##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527834_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3702889 Sequences flagged as poor quality 0 Sequence length 50 %GC 61 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.69384418490535 34.0 31.0 34.0 31.0 34.0 2 33.00337115155221 34.0 31.0 34.0 31.0 34.0 3 33.16734177016919 34.0 34.0 34.0 31.0 34.0 4 36.51642379774279 37.0 37.0 37.0 35.0 37.0 5 36.483271305189 37.0 37.0 37.0 35.0 37.0 6 36.52220171871207 37.0 37.0 37.0 35.0 37.0 7 36.525115389632255 37.0 37.0 37.0 35.0 37.0 8 36.6750353575276 37.0 37.0 37.0 35.0 37.0 9 38.705526414645426 39.0 39.0 39.0 39.0 39.0 10 38.27042452528283 39.0 39.0 39.0 37.0 39.0 11 38.10019392965871 39.0 39.0 39.0 37.0 39.0 12 37.627295606214496 39.0 37.0 39.0 35.0 39.0 13 37.53175912105386 39.0 37.0 39.0 35.0 39.0 14 38.330848966847235 40.0 38.0 40.0 35.0 40.0 15 38.36661887515397 40.0 38.0 40.0 35.0 40.0 16 38.34010768348713 40.0 38.0 40.0 35.0 40.0 17 38.26612463943694 40.0 38.0 40.0 35.0 40.0 18 38.18870238886448 40.0 38.0 40.0 34.0 40.0 19 38.14096965909591 40.0 38.0 40.0 34.0 40.0 20 38.03556655357479 40.0 38.0 40.0 34.0 40.0 21 38.04500377948137 40.0 38.0 40.0 34.0 40.0 22 38.04688420311816 40.0 38.0 40.0 34.0 40.0 23 37.96103393863548 40.0 37.0 40.0 34.0 40.0 24 37.90890626211048 40.0 37.0 40.0 34.0 40.0 25 37.85776808324527 40.0 37.0 40.0 34.0 40.0 26 37.74051153032133 40.0 37.0 40.0 34.0 40.0 27 37.60431085025773 40.0 36.0 40.0 34.0 40.0 28 37.44228303900009 40.0 36.0 40.0 33.0 40.0 29 37.44171429389323 40.0 36.0 40.0 33.0 40.0 30 37.536499203729846 40.0 36.0 40.0 33.0 40.0 31 37.5334305187112 40.0 36.0 40.0 34.0 40.0 32 37.43887407913119 40.0 35.0 40.0 33.0 40.0 33 37.276894338447626 40.0 35.0 40.0 33.0 40.0 34 36.92973243324334 39.0 35.0 40.0 33.0 40.0 35 36.89780303973465 39.0 35.0 40.0 33.0 40.0 36 36.80387394815237 39.0 35.0 40.0 33.0 40.0 37 36.69577781024492 39.0 35.0 40.0 33.0 40.0 38 36.60112738999198 39.0 35.0 40.0 33.0 40.0 39 36.41975063254664 38.0 35.0 40.0 32.0 40.0 40 36.20151076632327 38.0 35.0 40.0 32.0 40.0 41 36.064949016835236 37.0 35.0 40.0 31.0 40.0 42 35.92615225571169 37.0 35.0 40.0 31.0 40.0 43 35.76169120921529 37.0 35.0 40.0 31.0 40.0 44 35.451205261621396 36.0 35.0 40.0 30.0 40.0 45 35.36858544774094 36.0 35.0 40.0 30.0 40.0 46 35.19633399758945 36.0 35.0 40.0 30.0 40.0 47 35.08552403272148 35.0 35.0 39.0 30.0 40.0 48 34.9493238927767 35.0 34.0 39.0 30.0 40.0 49 34.868177793069144 35.0 34.0 39.0 30.0 40.0 50 34.404993506421604 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 4.0 14 6.0 15 47.0 16 132.0 17 262.0 18 469.0 19 852.0 20 1472.0 21 2518.0 22 3800.0 23 5831.0 24 8811.0 25 12148.0 26 16520.0 27 22551.0 28 28958.0 29 38034.0 30 49639.0 31 64334.0 32 80273.0 33 107949.0 34 224887.0 35 320957.0 36 403521.0 37 677391.0 38 1039444.0 39 592077.