##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527836_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3070577 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07354578634569 33.0 31.0 34.0 30.0 34.0 2 32.63333536335353 34.0 31.0 34.0 31.0 34.0 3 32.031837664386856 33.0 31.0 34.0 30.0 34.0 4 36.11641460220669 37.0 35.0 37.0 35.0 37.0 5 35.83331569278347 37.0 35.0 37.0 35.0 37.0 6 36.124459669957794 37.0 35.0 37.0 35.0 37.0 7 36.44080119143731 37.0 36.0 37.0 35.0 37.0 8 36.55544479099531 37.0 37.0 37.0 35.0 37.0 9 38.55576981134165 39.0 39.0 39.0 37.0 39.0 10 37.799143288053024 39.0 38.0 39.0 35.0 39.0 11 37.53279725602061 39.0 37.0 39.0 35.0 39.0 12 37.19174637209879 39.0 37.0 39.0 34.0 39.0 13 37.023466599274336 39.0 37.0 39.0 33.0 39.0 14 37.83816885230365 40.0 38.0 40.0 33.0 40.0 15 37.955919034109876 40.0 38.0 40.0 33.0 40.0 16 37.7913268418281 40.0 37.0 40.0 33.0 40.0 17 37.90162272432836 40.0 38.0 40.0 33.0 40.0 18 37.906853988680304 40.0 38.0 40.0 33.0 40.0 19 37.59059877019857 40.0 37.0 40.0 33.0 40.0 20 37.79199479446371 40.0 37.0 40.0 33.0 40.0 21 37.824714052114636 40.0 37.0 40.0 33.0 40.0 22 37.8640170886449 40.0 38.0 40.0 33.0 40.0 23 37.80962665974506 40.0 37.0 40.0 33.0 40.0 24 37.672631886450006 40.0 37.0 40.0 33.0 40.0 25 37.44139033152401 40.0 37.0 40.0 33.0 40.0 26 37.00536544108811 39.0 35.0 40.0 32.0 40.0 27 36.8126280500375 39.0 35.0 40.0 32.0 40.0 28 36.67060327749475 39.0 35.0 40.0 31.0 40.0 29 36.5289777784436 39.0 35.0 40.0 31.0 40.0 30 36.20931212602713 39.0 35.0 40.0 30.0 40.0 31 36.09495837427298 39.0 35.0 40.0 30.0 40.0 32 35.572322400643266 38.0 35.0 40.0 27.0 40.0 33 35.54597849199027 38.0 35.0 40.0 27.0 40.0 34 35.22608649774945 38.0 35.0 40.0 25.0 40.0 35 35.15243486810459 38.0 35.0 40.0 25.0 40.0 36 34.89856922656556 38.0 34.0 40.0 24.0 40.0 37 34.392973047085285 38.0 34.0 40.0 21.0 40.0 38 34.25322406831029 38.0 33.0 40.0 21.0 40.0 39 33.933702688452364 38.0 33.0 40.0 18.0 40.0 40 33.454269669837295 38.0 33.0 40.0 15.0 40.0 41 33.240522546739584 37.0 33.0 40.0 15.0 40.0 42 33.14743417930897 37.0 33.0 40.0 14.0 40.0 43 32.871795105610445 37.0 32.0 40.0 10.0 40.0 44 32.67486697125654 37.0 32.0 40.0 10.0 40.0 45 32.66263962766607 36.0 32.0 40.0 10.0 40.0 46 32.52760539794312 36.0 31.0 40.0 10.0 40.0 47 32.37632861836717 36.0 31.0 40.0 10.0 40.0 48 32.24874868795018 35.0 31.0 40.0 10.0 40.0 49 32.41565086952713 35.0 31.0 40.0 10.0 40.0 50 32.1990599812348 35.0 31.0 40.0 10.0 40.0 51 32.17097991680391 35.0 31.0 40.0 10.0 40.0 52 31.686843221974243 35.0 31.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 5.0 14 27.0 15 73.0 16 276.0 17 678.0 18 1551.0 19 3087.0 20 5497.0 21 9106.0 22 14689.0 23 22821.0 24 33091.0 25 44679.0 26 58733.0 27 73883.0 28 85905.0 29 88868.0 30 82725.0 31 82915.0 32 93703.0 33 112930.0 34 168419.0 35 198896.0 36 300840.0 37 406722.0 38 800704.0 39 379750.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.3227657212309 0.3217961966106045 0.2352977958214368 0.12014028633706303 8 98.27582894029364 1.191013936468618 0.3506507083196415 0.18250641491810823 9 95.28573945548345 2.5539499579395013 1.0601264843708527 1.1001841022061978 10 47.60730637922449 35.93637287063637 7.19802825332177 9.258292496817374 11 30.082977889823315 34.53611487352377 19.992529091437863 15.388378145215054 12 31.022149908632805 26.905464347580278 22.357361499157978 19.71502424462894 13 21.552789589709036 27.259274071290186 24.008744936212313 27.179191402788465 14 21.801309656133032 34.14260577083721 23.720786028163438 20.335298544866323 15 27.146689368154586 29.333574764612646 22.90377346016726 20.615962407065513 16 25.16041773256297 29.731317599265545 26.55784238597501 18.550422282196475 17 30.937149597616344 30.21249752082426 18.227844473530546 20.62250840802885 18 29.33152303296742 29.615183074712014 19.988067389288723 21.06522650303184 19 24.172753199154425 30.390574800762206 24.939677461271938 20.496994538811435 20 24.201770546708325 35.09682382171169 20.325430692667858 20.375974938912133 21 24.68584894630553 