0.1686759143405605 0.0 0.0 0.0 0.0 17 0.18092687527530882 0.0 0.0 0.0 0.0 18 0.1927274332345149 0.0 0.0 0.0 0.0 19 0.21556286409450534 0.0 0.0 0.0 0.0 20 0.2285344697901212 0.0 0.0 0.0 0.0 21 0.24263208292459262 0.0 0.0 0.0 0.0 22 0.2530363916596179 0.0 0.0 0.0 0.0 23 0.26569271527235416 0.0 0.0 0.0 0.0 24 0.2793399254312834 0.0 0.0 0.0 0.0 25 0.29046487892717615 0.0 0.0 0.0 4.504029755422176E-5 26 0.30330136373012934 0.0 0.0 0.0 4.504029755422176E-5 27 0.3155973649624319 0.0 0.0 0.0 4.504029755422176E-5 28 0.3309110661308673 0.0 0.0 0.0 4.504029755422176E-5 29 0.34226122111453117 0.0 0.0 0.0 4.504029755422176E-5 30 0.3532510537177613 0.0 0.0 0.0 4.504029755422176E-5 31 0.36306983858458164 0.0 0.0 0.0 4.504029755422176E-5 32 0.3758612830899806 0.0 0.0 0.0 4.504029755422176E-5 33 0.38734655896630715 0.0 0.0 0.0 4.504029755422176E-5 34 0.40036320495947725 0.0 0.0 0.0 4.504029755422176E-5 35 0.41504634196215356 0.0 0.0 0.0 4.504029755422176E-5 36 0.42918899539417915 0.0 0.0 0.0 4.504029755422176E-5 37 0.4423407622800119 0.0 0.0 0.0 4.504029755422176E-5 38 0.4563032545218207 0.0 0.0 0.0 4.504029755422176E-5 39 0.4678786109932557 0.0 0.0 0.0 4.504029755422176E-5 40 0.4791386853818111 0.0 0.0 0.0 4.504029755422176E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAACGTA 45 3.110472E-10 46.0 9 ACGCGTA 40 5.6152203E-9 46.0 13 TCACGTA 35 1.0201438E-7 45.999996 36 TAGGGTA 2910 0.0 44.498283 5 AGTTTAG 228840 0.0 44.4532 1 TAGGGAC 15085 0.0 44.444817 5 GTTTAGG 227155 0.0 44.439697 2 TAGGGGA 26460 0.0 44.435375 5 TTAGGGA 87990 0.0 44.42903 4 TTTAGGG 222495 0.0 44.42046 3 TAGGGAT 30235 0.0 44.364475 5 TAGGGAG 26300 0.0 44.312164 5 TTAGGGG 108390 0.0 44.298183 4 TTAGGGT 9210 0.0 44.02714 4 TAGGGGG 41300 0.0 43.956173 5 TAGGGGC 22610 0.0 43.92481 5 TAGGGGT 18615 0.0 43.899544 5 TTAGGGC 17620 0.0 43.532917 4 AGGGATT 10840 0.0 43.43266 6 TAGGGTG 3810 0.0 43.223095 5 >>END_MODULE