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 99.29290345997408 0.31453818896542673 0.10670047090258444 0.2858578801578983 8 99.15355280701095 0.6113334750245012 0.12425433222545963 0.11085938573908102 9 94.56564860572381 2.8627917282964734 1.3344445377649723 1.2371151282147532 10 50.75990665666726 33.834446563210506 6.691018823410586 8.714627956711638 11 37.771264545061975 21.29696569354361 22.385224077740382 18.546545683654035 12 30.43553290417293 16.353474273735994 26.195357192721687 27.015635629369395 13 26.20191963626239 16.449399374380384 28.93694626006883 28.4117347292884 14 26.033753644789243 18.37195227834267 28.172948203416304 27.421345873451784 15 28.66983050261566 18.675012942596982 26.501847611419084 26.153308943368277 16 32.02804620932467 18.658647342655964 23.947490729535776 25.365815718483596 17 31.517633933936445 19.653735232139013 22.789503006976446 26.039127826948093 18 31.71858513717262 19.89530336988227 22.294619147373847 26.091492345571254 19 30.90543626881605 21.073680577516637 21.523221463025223 26.497661690642087 20 30.623953351018624 22.307365951288304 21.92185615069747 25.146824546995607 21 30.91999247074379 20.191639554952904 24.678973633830235 24.20939434047307 22 29.392617494070173 19.093253943069858 25.13026990547111 26.383858657388863 23 28.752333650833172 21.451817756351865 24.13739650310879 25.658452089706174 24 28.849879107907366 20.99101539365614 22.978922673620517 27.180182824815972 25 27.91334009742123 21.652336864540093 22.179897912143733 28.254425125894944 26 27.275918883876887 20.621223050434402 23.05580858621471 29.047049479474 27 26.81517053306216 19.65889336677389 22.47150805762744 31.054428042536518 28 28.454107049927774 22.4238695785912 21.826714222327485 27.29530914915354 29 29.799299952010443 20.803054047798895 22.443475891391827 26.95417010879883 30 29.76173468877949 20.368285411742022 23.183060577835306 26.68691932164318 31 32.60986219138624 20.598430036655163 21.80519048775159 24.986517284207007 32 33.53735421180597 20.388242801769106 21.857960095482206 24.216442890942723 33 32.90965513684045 20.767325188521717 22.777188298109934 23.545831376527897 34 29.30533429438474 22.96401539446632 25.297652724669845 22.432997586479097 35 28.24445993385165 25.12238417084606 24.431437183237197 22.201718712065095 36 29.006162485561948 25.339565944320775 21.28257152725885 24.37170004285843 37 30.263667098851734 25.30281085930472 20.886070308885845 23.5474517329577 38 31.405154191767565 24.530846050205664 20.77302344196653 23.290976316060245 39 30.21281491289639 22.42449071522263 20.50345014392816 26.85924422795282 40 28.356318539389108 23.2070688589369 21.514066449196832 26.92254615247716 41 26.62467062879822 22.793202820824497 21.697760856455595 28.884365693921694 42 26.062325929834785 21.10330609424155 23.424979792805022 29.40938818311864 43 26.360525524799687 20.564942670439216 23.656771780088466 29.417760024672628 44 26.925219740586336 20.44933023917271 23.560954703206065 29.06449531703489 45 28.152234647055312 21.249921345198302 22.87160106608651 27.72624294165988 46 27.045936294606726 22.636352318419483 23.083300633640384 27.23441075333341 47 26.767721095609403 22.216977068445747 24.559742406537165 26.45555942940769 48 27.730644909960844 21.501238627460882 25.00004726039587 25.768069202182403 49 28.172138025201406 20.723548558976518 24.611701836052877 26.492611579769203 50 25.708899186554067 21.567727252963834 24.467571131621824 28.255802428860278 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 81.5 10 163.0 11 111.5 12 60.0 13 111.0 14 162.0 15 1089.5 16 2017.0 17 3494.0 18 4971.0 19 6094.0 20 7217.0 21 6296.5 22 5376.0 23 5347.5 24 5319.0 25 6060.5 26 6802.0 27 7051.5 28 7301.0 29 8610.5 30 9920.0 31 12316.5 32 14713.0 33 15904.0 34 17095.0 35 