##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527833_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5523429 Sequences flagged as poor quality 0 Sequence length 52 %GC 61 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37412773840308 33.0 31.0 34.0 31.0 34.0 2 32.7027082270814 34.0 31.0 34.0 31.0 34.0 3 32.906935890730196 34.0 31.0 34.0 31.0 34.0 4 36.37881685453004 37.0 37.0 37.0 35.0 37.0 5 36.27400732407351 37.0 37.0 37.0 35.0 37.0 6 36.299942662429444 37.0 37.0 37.0 35.0 37.0 7 36.45037168034567 37.0 37.0 37.0 35.0 37.0 8 36.60049346157975 37.0 37.0 37.0 35.0 37.0 9 38.634244053829605 39.0 39.0 39.0 38.0 39.0 10 38.04082880399115 39.0 38.0 39.0 37.0 39.0 11 37.759425711817784 39.0 38.0 39.0 35.0 39.0 12 37.27052017867886 39.0 37.0 39.0 35.0 39.0 13 37.17917818804225 39.0 37.0 39.0 34.0 39.0 14 37.98307935161292 40.0 38.0 40.0 34.0 40.0 15 38.0342676623525 40.0 38.0 40.0 34.0 40.0 16 38.01328232878525 40.0 38.0 40.0 34.0 40.0 17 37.927870893244034 40.0 38.0 40.0 33.0 40.0 18 37.90880845938275 40.0 38.0 40.0 34.0 40.0 19 37.8624041333744 40.0 37.0 40.0 34.0 40.0 20 37.823173430852464 40.0 37.0 40.0 33.0 40.0 21 37.81629147401008 40.0 37.0 40.0 33.0 40.0 22 37.78974184333681 40.0 37.0 40.0 33.0 40.0 23 37.73696719918007 40.0 37.0 40.0 33.0 40.0 24 37.68755170022101 40.0 37.0 40.0 33.0 40.0 25 37.631290453810486 40.0 36.0 40.0 33.0 40.0 26 37.49748770193298 40.0 36.0 40.0 33.0 40.0 27 37.37808614902084 40.0 36.0 40.0 33.0 40.0 28 37.24805695882033 40.0 35.0 40.0 33.0 40.0 29 37.115106576005594 39.0 35.0 40.0 33.0 40.0 30 36.957909117687585 39.0 35.0 40.0 32.0 40.0 31 36.84845862959404 39.0 35.0 40.0 32.0 40.0 32 36.65895243697348 39.0 35.0 40.0 32.0 40.0 33 36.454665027829634 38.0 35.0 40.0 31.0 40.0 34 36.212306702955715 38.0 35.0 40.0 30.0 40.0 35 36.11633986786107 38.0 35.0 40.0 30.0 40.0 36 36.0510163161326 38.0 35.0 40.0 30.0 40.0 37 35.93966628339027 38.0 35.0 40.0 30.0 40.0 38 35.85188349483627 37.0 35.0 40.0 30.0 40.0 39 35.67574961133745 37.0 34.0 40.0 30.0 40.0 40 35.43348072365916 37.0 34.0 40.0 29.0 40.0 41 35.295383900109876 37.0 34.0 40.0 29.0 40.0 42 35.15755973327438 36.0 34.0 40.0 29.0 40.0 43 34.97533090404529 36.0 34.0 40.0 29.0 40.0 44 34.815917249954694 35.0 34.0 39.0 28.0 40.0 45 34.649951325526224 35.0 34.0 39.0 28.0 40.0 46 34.479146921233166 35.0 33.0 39.0 28.0 40.0 47 34.26664577384809 35.0 33.0 39.0 27.0 40.0 48 34.03862365208279 35.0 33.0 39.0 26.0 40.0 49 34.35044552939849 35.0 33.0 39.0 28.0 40.0 50 34.41969345491723 35.0 34.0 39.0 29.0 40.0 51 34.3896255387731 35.0 34.0 38.0 29.0 40.0 52 33.93952126477954 35.0 33.0 37.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 5.0 14 13.0 15 48.0 16 143.0 17 348.0 18 758.0 19 1554.0 20 2829.0 21 5227.0 22 8532.0 23 13190.0 24 18893.0 25 26360.0 26 35835.0 27 47351.0 28 60623.0 29 78131.0 30 96376.0 31 121980.0 32 162238.0 33 224894.0 34 426929.0 35 516459.0 36 717095.0 37 1027966.0 38 1382845.0 39 546807.