29.78922202569745 26.450240459692104 19.074688568304914 22 24.72222647404706 29.554705841931337 20.182949328416125 25.54011835560548 23 23.907591309385825 35.0992337922156 20.605345509980697 20.387829388417877 24 23.631942791208296 35.71133373304106 20.08720185163896 20.56952162411169 25 23.866328706298525 30.270401947256165 19.350043981961697 26.51322536448361 26 28.35017653033941 30.063339886933306 19.72896299294888 21.857520589778403 27 23.57794642505301 29.443716930075357 20.437233783748134 26.541102861123495 28 24.862916644005345 35.132745409087605 19.122301769341725 20.882036177565325 29 29.83579307732716 30.117727059116252 19.761465027582766 20.285014835973826 30 24.818136786669083 34.04317820396622 19.815005453372443 21.323679555992246 31 30.227055045354668 29.65452421482998 19.767196849321806 20.351223890493543 32 27.67763192390225 30.22223510434684 22.67824581503737 19.421887156713545 33 30.34292903255642 29.936881569815704 20.012851004876282 19.70733839275159 34 25.082191392692643 31.2291794017867 21.116552361331436 22.57207684418922 35 25.346767073419752 35.596990402780975 20.431404260502177 18.624838263297093 36 28.76980450254138 31.618259369493096 19.967973446033106 19.64396268193242 37 26.076662464416295 31.185278858012676 22.973695171949768 19.764363505621258 38 29.489604071156663 30.34732560036762 20.179562342843056 19.983507985632667 39 26.666193357144273 28.47129383174563 20.121397379059374 24.74111543205072 40 25.94235545957649 29.317844821999252 22.84365446624527 21.89614525217899 41 28.011184868511684 28.901213029342692 20.962183980404987 22.125418121740637 42 27.76562841446412 27.690886761673784 22.016318105685023 22.52716671817707 43 25.45772341810676 29.80794814785625 22.376869233372098 22.35745920066489 44 25.126743279846103 27.723063124617948 21.736403288372188 25.41379030716377 45 24.61426630890546 31.03989901572245 21.878591548103174 22.46724312726891 46 24.784429766783248 28.885548221067246 24.222385564667487 22.107636447482022 47 27.33303870901137 28.959801366323006 21.986616847582717 21.720543077082908 48 28.922414256343355 28.265469323843696 21.21852016738222 21.593596252430732 49 27.837048216019333 28.244593768532756 21.98235054844741 21.9360074670005 50 23.659331780313604 30.521364551353052 22.62506362810638 23.19424004022697 51 22.91233862560685 31.444513523028405 22.95080045216257 22.69234739920217 52 25.78906179522611 28.8890654753162 22.68635504011135 22.635517689346337 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 245.5 6 491.0 7 525.5 8 560.0 9 1081.0 10 1602.0 11 15535.0 12 29468.0 13 29005.0 14 27702.0 15 26862.0 16 21759.0 17 16656.0 18 17090.0 19 17524.0 20 17011.5 21 16499.0 22 18072.0 23 19645.0 24 23497.5 25 27350.0 26 32040.5 27 36731.0 28 40950.5 29 45170.0 30 48525.5 31 51881.0 32 55376.5 33 58872.0 34 63028.0 35 67184.0 36 70306.5 37 73429.0 38 79985.0 39 89292.5 40 92044.0 41 96488.0 42 100932.0 43 100498.0 44 100064.0 45 108883.0 46 117702.0 47 120005.0 48 122308.0 49 123097.5 50 123887.0 51 132763.5 52 141640.0 53 153888.5 54 166137.0 55 190589.0 56 215041.0 57 220367.0 58 225693.0 59 230811.0 60 235929.0 61 216290.5 62 196652.0 63 187283.5 64 158907.0 65 139899.0 66 121124.5 67 102350.0 68 84333.5 69 66317.0 70 55858.5 71 45400.0 72 41602.5 73 37805.0 74 34449.0 75 31093.0 76 23679.0 77 16265.0 78 11003.0 79 5741.0 80 4345.5 81 2950.0 82 2154.5 83 1359.0 84 864.0 85 369.0 86 206.0 87 43.0 88 33.0 89 15.5 90 8.0 91 5.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3070577.