SRR1527831_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527831_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5299231
Sequences flagged as poor quality	0
Sequence length	50
%GC	56

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	82599	1.5586978563493459	No Hit
CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG	44708	0.8436695814921071	No Hit
CGCTTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC	20855	0.3935476675766729	No Hit
CGCTTGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT	15565	0.29372186266271466	No Hit
CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT	14448	0.2726433325892002	No Hit
CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC	10820	0.20418056884102617	No Hit
CGCTTGGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA	10105	0.19068804511447038	No Hit
CGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	9071	0.1711757800329897	No Hit
CGCTTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA	7198	0.1358310290681799	No Hit
CGCTTGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG	6378	0.12035708577338862	No Hit
CGCTTGGGGGGGGCTGGAGAGATGGCTCAACGGTTAAGAGCACTGACTGC	5635	0.10633618349530337	No Hit
CGCTTGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGAC	5605	0.10577006361866467	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCTTGG	547970	42.312172	1
GCTTGGG	545600	42.18871	2
CTTGGGG	509280	42.103596	3
TTGGGGG	253315	41.83574	4
TGGGGGG	116790	41.679253	5
TTGGGGA	201815	41.240936	4
TGGGGGA	60170	40.84461	5
TGGGGAG	66115	40.719048	5
TTGGGGC	36070	40.669807	4
TGGGGGT	43860	40.589146	5
TGGGGAC	37220	40.435787	5
TGGGGGC	37100	40.21671	5
TTGGGGT	26235	40.209644	4
CTTGGGA	20830	39.91263	3
TGGGGAA	33295	39.665413	5
TGGGGAT	71695	39.127136	5
TTGGGTA	4830	38.9441	4
TGGGGTA	7390	37.45061	5
TGGGGCA	13985	37.298534	5
TTGGGAT	6555	37.287567	4