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 99.33099529296022 0.30691079762227413 0.07632939610520928 0.285764513312292 8 99.17319476723607 0.6024880558797805 0.1132086607793818 0.11110851610476029 9 94.50824840873305 2.876709377453752 1.3120472807743162 1.3029949330388786 10 50.67947827336967 34.005180477562035 6.682062899695099 8.633278349373189 11 37.85941667757475 21.34080115812116 22.255251221659588 18.544530942644506 12 30.480250583469072 16.40843034281784 26.15263091097939 26.95868816273369 13 26.203812885075557 16.44896675597713 28.946945819345192 28.400274539602123 14 26.0352038561553 18.418920565467577 28.112319358137857 27.433556220239275 15 28.769628431903442 18.66047341243999 26.44905908992403 26.120839065732536 16 32.08403692706107 18.587764955428955 24.00396565249594 25.324232465014035 17 31.565952961466508 19.62892978256804 22.80757116638957 25.99754608957588 18 31.783299830594363 19.854767753871734 22.278859744553607 26.08307267098029 19 31.00173823181216 21.012635448016077 21.58164792197021 26.40397839820155 20 30.67547351473152 22.254744290186405 21.907061718363718 25.16272047671836 21 30.904226342006027 20.193090198135977 24.691636300566188 24.21104715929181 22 29.388320190229656 19.07425622742684 25.162521325068177 26.37490225727533 23 28.735899384241204 21.403805498359805 24.20481914404983 25.655475973349162 24 28.803683364084158 20.94047013186917 23.078236363679157 27.177610140367513 25 27.926257402783673 21.6161554715377 22.198040383971623 28.25954674170701 26 27.266703346779693 20.610964674299247 23.11078860613579 29.011543372785276 27 26.77899906018526 19.587723495676325 22.522277375159526 31.11100006897889 28 28.459259637446234 22.392195138201288 21.850502649712706 27.298042574639776 29 29.78298444679926 20.679599574829332 22.479242514025255 27.05817346434615 30 29.800383059146775 20.37022653862302 23.17640002252224 26.65299037970797 31 32.7081238846376 20.533675729334078 21.77839164765221 24.979808738376104 32 33.57892352739575 20.31627454611981 21.83478777404399 24.27001415244045 33 33.01849267909482 20.651356249894768 22.753275184672418 23.576875886337998 34 29.25715167154317 22.891939047283852 25.380664800796755 22.47024448037623 35 28.27529782676667 25.08729631538669 24.439799986566317 22.197605871280324 36 29.046050922352762 25.313297228949626 21.263258747419403 24.377393101278212 37 30.288630486605335 25.262622186326645 20.902504585466744 23.54624274160128 38 31.459479247402296 24.491706148481317 20.807310096680883 23.241504507435508 39 30.267592830468175 22.372949846915745 20.50974132192158 26.849716000694496 40 28.373624427868993 23.16667780105438 21.533217861585623 26.926479909491007 41 26.586781508370976 22.800003403682748 21.659099809194615 28.954115278751658 42 26.020430424651064 21.076255347900734 23.433848792118084 29.469465435330118 43 26.353937019920053 20.553482266179216 23.581764154115135 29.510816559785596 44 26.75792519465716 20.35147007411519 23.596139282319008 29.294465448908642 45 28.153507540334093 21.160261134885594 22.847347182339085 27.838884142441227 46 26.96922509549774 22.560840376512488 23.150383575130594 27.319550952859174 47 26.80456289019013 22.149248229677614 24.568307115018587 26.477881765113665 48 27.85588445148838 21.35052337958902 25.001715419895866 25.791876749026738 49 28.215081609630538 20.658543813996705 24.62707495651705 26.49929961985571 50 25.66952521703456 21.54049594916491 24.558838359287318 28.231140474513204 51 25.683067529246777 21.81887374672509 24.848404858648497 27.64965386537964 52 25.94008178615132 21.529995225791804 24.765105154786998 27.764817833269877 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 118.0 10 236.0 11 164.0 12 92.0 13 155.5 14 1532.5 15 2846.0 16 4895.0 17 6944.0 18 8473.5 19 10003.0 20 8683.0 21 7363.0 22 7169.0 23 6975.0 24 7794.0 25 8613.0 26 8867.0 27 9121.0 28 10966.0 29 12811.0 30 14647.5 31 16484.0 32 19790.0 33 23096.0 34 