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.482111498202617 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7551933923876 14.555622653406175 2 8.585328108484019 3.1734998269930923 3 3.482068688618123 1.9306794524232098 4 1.7687548531874937 1.3076129763839304 5 0.9822491761775213 0.9077019396565307 6 0.604779442094177 0.6706560648363211 7 0.42754900417886654 0.5531405856325515 8 0.31443184658027784 0.46490915576659475 9 0.226752870328277 0.37717846487502255 >10 2.4060991020778686 11.209413869711325 >50 1.3825188806319915 18.389201377097955 >100 1.0118465160597365 33.41830540875777 >500 0.036011233385881296 4.519862190979722 >1k 0.014475103615893464 4.576304596910231 >5k 0.0010591539231141558 1.1032695947665265 >10k+ 8.826282692617964E-4 2.842641841803072 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGACATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGGACATGGGAAG 30489 0.9929404147819775 No Hit GGACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 20728 0.675052278447992 No Hit GGACATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 14633 0.4765553835647176 No Hit GGACATGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10837 0.3529304101476693 No Hit GGACATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 10442 0.3400663784037984 No Hit GGACATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6358 0.20706206032286442 No Hit GGACATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 6017 0.19595665570347204 No Hit GGACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5863 0.19094131168181094 No Hit GGACATGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5248 0.17091250276413847 No Hit GGACATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5206 0.1695446816673218 No Hit GGACATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5124 0.16687417381163214 No Hit GGACATGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 4915 0.16006763549652067 Illumina Single End Adapter 2 (100% over 34bp) GGACATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3574 0.11639506190530315 No Hit GGACATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGGGCATGGGAAG 3384 0.11020729980065636 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.028040332484741467 0.0 0.0 0.0 0.0 8 0.10203294038872825 0.0 0.0 0.0 0.0 9 0.18644704236369908 0.0 0.0 0.0 0.0 10 0.4295283915694021 0.0 0.0 0.0 0.0 11 0.6162034041159039 0.0 0.0 0.0 0.0 12 0.7064144621678596 0.0 0.0 0.0 0.0 13 0.779364920664748 0.0 0.0 0.0 0.0 14 0.8743959197245339 0.0 0.0 0.0 0.0 15 0.9579632753062373 0.0 0.0 0.0 0.0 16 1.0519846921278966 0.0 0.0 0.0 0.0 17 1.1412513022796693 0.0 0.0 3.256716897182517E-5 0.0 18 1.21674199995636 0.0 0.0 3.256716897182517E-5 0.0 19 1.3031101320696403 0.0 0.0 3.256716897182517E-5 0.0 20 1.3927675482490751 0.0 0.0 3.256716897182517E-5 0.0 21 1.4780283966173133 0.0 0.0 3.256716897182517E-5 0.0 22 1.5704865893283249 0.0 0.0 3.256716897182517E-5 0.0 23 1.6735942462931235 0.0 0.0 3.256716897182517E-5 0.0 24 1.790119576874314 0.0 0.0 3.256716897182517E-5 0.0 25 1.8874302777621275 0.0 0.0 3.256716897182517E-5 0.0 26 2.0280553133824686 0.0 0.0 3.256716897182517E-5 0.0 27 2.135624672496407 0.0 0.0 3.256716897182517E-5 0.0 28 2.3128552060410796 0.0 0.0 3.256716897182517E-5 0.0 29 2.3821255744441516 0.0 0.0 3.256716897182517E-5 0.0 30 2.4822370518635424 0.0 0.0 3.256716897182517E-5 0.0 31 2.5336931788390262 0.0 0.0 3.256716897182517E-5 0.0 32 2.5978830688824934 0.0 0.0 3.256716897182517E-5 0.0 33 2.6455288370882735 0.0 0.0 3.256716897182517E-5 0.0 34 2.700176546622996 0.0 0.0 3.256716897182517E-5 0.0 35 2.819470086566792 0.0 0.0 3.256716897182517E-5 0.0 36 2.8647710186066004 0.0 0.0 3.256716897182517E-5 0.0 37 2.9136217720643383 0.0 0.0 3.256716897182517E-5 0.0 38 2.9573269128245276 0.0 0.0 3.256716897182517E-5 0.0 39 2.9944860526213803 0.0 0.0 3.256716897182517E-5 0.0 40 3.031189252052627 0.0 0.0 3.256716897182517E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATGCG 20 6.31311E-4 46.000004 20 ACGTACA 20 6.31311E-4 46.000004 26 ATAGTCG 40 5.6170393E-9 46.000004 17 ATACGTC 35 1.0203257E-7 46.000004 20 TCGTTAG 65 0.0 46.0 14 ATGGGAT 24250 0.0 43.145153 5 CGAACGT 80 0.0 43.125004 38 ATGGGAG 28005 0.0 42.476704 5 TGGGATT 8835 0.0 42.459534 6 ATGGGAC 13695 0.0 42.439575 5 ATGGGGC 28120 0.0 42.28663 5 ATGGGGT 27310 0.0 42.01648 5 GGACATG 336850 0.0 41.63761 1 ACATGGG 319295 0.0 41.564884 3 CATGGGG 154105 0.0 41.54492 4 GACATGG 332825 0.0 41.52543 2 ATGGGCT 8875 0.0 41.490704 5 ATGGGGG 54620 0.0 41.0985 5 CATGGGA 116495 0.0 40.922012 4 TGGGGTT 6070 0.0 40.695225 6 >>END_MODULE