20735.0 36 24375.0 37 26495.0 38 28615.0 39 34149.5 40 39684.0 41 43963.0 42 48242.0 43 53995.5 44 59749.0 45 65012.5 46 70276.0 47 74938.0 48 79600.0 49 93714.5 50 107829.0 51 116695.5 52 125562.0 53 140976.5 54 156391.0 55 168389.0 56 180387.0 57 192524.0 58 204661.0 59 225941.0 60 247221.0 61 291413.5 62 335606.0 63 354559.0 64 373512.0 65 383481.0 66 393450.0 67 377066.0 68 360682.0 69 311501.0 70 262320.0 71 221177.5 72 180035.0 73 149492.5 74 118950.0 75 100800.0 76 82650.0 77 68596.0 78 54542.0 79 54268.0 80 53994.0 81 38585.5 82 23177.0 83 14745.0 84 6313.0 85 4507.0 86 2701.0 87 1764.5 88 828.0 89 514.0 90 200.0 91 137.0 92 74.0 93 54.0 94 34.0 95 43.0 96 52.0 97 56.5 98 61.0 99 30.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3702889.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.499412443111458 #Duplication Level Percentage of deduplicated Percentage of total 1 62.71947482935948 4.703592099607143 2 10.138508093808628 1.520657075065893 3 3.999007866961378 0.899706280727723 4 1.9063119845611007 0.5718487926988006 5 1.0984389109029746 0.41188232182117823 6 0.7016707429151274 0.315727098023098 7 0.5391804268713367 0.28304754816527355 8 0.43796898491011904 0.26276080441054733 9 0.37299928541260124 0.25175479340654494 >10 11.13369568421768 24.3751998815133 >50 4.800437931512678 24.55710353612322 >100 2.0277251108748153 26.42423708802083 >500 0.07474808861520801 3.852824706065335 >1k 0.04396946389129883 6.285601946810229 >5k 0.002931297592753255 1.5242744097834706 >10k+ 0.002931297592753255 3.7597816177574477 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGCACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 31934 0.8624077038226099 No Hit CGCACCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 20424 0.5515693287052352 No Hit CGCACCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 15864 0.42842224004014157 No Hit CGCACCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 15179 0.40992317079988083 No Hit CGCACCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 14104 0.38089178476589497 No Hit CGCACCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 13767 0.3717907828184966 No Hit CGCACCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 12894 0.3482145967648504 No Hit CGCACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 12659 0.3418682007481186 No Hit CGCACCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 9749 0.26328091390263114 No Hit CGCACCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 9185 0.24804956346247484 No Hit CGCACCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 7630 0.20605532599005805 No Hit CGCACCGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 6161 0.1663835994003601 No Hit CGCACCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 6009 0.16227869644485698 No Hit CGCACCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 5981 0.1615225301109485 No Hit CGCACCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 5494 0.14837063708904047 No Hit CGCACCGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 5262 0.14210525889379888 No Hit CGCACCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 4602 0.12428133816595636 No Hit CGCACCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 4598 0.12417331440396943 No Hit CGCACCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 