SRR1527830_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527830_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7936902
Sequences flagged as poor quality	0
Sequence length	52
%GC	56

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC	124537	1.569088291628144	No Hit
CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT	58344	0.7350979009190236	No Hit
CGCTTGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA	31709	0.3995135633525524	No Hit
CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC	22105	0.27850917146261855	No Hit
CGCTTGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC	21217	0.26732092698133353	No Hit
CGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC	16213	0.20427365740436254	No Hit
CGCTTGGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC	14950	0.18836064751712947	No Hit
CGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT	13614	0.1715278832975385	No Hit
CGCTTGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC	10716	0.13501489624037188	No Hit
CGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT	10284	0.12957196649271968	No Hit
CGCTTGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG	9398	0.11840892076026642	No Hit
CGCTTGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACCT	8326	0.10490239138646287	No Hit
CGCTTGGGGGGGGCTGGAGAGATGGCTCAACGGTTAAGAGCACTGACTGCTC	8269	0.10418422704475878	No Hit
CGCTTGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC	8110	0.1021809265126368	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCTTGG	820175	44.2835	1
GCTTGGG	816445	44.15847	2
CTTGGGG	763150	44.07537	3
TTGGGGG	380205	43.797424	4
TGGGGGG	175205	43.475586	5
TTGGGGA	302745	43.13663	4
TGGGGGA	91145	42.815403	5
TGGGGAG	99855	42.404484	5
TGGGGAC	55735	42.33139	5
TGGGGGT	65760	42.310066	5
TTGGGGC	53265	42.24763	4
TTGGGGT	39760	42.112675	4
TGGGGGC	55925	42.023067	5
TTGGGTA	6795	41.396614	4
TGGGGAA	51375	41.129147	5
TGGGGAT	106350	40.928535	5
CTTGGGA	30785	40.628227	3
TGGGGTA	11000	39.915455	5
CCGTATA	135	39.18519	46
TGGGGCA	20215	39.116497	5