25419.0 35 27742.0 36 33288.5 37 38835.0 38 39601.0 39 51872.5 40 63378.0 41 70006.0 42 76634.0 43 82112.5 44 87591.0 45 94298.0 46 101005.0 47 116718.0 48 132431.0 49 139310.5 50 146190.0 51 170167.0 52 194144.0 53 206575.5 54 219007.0 55 231420.5 56 243834.0 57 282618.5 58 321403.0 59 336810.0 60 352217.0 61 398330.0 62 444443.0 63 503926.5 64 559762.5 65 556115.0 66 544713.5 67 533312.0 68 464337.0 69 395362.0 70 347896.0 71 300430.0 72 246677.5 73 192925.0 74 166749.0 75 140573.0 76 116844.5 77 93116.0 78 90061.5 79 87007.0 80 64920.0 81 42833.0 82 29308.5 83 15784.0 84 10648.5 85 5513.0 86 3781.5 87 2050.0 88 1325.5 89 381.0 90 161.0 91 107.5 92 54.0 93 61.5 94 69.0 95 57.5 96 46.0 97 45.0 98 44.0 99 22.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 5523429.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.62447825300777 #Duplication Level Percentage of deduplicated Percentage of total 1 68.54255869221898 5.2260124815433215 2 9.543414703052285 1.4552711572571349 3 4.213946750348269 0.9638743607208942 4 2.09029857939357 0.6374974424351724 5 1.1881088886818456 0.4529355191979981 6 0.7175932160194478 0.32827643220277125 7 0.4776967429003103 0.25495318994432414 8 0.3242053227014279 0.19775171459571225 9 0.28848453670360663 0.19795896687831036 >10 5.268017731451244 11.63683873359731 >50 4.5678256348677975 24.98747414143888 >100 2.6165677304891823 34.92045366551126 >500 0.10696756396860678 5.411328367789317 >1k 0.046724190913116484 6.449274672669375 >5k 0.004980751315611402 2.557242762961456 >10k+ 0.0026089649748440675 4.322856391256824 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGCACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 47921 0.8675951116598042 No Hit CGCACCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 30441 0.551125034828908 No Hit CGCACCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 22183 0.4016164596304216 No Hit CGCACCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 21205 0.3839100674599058 No Hit CGCACCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 20709 0.37493013850635176 No Hit CGCACCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 19596 0.3547796124472678 No Hit CGCACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 18736 0.33920957434231525 No Hit CGCACCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 18495 0.3348463427338344 No Hit CGCACCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 14894 0.26965133434321326 No Hit CGCACCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 13646 0.24705667439556114 No Hit CGCACCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 11222 0.20317089257416 No Hit CGCACCGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 9156 0.16576659173133212 No Hit CGCACCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 8709 0.15767379285585095 No Hit CGCACCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 8327 0.15075779918597668 No Hit CGCACCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCT 8248 0.14932752824377754 No Hit CGCACCGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 7730 0.13994929598986425 No Hit CGCACCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 7108 0.12868817540697997 No Hit CGCACCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 6914 0.12517586448563023 No Hit CGCACCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 6854 0.12408958275737772 No Hit CGCACCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 