4568 0.1233631361890675 No Hit CGCACCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 4551 0.12290403520062308 No Hit CGCACCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 4520 0.12206685104522441 No Hit CGCACCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 4504 0.12163475599727672 No Hit CGCACCGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 4420 0.11936625699555131 No Hit CGCACCGGGGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAA 4404 0.11893416194760362 No Hit CGCACCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 4159 0.1123177065259045 No Hit CGCACCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 4153 0.11215567088292411 No Hit CGCACCGGGGTCTCTCGGGTGGAGTCTTCTGACTGCTGGTGGAGCAGGTC 4100 0.11072435603659736 No Hit CGCACCGGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACCCGATTG 3823 0.10324371051900286 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.00429394453898024 0.0 0.0 0.0 0.0 8 0.0066704673026925735 0.0 0.0 0.0 0.0 9 0.007291603934117387 0.0 0.0 0.0 0.0 10 0.01571745736909748 0.0 0.0 5.401188099346213E-5 0.0 11 0.022414930612286783 0.0 0.0 5.401188099346213E-5 0.0 12 0.029193421676966282 0.0 0.0 5.401188099346213E-5 0.0 13 0.03867250679131889 0.0 0.0 5.401188099346213E-5 0.0 14 0.04933985328752766 0.0 0.0 5.401188099346213E-5 0.0 15 0.060871389879631824 0.0 0.0 5.401188099346213E-5 0.0 16 0.0754545977478666 0.0 0.0 5.401188099346213E-5 0.0 17 0.08774230067387924 0.0 0.0 5.401188099346213E-5 0.0 18 0.10086718775529054 0.0 0.0 5.401188099346213E-5 0.0 19 0.12336313618906751 0.0 0.0 5.401188099346213E-5 0.0 20 0.13600191634153766 0.0 0.0 5.401188099346213E-5 0.0 21 0.148316625208047 0.0 0.0 5.401188099346213E-5 0.0 22 0.16003720338362828 0.0 0.0 5.401188099346213E-5 0.0 23 0.1730000548220592 0.0 0.0 5.401188099346213E-5 0.0 24 0.18771829239277765 0.0 0.0 5.401188099346213E-5 0.0 25 0.20257155966597973 0.0 0.0 5.401188099346213E-5 0.0 26 0.220719551679783 0.0 0.0 5.401188099346213E-5 0.0 27 0.2364370090488805 0.0 0.0 5.401188099346213E-5 0.0 28 0.2616335515323306 0.0 0.0 5.401188099346213E-5 0.0 29 0.2749204742567222 0.0 0.0 5.401188099346213E-5 0.0 30 0.2934465494374798 0.0 0.0 5.401188099346213E-5 0.0 31 0.3080297573057145 0.0 0.0 5.401188099346213E-5 0.0 32 0.3236932027938186 0.0 0.0 5.401188099346213E-5 0.0 33 0.3358188700768508 0.0 0.0 5.401188099346213E-5 0.0 34 0.35437195119810505 0.0 0.0 5.401188099346213E-5 0.0 35 0.3905869174042214 0.0 0.0 5.401188099346213E-5 0.0 36 0.40749263615517506 0.0 0.0 5.401188099346213E-5 0.0 37 0.42539757470450773 0.0 0.0 5.401188099346213E-5 0.0 38 0.4395216815842981 0.0 0.0 5.401188099346213E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCACCG 377945 0.0 42.784 1 GCACCGG 375360 0.0 42.725807 2 CACCGGG 355665 0.0 42.69917 3 ACCGGAT 3230 0.0 42.63777 4 ACCGGGG 184215 0.0 42.60272 4 ACCGGGA 122350 0.0 42.523743 4 ACCGGGT 20515 0.0 42.380695 4 CCGGGAT 34045 0.0 42.268173 5 ACCGGGC 30020 0.0 42.182545 4 CGGGATA 3230 0.0 42.02477 6 CGGGATC 10350 0.0 41.91691 6 CCGGGGG 75880 0.0 41.903797 5 CACCGGA 10965 0.0 41.75285 3 CCGGGAC 22315 0.0 41.752186 5 CCGGGGT 31620 0.0 41.543957 5 CCGGGGA 45430 0.0 41.506054 5 CGGGGGG 34405 0.0 41.499783 6 CGGGATT 11325 0.0 41.047237 6 CGGGAGT 13995 0.0 40.88746 6 CGGGGGA 11720 0.0 40.7901 6 >>END_MODULE