6765 0.12247826486046984 No Hit CGCACCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 6669 0.12074021409526582 No Hit CGCACCGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 6603 0.11954530419418807 No Hit CGCACCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 6520 0.11804261447010543 No Hit CGCACCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 6273 0.11357075468879929 No Hit CGCACCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 6258 0.11329918425673617 No Hit CGCACCGGGGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAA 6150 0.11134387714588165 No Hit CGCACCGGGGTCTCTCGGGTGGAGTCTTCTGACTGCTGGTGGAGCAGGTCTC 6039 0.10933425594861453 No Hit CGCACCGGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACCCGATTGCT 5724 0.10363127687528888 No Hit CGCACCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 5606 0.10149492280972562 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0031502170119322615 0.0 0.0 0.0 0.0 8 0.004870163081665393 0.0 0.0 0.0 0.0 9 0.00535898985937902 0.0 0.0 0.0 0.0 10 0.01236550700660767 0.0 0.0 1.8104695470875068E-5 0.0 11 0.01817711425275857 0.0 0.0 1.8104695470875068E-5 0.0 12 0.02447754827662309 0.0 0.0 1.8104695470875068E-5 0.0 13 0.03222635793815762 0.0 0.0 1.8104695470875068E-5 0.0 14 0.04256413905202728 0.0 0.0 1.8104695470875068E-5 0.0 15 0.053245909379843574 0.0 0.0 1.8104695470875068E-5 0.0 16 0.067096001415063 0.0 0.0 1.8104695470875068E-5 0.0 17 0.07978739294014642 0.0 0.0 1.8104695470875068E-5 0.0 18 0.09171838725545309 0.0 0.0 1.8104695470875068E-5 0.0 19 0.11210427435565841 0.0 0.0 1.8104695470875068E-5 0.0 20 0.12425252501661559 0.0 0.0 1.8104695470875068E-5 0.0 21 0.1354412268176164 0.0 0.0 1.8104695470875068E-5 0.0 22 0.1462497300137288 0.0 0.0 1.8104695470875068E-5 0.0 23 0.15904974971163746 0.0 0.0 1.8104695470875068E-5 0.0 24 0.1734067732200414 0.0 0.0 1.8104695470875068E-5 0.0 25 0.18598953657229955 0.0 0.0 1.8104695470875068E-5 0.0 26 0.20293553153303862 0.0 0.0 1.8104695470875068E-5 0.0 27 0.21613385453130654 0.0 0.0 1.8104695470875068E-5 0.0 28 0.23903629430196352 0.0 0.0 1.8104695470875068E-5 0.0 29 0.25134748722215855 0.0 0.0 1.8104695470875068E-5 0.0 30 0.267659817841417 0.0 0.0 1.8104695470875068E-5 0.0 31 0.28067709388497614 0.0 0.0 1.8104695470875068E-5 0.0 32 0.2949798033069675 0.0 0.0 1.8104695470875068E-5 0.0 33 0.30756256665922566 0.0 0.0 1.8104695470875068E-5 0.0 34 0.3248706555293822 0.0 0.0 1.8104695470875068E-5 0.0 35 0.3581289811093797 0.0 0.0 1.8104695470875068E-5 0.0 36 0.3737171239098031 0.0 0.0 1.8104695470875068E-5 0.0 37 0.3899751404426489 0.0 0.0 1.8104695470875068E-5 0.0 38 0.40230443805831484 0.0 0.0 1.8104695470875068E-5 0.0 39 0.4141268042007963 0.0 0.0 1.8104695470875068E-5 0.0 40 0.42683630042135057 0.0 0.0 1.8104695470875068E-5 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCACCG 564590 0.0 44.71595 1 GCACCGG 561000 0.0 44.66715 2 CACCGGG 530590 0.0 44.6237 3 ACCGGGG 274235 0.0 44.5566 4 ACCGGGT 31140 0.0 44.40462 4 ACCGGGA 183315 0.0 44.35889 4 ACCGGAT 4905 0.0 44.358818 4 CGGGATA 4560 0.0 43.88158 6 CCGGGAT 50515 0.0 43.8737 5 CCGGGGG 113385 0.0 43.845745 5 CGGGATC 15705 0.0 43.6568 6 ACCGGGC 44530 0.0 43.644737 4 CACCGGA 16930 0.0 43.554638 3 CCGGGGT 47935 0.0 43.548134 5 CGGGGGG 52010 0.0 43.505863 6 CCGGGAC 33530 0.0 43.331642 5 CCGGGGA 67395 0.0 43.21863 5 CGGGGTA 5420 0.0 42.81734 6 CGGGATT 16825 0.0 42.773853 6 CGGGAGT 20370 0.0 42.680412 6 >>END_MODULE